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L3_128_054G1_scaffold_62

Search features with annotation key words

Displaying items 1-30 of 101 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_054G1_scaffold_62_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

192..1910
DNA (1719bp) protein (573aa)
Putative sugar transferase EpsL {ECO:0000313|EMBL:CEF13289.1}; EC=2.-.-.- {ECO:0000313|EMBL:CEF13289.1};; TaxID=1682 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis.;"
Galactosyl transferase CpsD n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MRW3_BIFL1
rfbP; Undecaprenyl-phosphate galactosephosphotransferase
L3_128_054G1_scaffold_62_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2003..2947)
DNA (945bp) protein (315aa)
chemotaxis protein n=1 Tax=Bifidobacterium breve RepID=UPI0002E56E28
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPD76749.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L3_128_054G1_scaffold_62_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2910..3650)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C7R4_BIFBA
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAN24092.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L3_128_054G1_scaffold_62_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3651..3830)
DNA (180bp) protein (60aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y1V3_BIFBU
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE95126.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L3_128_054G1_scaffold_62_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4204..5730
DNA (1527bp) protein (509aa)
Drug resistance MFS transporter, drug:H+ antiporter-2 family n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C7R3_BIFBA
MFS transporter {ECO:0000313|EMBL:KEY33110.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
putative membrane spanning protein
L3_128_054G1_scaffold_62_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5771..7093)
DNA (1323bp) protein (441aa)
Metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GTD9_BIFLN
Metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family {ECO:0000313|EMBL:EEI81818.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
manganese transport protein
L3_128_054G1_scaffold_62_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7391..8761
DNA (1371bp) protein (457aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5XWR4_9BIFI
ATPase AAA {ECO:0000313|EMBL:KEY32165.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
Predicted ATPase (AAA+ superfamily)
L3_128_054G1_scaffold_62_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8765..9508)
DNA (744bp) protein (248aa)
Uncharacterized protein n=5 Tax=Bifidobacterium RepID=C2GTD7_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEI81816.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L3_128_054G1_scaffold_62_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9512..10381)
DNA (870bp) protein (290aa)
Aldo/keto reductase {ECO:0000313|EMBL:KFI72087.1}; EC=1.1.1.346 {ECO:0000313|EMBL:KFI72087.1};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Aldo/keto reductase n=3 Tax=Bifidobacterium longum subsp. longum RepID=F8ASU8_BIFLN
aldo/keto reductase
L3_128_054G1_scaffold_62_10
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11017..12282)
DNA (1266bp) protein (422aa)
Arabinogalactan endo-beta-1,4-galactanase {ECO:0000256|RuleBase:RU361192}; EC=3.2.1.89 {ECO:0000256|RuleBase:RU361192};; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
Possible arabinogalactan endo-beta-galactosidase or galactanase n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5MUT3_9BIFI
arabinogalactan endo-beta-galactosidase
L3_128_054G1_scaffold_62_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12239..13531)
DNA (1293bp) protein (431aa)
Arabinogalactan endo-beta-1,4-galactanase {ECO:0000256|RuleBase:RU361192}; EC=3.2.1.89 {ECO:0000256|RuleBase:RU361192};; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
Arabinogalactan endo-1,4-beta-galactosidase n=2 Tax=Bifidobacterium longum RepID=B3DTI0_BIFLD
arabinogalactan endo-beta-galactosidase or galactanase
L3_128_054G1_scaffold_62_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13560..13712)
DNA (153bp) protein (51aa)
Arabinogalactan endo-beta-1,4-galactanase {ECO:0000256|RuleBase:RU361192}; EC=3.2.1.89 {ECO:0000256|RuleBase:RU361192};; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
Possible arabinogalactan endo-beta-galactosidase or galactanase n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5MUT3_9BIFI
arabinogalactan endo-beta-galactosidase
L3_128_054G1_scaffold_62_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13908..14963)
DNA (1056bp) protein (352aa)
Transcriptional regulator, LacI family n=3 Tax=Bifidobacterium RepID=D6D9W6_BIFLN
transcriptional regulator, LacI family
Transcriptional regulator, LacI family {ECO:0000313|EMBL:KFI72089.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
L3_128_054G1_scaffold_62_14
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15007..17139)
DNA (2133bp) protein (711aa)
Beta-galactosidase (EC:3.2.1.23)
Beta-galactosidase {ECO:0000256|PIRNR:PIRNR001084}; Short=Beta-gal {ECO:0000256|PIRNR:PIRNR001084};; EC=3.2.1.23 {ECO:0000256|PIRNR:PIRNR001084};; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
Beta-galactosidase n=6 Tax=root RepID=D6D9W7_BIFLN
L3_128_054G1_scaffold_62_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17326..18318)
DNA (993bp) protein (331aa)
MalG-type ABC sugar transport system permease component n=10 Tax=Bifidobacterium RepID=B3DTI3_BIFLD
