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L3_128_054G1_scaffold_65

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_054G1_scaffold_65_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

270..1442
DNA (1173bp) protein (391aa)
ABC transporter substrate-binding protein n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8APE6_BIFLN
ABC transporter substrate-binding protein
ABC transporter substrate-binding protein {ECO:0000313|EMBL:AEI98476.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L3_128_054G1_scaffold_65_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1451..2098
DNA (648bp) protein (216aa)
Transcriptional regulator, LacI family n=1 Tax=Bifidobacterium longum subsp. longum 2-2B RepID=I3AVX9_BIFLN
Transcriptional regulators
Transcriptional regulators {ECO:0000313|EMBL:CBK71358.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L3_128_054G1_scaffold_65_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2495..4315
DNA (1821bp) protein (607aa)
Oligo-1,6-glucosidase n=1 Tax=Bifidobacterium longum subsp. longum 2-2B RepID=I3AVY0_BIFLN
Oligo-1,6-glucosidase {ECO:0000313|EMBL:AEI98478.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
oligo-1,6-glucosidase
L3_128_054G1_scaffold_65_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4765..5784)
DNA (1020bp) protein (340aa)
Thioredoxin reductase n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZX46_BIFLJ
thioredoxin reductase
Thioredoxin reductase {ECO:0000313|EMBL:ADH01452.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L3_128_054G1_scaffold_65_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5903..9775)
DNA (3873bp) protein (1291aa)
Uncharacterized membrane protein, putative virulence factor n=1 Tax=Bifidobacterium longum subsp. longum F8 RepID=D6DB08_BIFLN
Uncharacterized membrane protein, putative virulence factor
Uncharacterized membrane protein, putative virulence factor {ECO:0000313|EMBL:CBK71361.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L3_128_054G1_scaffold_65_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9772..12042)
DNA (2271bp) protein (757aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZX44_BIFLJ
Uncharacterized protein {ECO:0000313|EMBL:KFI73198.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
hypothetical protein
L3_128_054G1_scaffold_65_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12039..13331)
DNA (1293bp) protein (431aa)
NUDIX hydrolase n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZX43_BIFLJ
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:ADH01449.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L3_128_054G1_scaffold_65_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13418..14833
DNA (1416bp) protein (472aa)
tRNA adenylyltransferase {ECO:0000313|EMBL:KFI73196.1}; EC=2.7.7.72 {ECO:0000313|EMBL:KFI73196.1};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
tRNA adenylyltransferase n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5XXQ5_9BIFI
RNA nucleotidyltransferase
L3_128_054G1_scaffold_65_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14918..15547)
DNA (630bp) protein (210aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZX41_BIFLJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFI73195.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
L3_128_054G1_scaffold_65_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15594..16544)
DNA (951bp) protein (317aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZX40_BIFLJ
4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase
L3_128_054G1_scaffold_65_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(16541..17467)
DNA (927bp) protein (309aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZX39_BIFLJ
ksgA; dimethyladenosine transferase
L3_128_054G1_scaffold_65_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17500..18987)
DNA (1488bp) protein (496aa)
G5 domain protein n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GWU7_BIFLN
lytic transglycosylase
Lytic transglycosylase {ECO:0000313|EMBL:AIW43079.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L3_128_054G1_scaffold_65_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19467..20444)
DNA (978bp) protein (326aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum F8 RepID=D6DB15_BIFLN
DSBA oxidoreductase {ECO:0000313|EMBL:KEY32408.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
hypothetical protein
L3_128_054G1_scaffold_65_14
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20622..22922)
DNA (2301bp) protein (767aa)
Protein kinase domain n=2 Tax=Bifidobacterium RepID=R5NEI3_9BIFI
Protein kinase domain {ECO:0000313|EMBL:CCY95567.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
Protein kinase domain.
L3_128_054G1_scaffold_65_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23329..23697
DNA (369bp) protein (123aa)
Glycosyl hydrolase family 3 N-terminal domain protein n=8 Tax=Bifidobacterium longum RepID=C2GWU4_BIFLN
hypothetical protein
Glycosyl hydrolase family 3, N-terminal domain protein {ECO:0000313|EMBL:EIJ21415.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L3_128_054G1_scaffold_65_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23835..24941)
