ggKbase home page

L3_128_054G1_scaffold_116

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_054G1_scaffold_116_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

131..1576
DNA (1446bp) protein (482aa)
Sulfatase family protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RHG6_CLOPF
Sulfatase family protein {ECO:0000313|EMBL:EDT26616.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
arylsulfatase
L3_128_054G1_scaffold_116_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1734..3071)
DNA (1338bp) protein (446aa)
Glycerol-3-phosphate transporter n=6 Tax=Clostridium perfringens RepID=H1CWJ0_CLOPF
glycerol-3-phosphate transporter
Putative glycerol-3-phosphate transporter {ECO:0000313|EMBL:EDT23530.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L3_128_054G1_scaffold_116_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3272..4291)
DNA (1020bp) protein (340aa)
Putative iron compound ABC transporter, iron compound-binding protein n=4 Tax=Clostridium perfringens RepID=H7CS26_CLOPF
Putative iron compound ABC transporter, iron compound-binding protein {ECO:0000313|EMBL:EDT14658.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
iron compound ABC transporter iron compound-binding protein
L3_128_054G1_scaffold_116_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4272..5060)
DNA (789bp) protein (263aa)
Uncharacterized protein n=4 Tax=Clostridium perfringens RepID=Q8XNU8_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB79940.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_128_054G1_scaffold_116_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5053..6483)
DNA (1431bp) protein (477aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
sensor histidine kinase (EC:2.7.3.-)
Sensor histidine kinase n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BH78_CLOPF
L3_128_054G1_scaffold_116_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6473..7144)
DNA (672bp) protein (224aa)
DNA-binding response regulator n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RHH1_CLOPF
DNA-binding response regulator
DNA-binding response regulator {ECO:0000313|EMBL:EDT26621.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L3_128_054G1_scaffold_116_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7436..8635
DNA (1200bp) protein (400aa)
Transporter, monovalent cation:proton antiporter-2 (CPA2) family n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BUH2_CLOPF
Transporter, monovalent cation:proton antiporter-2 (CPA2) family {ECO:0000313|EMBL:EDT14683.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
monovalent cation:proton antiporter-2 (CPA2) family protein
L3_128_054G1_scaffold_116_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8888..9415
DNA (528bp) protein (176aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CS31_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT14626.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_128_054G1_scaffold_116_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9789..10565
DNA (777bp) protein (259aa)
Uncharacterized protein n=6 Tax=Clostridium perfringens RepID=Q8XNU3_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB79945.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_128_054G1_scaffold_116_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10983..12413
DNA (1431bp) protein (477aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TUJ7_CLOP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA18522.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_128_054G1_scaffold_116_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12416..13108
DNA (693bp) protein (231aa)
Conserved domain protein n=4 Tax=Clostridium perfringens RepID=Q0TUJ6_CLOP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB79947.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_128_054G1_scaffold_116_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13166..14041)
DNA (876bp) protein (292aa)
Prenyltransferase, UbiA family n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RHH7_CLOPF
Prenyltransferase, UbiA family {ECO:0000313|EMBL:EDT26587.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase
L3_128_054G1_scaffold_116_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14034..15560)
DNA (1527bp) protein (509aa)
Putative membrane protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RHH8_CLOPF
Putative membrane protein {ECO:0000313|EMBL:EDT26644.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
L3_128_054G1_scaffold_116_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15656..15988)
DNA (333bp) protein (111aa)
Putative membrane protein n=3 Tax=Clostridium perfringens RepID=Q0TUJ3_CLOP1
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EDT14660.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_128_054G1_scaffold_116_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15981..16319)
DNA (339bp) protein (113aa)
Putative membrane protein n=7 Tax=Clostridium perfringens RepID=Q0TUJ2_CLOP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDS81644.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L3_128_054G1_scaffold_116_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16329..16964)
DNA (636bp) protein (212aa)
HAD-superfamily hydrolase, subfamily IB n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BUI1_CLOPF
HAD-superfamily hydrolase, subfamily IB {ECO:0000313|EMBL:EDT14678.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
HAD family hydrolase
L3_128_054G1_scaffold_116_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17369..19696)
DNA (2328bp) protein (776aa)
GGDEF/EAL domain protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V2I6_CLOPF
GGDEF/EAL domain protein {ECO:0000313|EMBL:EDT72002.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
diguanylate cyclase
L3_128_054G1_scaffold_116_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19950..21218
DNA (1269bp) protein (423aa)
DnaJ domain protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RRP8_CLOPF
dnaJ domain-containing protein
DnaJ domain protein {ECO:0000313|EMBL:EDT23559.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L3_128_054G1_scaffold_116_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21236..21838
DNA (603bp) protein (201aa)
Putative co-chaperone GrpE n=1 Tax=Clostridium perfringens F262 RepID=H7CS44_CLOPF
Putative co-chaperone GrpE {ECO:0000313|EMBL:EIA18533.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
co-chaperone GrpE
L3_128_054G1_scaffold_116_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21826..23553
DNA (1728bp) protein (576aa)
DnaK family protein n=4 Tax=Clostridium perfringens RepID=Q0TUI7_CLOP1
DnaK family protein {ECO:0000313|EMBL:EDT23526.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
molecular chaperone DnaK
L3_128_054G1_scaffold_116_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23571..24305
DNA (735bp) protein (245aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CWH1_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT71981.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
hypothetical protein
L3_128_054G1_scaffold_116_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24577..25350
DNA (774bp) protein (258aa)
Capsular polysaccharide biosynthesis protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BH96_CLOPF
Capsular polysaccharide biosynthesis protein {ECO:0000313|EMBL:EDS80854.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
capsular polysaccharide biosynthesis protein
L3_128_054G1_scaffold_116_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25666..26988
DNA (1323bp) protein (441aa)
Putative lipoprotein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RHC6_CLOPF
Putative lipoprotein {ECO:0000313|EMBL:EDT26622.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
lipoprotein
L3_128_054G1_scaffold_116_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27061..27507)
DNA (447bp) protein (149aa)
Uncharacterized protein n=4 Tax=Clostridium perfringens RepID=H7CS49_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA18538.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
L3_128_054G1_scaffold_116_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27627..27830
DNA (204bp) protein (68aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=Q8XNS9_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB79959.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_128_054G1_scaffold_116_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27843..28091
DNA (249bp) protein (83aa)
Uncharacterized protein n=11 Tax=Clostridium perfringens RepID=H7CS51_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDS80818.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L3_128_054G1_scaffold_116_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28176..28490)
DNA (315bp) protein (105aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=H7CS52_CLOPF
Conserved domain protein {ECO:0000313|EMBL:EDT26615.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
L3_128_054G1_scaffold_116_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28627..29358)
DNA (732bp) protein (244aa)
NAD-dependent protein deacetylase {ECO:0000256|HAMAP-Rule:MF_01968}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01968};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01968}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
NAD-dependent protein deacetylase n=2 Tax=Clostridium perfringens RepID=Q0TUH9_CLOP1
NAD-dependent deacetylase
L3_128_054G1_scaffold_116_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29528..29851
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BHA2_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDS80856.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L3_128_054G1_scaffold_116_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29885..30094
DNA (210bp) protein (70aa)
Conserved domain protein n=3 Tax=Clostridium perfringens RepID=B1BHA3_CLOPF
transcriptional regulator
Probable transcriptional regulator {ECO:0000313|EMBL:BAB79964.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
Displaying items 1-30 of 38 in total

View Taxonomy