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L3_128_070G1_scaffold_107

Search features with annotation key words

Displaying items 1-30 of 76 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_070G1_scaffold_107_1
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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3..197
DNA (195bp) protein (65aa)
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32198.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
L3_128_070G1_scaffold_107_2
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

299..1420
DNA (1122bp) protein (374aa)
glycosyltransferase, group 1 family protein (EC:2.4.-.-)
Glycosyltransferase, group 1 family protein n=2 Tax=Bifidobacterium breve RepID=D4BMN9_BIFBR
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32197.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
L3_128_070G1_scaffold_107_3
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1458..2711
DNA (1254bp) protein (418aa)
Spore coat protein {ECO:0000313|EMBL:KFI89935.1}; EC=2.4.1.56 {ECO:0000313|EMBL:KFI89935.1};; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
Spore coat protein n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A385_BIFAA
cotSA; spore coat protein
L3_128_070G1_scaffold_107_4
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2973..3875
DNA (903bp) protein (301aa)
Polysaccharide polymerase protein n=2 Tax=Bifidobacterium dentium RepID=B1SB73_9BIFI
Exopolysaccharide polymerization protein {ECO:0000313|EMBL:KFI89934.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
wzy; exopolysaccharide polymerization protein
L3_128_070G1_scaffold_107_5
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3906..4913
DNA (1008bp) protein (336aa)
Glycosyltransferase n=1 Tax=Bifidobacterium thermophilum RBL67 RepID=M4REM3_9BIFI
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32194.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
glycosyltransferase
L3_128_070G1_scaffold_107_6
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4922..5905
DNA (984bp) protein (328aa)
Glycosyl transferase CpsJ n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GV52_9BIFI
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32193.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
Glycosyltransferase
L3_128_070G1_scaffold_107_7
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5919..6926
DNA (1008bp) protein (336aa)
Glycosyl transferase, family 2 n=2 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GUM2_BIFLS
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32192.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
putative glycosyltransferase
L3_128_070G1_scaffold_107_8
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7224..8993
DNA (1770bp) protein (590aa)
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase n=1 Tax=Bifidobacterium breve RepID=UPI00030D059D
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32191.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
putative 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase
L3_128_070G1_scaffold_107_9
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9043..10449)
DNA (1407bp) protein (469aa)
Polysaccharide biosynthesis protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GV48_9BIFI
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32187.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
polysaccharide biosynthesis protein
L3_128_070G1_scaffold_107_10
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10498..11619)
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H3Z5_9BIFI
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32186.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
hypothetical protein
L3_128_070G1_scaffold_107_11
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11892..13310
DNA (1419bp) protein (473aa)
Chain length regulator (Capsular polysaccharide biosynthesis) / Tyrosine-protein kinase (Capsular polysaccharide biosynthesis) n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y1Z6_BIFBU
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32185.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
Chain length regulator (capsular polysaccharide biosynthesis) / Tyrosine-protein kinase (capsular polysaccharide biosynthesis)
L3_128_070G1_scaffold_107_12
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13343..13801
DNA (459bp) protein (153aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
rfbB; dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3AWD1_BIFLN
L3_128_070G1_scaffold_107_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13982..14440
DNA (459bp) protein (153aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8ARL1_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:KEY20664.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
hypothetical protein
L3_128_070G1_scaffold_107_14
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14919..16463
DNA (1545bp) protein (515aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8ASQ3_BIFLN
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32175.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
hypothetical protein
