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L3_128_070G1_scaffold_208

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Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_070G1_scaffold_208_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..1880)
DNA (1878bp) protein (626aa)
Two component regulator three Y motif protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BQS3_CLOPF
Two component regulator three Y motif protein {ECO:0000313|EMBL:EDT16040.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
triple tyrosine motif-containing protein
L3_128_070G1_scaffold_208_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2253..2702)
DNA (450bp) protein (150aa)
UPF0178 protein CPE2266 n=6 Tax=Clostridium perfringens RepID=Y2266_CLOPE
hypothetical protein
UPF0178 protein CPC_2571 {ECO:0000256|HAMAP-Rule:MF_00489}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L3_128_070G1_scaffold_208_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2900..4252)
DNA (1353bp) protein (451aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
pgi; glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1RA44_CLOPF
L3_128_070G1_scaffold_208_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4282..4491)
DNA (210bp) protein (70aa)
Uncharacterized protein n=10 Tax=Clostridium perfringens RepID=H7CYX1_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT27449.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L3_128_070G1_scaffold_208_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4693..5661)
DNA (969bp) protein (323aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein n=6 Tax=Clostridium perfringens RepID=Q0TN49_CLOP1
oligopeptide/dipeptide ABC transporter ATP-binding protein
Oligopeptide ABC transporter {ECO:0000313|EMBL:BAB81975.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_128_070G1_scaffold_208_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5662..6639)
DNA (978bp) protein (326aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RPG1_CLOPF
oligopeptide ABC transporter ATPase
Oligopeptide/dipeptide ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDT15977.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_128_070G1_scaffold_208_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6653..7567)
DNA (915bp) protein (305aa)
Oligopeptide ABC transporter permease component n=10 Tax=Clostridium perfringens RepID=H7CYX4_CLOPF
appC; oligopeptide ABC transporter
Oligopeptide ABC transporter {ECO:0000313|EMBL:BAB81977.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_128_070G1_scaffold_208_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7582..8547)
DNA (966bp) protein (322aa)
Oligopeptide/dipeptide ABC transporter, permease protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SQS4_CLOPS
oligopeptide ABC transporter permease component
Oligopeptide/dipeptide ABC transporter, permease protein {ECO:0000313|EMBL:ABG87216.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L3_128_070G1_scaffold_208_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8622..10364)
DNA (1743bp) protein (581aa)
Oligopeptide/dipeptide ABC transporter, oligopeptide/dipeptide-binding protein n=2 Tax=Clostridium perfringens PF8_CLOPF">RepID=B1RPF8_CLOPF
oligopeptide/dipeptide ABC transporter oligopeptide/dipeptide-binding protein
Oligopeptide/dipeptide ABC transporter, oligopeptide/dipeptide-binding protein {ECO:0000313|EMBL:EDT22865.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L3_128_070G1_scaffold_208_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10994..12286
DNA (1293bp) protein (431aa)
Major facilitator family transporter n=1 Tax=Clostridium perfringens NCTC 8239 PF7_CLOPF">RepID=B1RPF7_CLOPF
narK; nitrate extrusion protein
Probable nitrate extrusion protein {ECO:0000313|EMBL:BAB81980.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_128_070G1_scaffold_208_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12646..14175)
DNA (1530bp) protein (510aa)
guaA; GMP synthase (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
GMP synthase [glutamine-hydrolyzing] n=8 Tax=Clostridium perfringens RepID=GUAA_CLOPE
L3_128_070G1_scaffold_208_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14282..15736)
DNA (1455bp) protein (485aa)
inosine 5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Inosine-5'-monophosphate dehydrogenase n=9 Tax=Clostridium perfringens RepID=H7CYX9_CLOPF
L3_128_070G1_scaffold_208_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16444..20472)
DNA (4029bp) protein (1343aa)
von Willebrand factor type A domain protein n=1 Tax=Clostridium perfringens NCTC 8239 PF4_CLOPF">RepID=B1RPF4_CLOPF
von Willebrand factor type A domain protein {ECO:0000313|EMBL:EDT27377.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
L3_128_070G1_scaffold_208_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20494..21081)
DNA (588bp) protein (196aa)
Prepilin peptidase-dependent n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1REZ9_CLOPF
Prepilin peptidase-dependent {ECO:0000313|EMBL:EDT27414.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
prepilin peptidase-dependent
L3_128_070G1_scaffold_208_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21108..23372)