DNA (1107bp) protein (369aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum F8 RepID=D6DB18_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK71371.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L3_128_054G1_scaffold_65_17
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25134..25934)
DNA (801bp) protein (267aa)
Kch n=9 Tax=Bifidobacterium RepID=E4R1Q5_BIFLM
Potassium transport protein {ECO:0000313|EMBL:CCY95569.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
potassium transport protein
L3_128_054G1_scaffold_65_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26094..26774
DNA (681bp) protein (227aa)
Uncharacterized protein n=6 Tax=Bifidobacterium RepID=Q8G6H6_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEY33258.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L3_128_054G1_scaffold_65_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26758..27408
DNA (651bp) protein (217aa)
DNA-binding helix-turn-helix protein n=3 Tax=Bifidobacterium RepID=C2GWT9_BIFLN
hypothetical protein
Transcriptional regulator {ECO:0000313|EMBL:KFI73185.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
L3_128_054G1_scaffold_65_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27658..29319
DNA (1662bp) protein (554aa)
Beta-glucosidase-related glycosidases n=1 Tax=Bifidobacterium longum subsp. longum F8 RepID=D6DB21_BIFLN
Beta-glucosidase-related glycosidases
Beta-glucosidase-related glycosidases {ECO:0000313|EMBL:CBK71374.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L3_128_054G1_scaffold_65_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29889..30155
DNA (267bp) protein (89aa)
Ribonucleoside-diphosphate reductase class Ib glutaredoxin subunit {ECO:0000313|EMBL:CBK71375.1}; EC=1.17.4.1 {ECO:0000313|EMBL:CBK71375.1};; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
Glutaredoxin-like protein NrdH n=19 Tax=Bifidobacterium RepID=Q8G6H3_BIFLO
glutaredoxin
L3_128_054G1_scaffold_65_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30152..30610
DNA (459bp) protein (153aa)
Protein NrdI n=7 Tax=Bifidobacterium longum RepID=B3DP47_BIFLD
ribonucleotide reductase
Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L3_128_054G1_scaffold_65_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30726..32921
DNA (2196bp) protein (732aa)
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410};; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
Ribonucleoside-diphosphate reductase n=8 Tax=Bacteria RepID=B3DP48_BIFLD
ribonucleoside-diphosphate reductase subunit alpha
L3_128_054G1_scaffold_65_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33127..33216
DNA (90bp) protein (30aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=R5MV00_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIW44418.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L3_128_054G1_scaffold_65_25
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33231..34223
DNA (993bp) protein (331aa)
Ribonucleoside-diphosphate reductase subunit beta {ECO:0000256|PIRNR:PIRNR000355}; EC=1.17.4.1 {ECO:0000256|PIRNR:PIRNR000355};; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
Ribonucleoside-diphosphate reductase subunit beta n=12 Tax=Bifidobacterium RepID=D6DB25_BIFLN
ribonucleotide-diphosphate reductase subunit beta
L3_128_054G1_scaffold_65_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34287..35462
DNA (1176bp) protein (392aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:KFI73180.1}; EC=2.4.1.175 {ECO:0000313|EMBL:KFI73180.1};; EC=2.4.1.226 {ECO:0000313|EMBL:KFI73180.1};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
WcaA2 n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R1R3_BIFLM
wcaA2; wcaa2
L3_128_054G1_scaffold_65_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35822..36949
DNA (1128bp) protein (376aa)
Carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-) n=10 Tax=Bifidobacterium longum RepID=D6DB27_BIFLN
malK; malk
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EIJ21420.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L3_128_054G1_scaffold_65_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

37185..38582
DNA (1398bp) protein (466aa)
Kae1-associated kinase {ECO:0000313|EMBL:CCK33916.1}; EC=2.7.-.- {ECO:0000313|EMBL:CCK33916.1};; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZX25_BIFLJ
hypothetical protein
L3_128_054G1_scaffold_65_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(38689..39681)
DNA (993bp) protein (331aa)
rRNA methylase n=17 Tax=Bifidobacterium RepID=B3DP59_BIFLD
RNA methyltransferase
RNA methyltransferase, TrmH family, group 3 {ECO:0000313|EMBL:EEQ54756.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L3_128_054G1_scaffold_65_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

39769..41076
DNA (1308bp) protein (436aa)
Major facilitator superfamily MFS_1 n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZX23_BIFLJ
Transport protein {ECO:0000313|EMBL:KFI73172.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
permease
Displaying items 1-30 of 49 in total

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