L3_128_070G1_scaffold_107_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16890..18647
DNA (1758bp) protein (586aa)
hypothetical protein n=1 Tax=Bifidobacterium longum RepID=UPI0000393394
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:KFI67698.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
hypothetical protein
L3_128_070G1_scaffold_107_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18997..21501
DNA (2505bp) protein (835aa)
Excinuclease ABC, subunit A n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3L1I9_BIFBR
Excinuclease ABC subunit A {ECO:0000313|EMBL:KFI67697.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Excinuclease ABC subunit A
L3_128_070G1_scaffold_107_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21673..23055
DNA (1383bp) protein (461aa)
Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps n=2 Tax=Bifidobacterium longum RepID=S3ELJ4_BIFLN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ66198.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L3_128_070G1_scaffold_107_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23048..23731
DNA (684bp) protein (228aa)
Endonuclease III {ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|PIRNR:PIRNR001435};; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
Endonuclease III n=4 Tax=Bifidobacterium longum RepID=E8MHE6_BIFL2
endonuclease III
L3_128_070G1_scaffold_107_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23904..24197)
DNA (294bp) protein (98aa)
Uncharacterized protein n=5 Tax=Bifidobacterium longum RepID=B3DT10_BIFLD
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ70694.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
L3_128_070G1_scaffold_107_20
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24219..24890
DNA (672bp) protein (224aa)
Galactoside O-acetyltransferase n=12 Tax=Bifidobacterium RepID=D6ZT89_BIFLJ
acetyltransferase
Galactoside O-acetyltransferase {ECO:0000313|EMBL:CCY96085.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L3_128_070G1_scaffold_107_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24900..25163)
DNA (264bp) protein (88aa)
Isoleucine patch superfamily acetyltransferase n=12 Tax=Bifidobacterium RepID=B3DT08_BIFLD
hypothetical protein
Nodulation protein L {ECO:0000313|EMBL:KEY32557.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L3_128_070G1_scaffold_107_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25328..26416
DNA (1089bp) protein (363aa)
Permease n=6 Tax=Bifidobacterium RepID=F8ART5_BIFLN
permease
Transporter, auxin efflux carrier (AEC) family protein {ECO:0000313|EMBL:EEQ54113.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L3_128_070G1_scaffold_107_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26504..27025
DNA (522bp) protein (174aa)
Truncated beta-glucuronidase n=2 Tax=Bifidobacterium longum RepID=E8MHF1_BIFL2
truncated beta-glucuronidase
Truncated beta-glucuronidase {ECO:0000313|EMBL:BAJ66204.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L3_128_070G1_scaffold_107_24
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27406..28716
DNA (1311bp) protein (437aa)
integrase n=1 Tax=Bifidobacterium bifidum RepID=UPI0001976766
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EFR50060.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
phage integrase
L3_128_070G1_scaffold_107_25
Bifidobacterium cuniculi, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28713..28967)
DNA (255bp) protein (85aa)
hypothetical protein n=1 Tax=Bifidobacterium bifidum RepID=UPI0001976767
Uncharacterized protein {ECO:0000313|EMBL:KFI60928.1}; TaxID=1688 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium cuniculi.;"
hypothetical protein
L3_128_070G1_scaffold_107_26
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29012..29386
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4V8W9_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EFR50061.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
L3_128_070G1_scaffold_107_27
unknown

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29383..29607
DNA (225bp) protein (75aa)

This feature has no annotations

L3_128_070G1_scaffold_107_28
Bifidobacterium cuniculi, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29597..29977)
DNA (381bp) protein (127aa)
Helix-turn-helix domain-containing protein {ECO:0000313|EMBL:KFI60929.1}; TaxID=1688 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium cuniculi.;"
L3_128_070G1_scaffold_107_29
Bifidobacterium cuniculi, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30044..30232
DNA (189bp) protein (63aa)
Uncharacterized protein {ECO:0000313|EMBL:KFI60930.1}; TaxID=1688 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium cuniculi.;"
L3_128_070G1_scaffold_107_30
Bifidobacterium cuniculi, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30258..31568
DNA (1311bp) protein (437aa)
hypothetical protein n=1 Tax=Pseudoclavibacter faecalis RepID=UPI0003659487
Integrase family protein {ECO:0000313|EMBL:KFI60931.1}; TaxID=1688 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium cuniculi.;"
Site-specific recombinase
Displaying items 1-30 of 76 in total

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