DNA (2265bp) protein (755aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RF00_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT27416.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
L3_128_070G1_scaffold_208_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23374..24525)
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RF01_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT27481.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
L3_128_070G1_scaffold_208_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24546..25763)
DNA (1218bp) protein (406aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CUV6_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDS78984.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
hypothetical protein
L3_128_070G1_scaffold_208_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25753..26319)
DNA (567bp) protein (189aa)
Type IV pilus biogenesis protein PilN n=3 Tax=Clostridium perfringens RepID=Q0TN36_CLOP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81988.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_128_070G1_scaffold_208_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26334..27449)
DNA (1116bp) protein (372aa)
Type IV pilus assembly protein PilM n=2 Tax=Clostridium perfringens RepID=B1BMW8_CLOPF
Type IV pilus assembly protein PilM {ECO:0000313|EMBL:EDS78951.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
type IV pilus assembly protein PilM
L3_128_070G1_scaffold_208_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27580..28116)
DNA (537bp) protein (179aa)
Prepilin peptidase-dependent n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RPE5_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81990.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_128_070G1_scaffold_208_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28176..28613)
DNA (438bp) protein (146aa)
Prepilin peptidase-dependent n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BQU3_CLOPF
Prepilin peptidase-dependent {ECO:0000313|EMBL:EDT15957.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
type IV pilin
L3_128_070G1_scaffold_208_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28638..29843)
DNA (1206bp) protein (402aa)
Bacterial type II secretion system protein F n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RF08_CLOPF
Bacterial type II secretion system protein F {ECO:0000313|EMBL:EDT27381.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
type II secretion system protein F
L3_128_070G1_scaffold_208_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29870..31564)
DNA (1695bp) protein (565aa)
Secretion system protein E n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RF09_CLOPF
Secretion system protein E {ECO:0000313|EMBL:EDT27437.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
secretion system protein E
L3_128_070G1_scaffold_208_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31634..32377)
DNA (744bp) protein (248aa)
Type IV leader peptidase family protein n=4 Tax=Clostridium perfringens RepID=Q0TN29_CLOP1
Type IV leader peptidase
Type IV leader peptidase family protein {ECO:0000313|EMBL:EDT22559.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L3_128_070G1_scaffold_208_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32654..33076)
DNA (423bp) protein (141aa)
Prepilin peptidase dependent protein A n=1 Tax=Clostridium perfringens F262 RepID=H7CYZ3_CLOPF
Prepilin peptidase dependent protein A {ECO:0000313|EMBL:EIA16059.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
type IV pilin
L3_128_070G1_scaffold_208_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33741..35360)
DNA (1620bp) protein (540aa)
60 kDa chaperonin n=3 Tax=Clostridium perfringens RepID=CH60_CLOPE
groEL; molecular chaperone GroEL
60 kDa chaperonin {ECO:0000255|HAMAP-Rule:MF_00600}; GroEL protein {ECO:0000255|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000255|HAMAP-Rule:MF_00600}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_128_070G1_scaffold_208_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35415..35699)
DNA (285bp) protein (95aa)
10 kDa chaperonin n=10 Tax=Clostridium perfringens RepID=CH10_CLOP1
groES; co-chaperonin GroES
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L3_128_070G1_scaffold_208_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36070..36720
DNA (651bp) protein (217aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=Q8XI33_CLOPE
hypothetical protein
Integral membrane protein TIGR01906 {ECO:0000313|EMBL:EDS78885.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L3_128_070G1_scaffold_208_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36851..37156
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V3E0_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT71660.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
hypothetical protein
L3_128_070G1_scaffold_208_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37280..38218)
DNA (939bp) protein (313aa)
Putative 8-oxoguanine DNA glycosylase n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SQQ3_CLOPS
8-oxoguanine DNA glycosylase
Putative 8-oxoguanine DNA glycosylase {ECO:0000313|EMBL:ABG85629.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
Displaying items 1-30 of 34 in total

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