ggKbase home page

L3_128_054G1_scaffold_115

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_054G1_scaffold_115_1
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2..103
DNA (102bp) protein (34aa)
Transposase DDE domain protein n=1 Tax=Staphylococcus aureus subsp. aureus CIG1242 RepID=H4GSG0_STAAU
IS1272-like transposase, putative
Transposase {ECO:0000313|EMBL:AEH58927.1}; Flags: Fragment;; TaxID=1280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus.;"
L3_128_054G1_scaffold_115_2
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(118..519)
DNA (402bp) protein (134aa)
YolD-like protein n=378 Tax=Staphylococcus aureus RepID=A5IU91_STAA9
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:ABD31192.1}; TaxID=93061 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus (strain NCTC 8325).;"
L3_128_054G1_scaffold_115_3
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

789..1817
DNA (1029bp) protein (343aa)
Uncharacterized protein MW1862 n=138 Tax=Staphylococcus aureus RepID=Y1862_STAAW
ykgB; hypothetical protein
Uncharacterized protein SACOL1985; TaxID=93062 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus (strain COL).;"
L3_128_054G1_scaffold_115_4
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1937..3316)
DNA (1380bp) protein (460aa)
Putative aldehyde dehydrogenase YwdH {ECO:0000313|EMBL:CEF80762.1}; EC=1.2.1.3 {ECO:0000313|EMBL:CEF80762.1};; TaxID=1280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus.;"
Aldehyde dehydrogenase n=28 Tax=Staphylococcus aureus RepID=D8HCV1_STAAF
aldA; aldehyde dehydrogenase, putative
L3_128_054G1_scaffold_115_5
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3736..4665)
DNA (930bp) protein (310aa)
ppaC; manganese-dependent inorganic pyrophosphatase (EC:3.6.1.1)
Probable manganese-dependent inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00207}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00207};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00207}; TaxID=1193576 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus CN1.;"
Probable manganese-dependent inorganic pyrophosphatase n=407 Tax=Staphylococcus aureus RepID=PPAC_STAA1
L3_128_054G1_scaffold_115_6
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4718..5278)
DNA (561bp) protein (187aa)
Nicotinamidase (EC:3.5.1.19)
Isochorismatase {ECO:0000313|EMBL:AIL58441.1}; Nicotinamidase {ECO:0000313|EMBL:CEK44956.1}; EC=3.5.1.- {ECO:0000313|EMBL:CEK44956.1};; EC=3.5.1.19 {ECO:0000313|EMBL:CEK44956.1};; Uncharacterized isochorismatase family protein PncA {ECO:0000313|EMBL:CEF80765.1}; EC=3.-.-.- {ECO:0000313|EMBL:CEF80765.1};; TaxID=1280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus.;"
Isochorismatase hydrolase n=411 Tax=Staphylococcus aureus RepID=A5IU86_STAA9
L3_128_054G1_scaffold_115_7
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5650..6747
DNA (1098bp) protein (366aa)
Uncharacterized protein n=10 Tax=Staphylococcus aureus RepID=F9KFU3_STAAU
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGU62020.1}; TaxID=1193576 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus CN1.;"
L3_128_054G1_scaffold_115_8
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6952..8514
DNA (1563bp) protein (521aa)
Sodium-dependent dicarboxylate transporter SdcS n=18 Tax=Staphylococcus aureus RepID=SDCS_STAAS
hypothetical protein
Sodium-dependent dicarboxylate transporter SdcS; Na(+)/dicarboxylate symporter; TaxID=282459 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus (strain MSSA476).;"
L3_128_054G1_scaffold_115_9
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8704..9498)
DNA (795bp) protein (265aa)
ACT domain protein {ECO:0000313|EMBL:CEK44953.1}; EC=4.2.1.51 {ECO:0000313|EMBL:CEK44953.1};; TaxID=1280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus.;"
Prephenate dehydratase n=9 Tax=Staphylococcus aureus RepID=D2UNQ3_STAAU
putative prephenate dehydratase
L3_128_054G1_scaffold_115_10
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9518..10594)
DNA (1077bp) protein (359aa)
Nitric oxide synthase oxygenase {ECO:0000256|PIRNR:PIRNR037219}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR037219};; TaxID=1280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus.;"
Nitric oxide synthase oxygenase n=328 Tax=Staphylococcus aureus RepID=NOSO_STAAC
putative oxygenase
L3_128_054G1_scaffold_115_11
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10733..12247
DNA (1515bp) protein (505aa)
Nicotinate phosphoribosyltransferase (EC:2.4.2.11)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=1193576 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus CN1.;"
Nicotinate phosphoribosyltransferase n=8 Tax=Staphylococcus aureus RepID=C5MYR9_STAA3
L3_128_054G1_scaffold_115_12
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12240..13061
DNA (822bp) protein (274aa)
nadE; NH(3)-dependent NAD(+) synthetase (EC:6.3.1.5)
NH(3)-dependent NAD(+) synthetase {ECO:0000255|HAMAP-Rule:MF_00193}; EC=6.3.1.5 {ECO:0000255|HAMAP-Rule:MF_00193};; TaxID=158878 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus (strain Mu50 / ATCC 700699).;"
NH(3)-dependent NAD(+) synthetase n=260 Tax=Staphylococcus aureus RepID=NADE_STAA1
L3_128_054G1_scaffold_115_13
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13332..13934
DNA (603bp) protein (201aa)
UPF0316 protein SA1727 n=392 Tax=Staphylococcus aureus RepID=Y1727_STAAN
putative membrane protein