malg-type abc sugar transport system permease component
MalG-type ABC sugar transport system permease component {ECO:0000313|EMBL:ACD98452.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L3_128_054G1_scaffold_62_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18336..19283)
DNA (948bp) protein (316aa)
MalF-type ABC sugar transport systems permease component n=13 Tax=root RepID=B3DTI4_BIFLD
ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:AIW43367.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L3_128_054G1_scaffold_62_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19517..20866)
DNA (1350bp) protein (450aa)
MalE-type ABC sugar transport system periplasmic component n=14 Tax=root RepID=B3DTI5_BIFLD
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
ABC-type sugar transport system, solute-binding lipoprotein {ECO:0000313|EMBL:ESV32964.1}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
L3_128_054G1_scaffold_62_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21701..21970
DNA (270bp) protein (90aa)
Sugar (And other) transporter n=10 Tax=root RepID=D6D9X1_BIFLN
xylT; xylt
Sugar (And other) transporter {ECO:0000313|EMBL:CBK70974.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L3_128_054G1_scaffold_62_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22244..26305)
DNA (4062bp) protein (1354aa)
MdlB1 n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R072_BIFLM
mdlB1; mdlb1
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AIW43365.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L3_128_054G1_scaffold_62_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26856..27146)
DNA (291bp) protein (97aa)
Fragment of arabinose permease n=3 Tax=Bifidobacterium RepID=Q8G7K0_BIFLO
fragment of arabinose permease
Fragment of arabinose permease {ECO:0000313|EMBL:AAN24106.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L3_128_054G1_scaffold_62_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27251..29080
DNA (1830bp) protein (610aa)
Long-chain-fatty-acid CoA ligase {ECO:0000313|EMBL:KFI72092.1}; EC=6.2.1.3 {ECO:0000313|EMBL:KFI72092.1};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Putative uncharacterized protein n=1 Tax=uncultured organism RepID=D9ZDY4_9ZZZZ
fadD1; long-chain-fatty acid CoA ligase
L3_128_054G1_scaffold_62_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29056..29361)
DNA (306bp) protein (102aa)
ABC transporter ATP-binding protein n=2 Tax=root RepID=D6ZY91_BIFLJ
multidrug ABC transporter ATP-binding protein
ABC transporter related {ECO:0000313|EMBL:ACJ53200.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L3_128_054G1_scaffold_62_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29374..30597)
DNA (1224bp) protein (408aa)
ABC transporter permease component n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GUQ3_BIFLS
ABC transporter permease
Uncharacterized protein {ECO:0000313|EMBL:ACJ53199.1}; Flags: Precursor;; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L3_128_054G1_scaffold_62_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30594..30752)
DNA (159bp) protein (53aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R077_BIFLM
Permease protein of ABC transporter system
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EIJ21526.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L3_128_054G1_scaffold_62_25
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30760..31065)
DNA (306bp) protein (102aa)
Permease protein of ABC transporter system n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XXW9_BIFBU
Permease protein of ABC transporter system
Permease protein of ABC transporter system {ECO:0000313|EMBL:ABE96228.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L3_128_054G1_scaffold_62_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31192..32712)
DNA (1521bp) protein (507aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZY88_BIFLJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG99883.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L3_128_054G1_scaffold_62_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33105..33821
DNA (717bp) protein (239aa)
Peptidase C26 n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZY87_BIFLJ
peptidase C26
Peptidase C26 {ECO:0000313|EMBL:ADG99884.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L3_128_054G1_scaffold_62_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34005..35522)
DNA (1518bp) protein (506aa)
L-arabinose isomerase {ECO:0000256|HAMAP-Rule:MF_00519, ECO:0000256|SAAS:SAAS00008909}; EC=5.3.1.4 {ECO:0000256|HAMAP-Rule:MF_00519, ECO:0000256|SAAS:SAAS00008909};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
L-arabinose isomerase n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZY86_BIFLJ
araA; L-arabinose isomerase
L3_128_054G1_scaffold_62_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35727..36419)
DNA (693bp) protein (231aa)
L-ribulose-5-phosphate 4-epimerase n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZY85_BIFLJ
L-ribulose-5-phosphate 4-epimerase
L-ribulose-5-phosphate 4-epimerase {ECO:0000313|EMBL:ADG99881.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L3_128_054G1_scaffold_62_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36504..38231)
DNA (1728bp) protein (576aa)
Ribulokinase n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZY84_BIFLJ
Carbohydrate kinase, FGGY family protein {ECO:0000313|EMBL:EEI81795.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
ribulokinase
Displaying items 1-30 of 101 in total

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