UPF0316 protein SAR2004 {ECO:0000255|HAMAP-Rule:MF_01515}; TaxID=282458 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus (strain MRSA252).;"
L3_128_054G1_scaffold_115_14
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13915..14088
DNA (174bp) protein (58aa)
Uncharacterized protein n=294 Tax=Staphylococcus aureus RepID=A5IU78_STAA9
FIG01107984: hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EES95304.1}; TaxID=450394 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus USA300_TCH959.;"
L3_128_054G1_scaffold_115_15
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14380..14706)
DNA (327bp) protein (109aa)
Uncharacterized protein n=294 Tax=Staphylococcus aureus RepID=A5IU77_STAA9
Staphostatin like protein
Putative cysteine protease inhibitor (Staphostatin A) {ECO:0000313|EMBL:CKH28378.1}; Staphostatin A {ECO:0000313|EMBL:CEK44945.1}; TaxID=1280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus.;"
L3_128_054G1_scaffold_115_16
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14737..15903)
DNA (1167bp) protein (389aa)
Staphopain A; EC=3.4.22.48;; Staphylococcal cysteine proteinase A; Staphylopain A; Flags: Precursor;; TaxID=158879 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus (strain N315).;"
Staphopain A n=4 Tax=Staphylococcus aureus RepID=H0D796_STAAU
staphopain cysteine proteinase
L3_128_054G1_scaffold_115_17
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16763..18058
DNA (1296bp) protein (432aa)
purB; Adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=450394 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus USA300_TCH959.;"
Adenylosuccinate lyase n=395 Tax=Staphylococcus aureus RepID=PUR8_STAA3
L3_128_054G1_scaffold_115_18
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18167..18469
DNA (303bp) protein (101aa)
TrpR like protein, YerC/YecD n=418 Tax=Staphylococcus aureus RepID=A5IU74_STAA9
TrpR protein
His repressor {ECO:0000313|EMBL:CEK44942.1}; Uncharacterized protein {ECO:0000313|EMBL:AIL58430.1}; TaxID=1280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus.;"
L3_128_054G1_scaffold_115_19
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18641..19333
DNA (693bp) protein (231aa)
Heptaprenylglyceryl phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00112}; Short=HepGP synthase {ECO:0000256|HAMAP-Rule:MF_00112};; EC=2.5.1.n9 {ECO:0000256|HAMAP-Rule:MF_00112};; Glycerol-1-phosphate heptaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_00112}; TaxID=46170 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus.;"
Heptaprenylglyceryl phosphate synthase n=14 Tax=Staphylococcus aureus RepID=C5Q4T0_STAAU
Geranylgeranylglyceryl diphosphate synthase
L3_128_054G1_scaffold_115_20
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19330..21522
DNA (2193bp) protein (731aa)
ATP-dependent DNA helicase PcrA; EC=3.6.4.12;; TaxID=158879 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus (strain N315).;"
ATP-dependent DNA helicase PcrA n=295 Tax=Staphylococcus aureus RepID=PCRA_STAAM
ATP-dependent DNA helicase pcrA
L3_128_054G1_scaffold_115_21
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21526..23529
DNA (2004bp) protein (668aa)
DNA ligase {ECO:0000255|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000255|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000255|HAMAP-Rule:MF_01588}; TaxID=451516 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus (strain USA300 / TCH1516).;"
DNA ligase n=96 Tax=Staphylococcus aureus RepID=DNLJ_STAA3
DNA ligase
L3_128_054G1_scaffold_115_22
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23542..24741
DNA (1200bp) protein (400aa)
Lipoprotein (Pheromone) n=84 Tax=Staphylococcus aureus RepID=I0C5Q3_STAA5
putative lipoprotein
CamS sex pheromone family protein {ECO:0000313|EMBL:EFH95885.1}; TaxID=548470 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus MN8.;"
L3_128_054G1_scaffold_115_23
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24830..26368)
DNA (1539bp) protein (513aa)
Sodium/proline symporter n=275 Tax=Staphylococcus aureus RepID=PUTP_STAA1
putP; Sodium/proline symporter
Sodium/proline symporter; Proline permease; TaxID=158879 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus (strain N315).;"
L3_128_054G1_scaffold_115_24
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26735..27037
DNA (303bp) protein (101aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000255|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000255|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000255|HAMAP-Rule:MF_00122};; TaxID=282459 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus (strain MSSA476).;"
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=417 Tax=Staphylococcus aureus RepID=GATC_STAA1
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C protein
L3_128_054G1_scaffold_115_25
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27039..28496
DNA (1458bp) protein (486aa)
gatA; Glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) (EC:6.3.5.-)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000255|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000255|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000255|HAMAP-Rule:MF_00120};; TaxID=196620 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus (strain MW2).;"
Glutamyl-tRNA(Gln) amidotransferase subunit A n=255 Tax=Staphylococcus aureus RepID=GATA_STAA2
L3_128_054G1_scaffold_115_26
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

28509..29936
DNA (1428bp) protein (476aa)
gatB; Aspartyl-tRNA(Asn) amidotransferase subunit B/Glutamyl-tRNA(Gln) amidotransferase subunit B (EC:6.3.5.6)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00222465}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00121};; TaxID=46170 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus.;"
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=370 Tax=Staphylococcus aureus RepID=GATB_STAA1
L3_128_054G1_scaffold_115_27
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

30648..31595
DNA (948bp) protein (316aa)
Diacylglycerol kinase; Short=DAG kinase;; Short=DAGK;; EC=2.7.1.107;; TaxID=282459 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus (strain MSSA476).;"
Diacylglycerol kinase n=339 Tax=Staphylococcus aureus RepID=DAGK_STAA1
Transcription regulator (contains diacylglycerol kinase catalytic domain)
L3_128_054G1_scaffold_115_28
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

31676..33037
DNA (1362bp) protein (454aa)
RNA methyltransferase n=9 Tax=Staphylococcus aureus RepID=D8HCS4_STAAF
RNA methyltransferase
Strain SA-120 Contig625, whole genome shotgun sequence {ECO:0000313|EMBL:KIT97129.1}; TaxID=46170 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus.;"
L3_128_054G1_scaffold_115_29
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

33207..33737
DNA (531bp) protein (177aa)
Permease n=347 Tax=Staphylococcus aureus RepID=I0C5P5_STAA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGY90007.1}; TaxID=1406863 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus Z172.;"
L3_128_054G1_scaffold_115_30
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

33984..35054
DNA (1071bp) protein (357aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=450394 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus USA300_TCH959.;"
DNA polymerase IV n=113 Tax=Staphylococcus aureus RepID=DPO4_STAAC
ImpB/MucB/SamB family protein
Displaying items 1-30 of 35 in total

View Taxonomy