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L3_128_070G1_scaffold_255

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_070G1_scaffold_255_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..451
DNA (450bp) protein (150aa)
Lipoprotein, BMP family n=4 Tax=Clostridium perfringens RepID=Q0TQY1_CLOP1
Bmp family lipoprotein
Lipoprotein, BMP family {ECO:0000313|EMBL:EDT25637.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L3_128_070G1_scaffold_255_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1054..1569
DNA (516bp) protein (172aa)
Putative membrane protein n=3 Tax=Clostridium perfringens RepID=B1BX85_CLOPF
Putative membrane protein {ECO:0000313|EMBL:EDT13702.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L3_128_070G1_scaffold_255_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1550..2317
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V6A8_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT70647.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
hypothetical protein
L3_128_070G1_scaffold_255_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2569..3954
DNA (1386bp) protein (462aa)
rpoN; RNA polymerase factor sigma-54 (EC:2.7.7.6)
RNA polymerase sigma-54 factor n=3 Tax=Clostridium perfringens RepID=B1RTF0_CLOPF
RNA polymerase sigma-54 factor {ECO:0000313|EMBL:EDT70663.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
L3_128_070G1_scaffold_255_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4109..5215
DNA (1107bp) protein (369aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CQY6_CLOPF
transcriptional regulator
Probable transcriptional regulator {ECO:0000313|EMBL:BAB81011.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_128_070G1_scaffold_255_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5306..6304
DNA (999bp) protein (333aa)
gap; glyceraldehyde-3-phosphate dehydrogenase, type I (EC:1.2.1.-)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
Glyceraldehyde-3-phosphate dehydrogenase, type I n=10 Tax=Clostridium perfringens RepID=H7CVY4_CLOPF
L3_128_070G1_scaffold_255_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6448..7641
DNA (1194bp) protein (398aa)
pgk; phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Phosphoglycerate kinase n=11 Tax=Clostridium perfringens RepID=PGK_CLOP1
L3_128_070G1_scaffold_255_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7885..8631
DNA (747bp) protein (249aa)
tpiA; triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase {ECO:0000255|HAMAP-Rule:MF_00147}; Short=TIM {ECO:0000255|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000255|HAMAP-Rule:MF_00147};; Triose-phosphate isomerase {ECO:0000255|HAMAP-Rule:MF_00147}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
Triosephosphate isomerase n=16 Tax=Clostridium RepID=TPIS_CLOP1
L3_128_070G1_scaffold_255_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8756..10294
DNA (1539bp) protein (513aa)
pgm; phosphoglyceromutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000255|HAMAP-Rule:MF_01038}; Short=BPG-independent PGAM {ECO:0000255|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000255|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000255|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000255|HAMAP-Rule:MF_01038};; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CQY2_CLOPF
L3_128_070G1_scaffold_255_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10866..12323
DNA (1458bp) protein (486aa)
Amino acid antiporter n=5 Tax=Clostridium perfringens RepID=H7CVY0_CLOPF
Glutamate:gamma-aminobutyrate antiporter family protein {ECO:0000313|EMBL:EDT13694.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
amino acid antiporter
L3_128_070G1_scaffold_255_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12519..12659
DNA (141bp) protein (47aa)
Uncharacterized protein n=10 Tax=Clostridium perfringens RepID=H7CVX9_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT13690.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_128_070G1_scaffold_255_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13026..14321
DNA (1296bp) protein (432aa)
eno; phosphopyruvate hydratase (EC:4.2.1.11)
Enolase {ECO:0000255|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000255|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000255|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000255|HAMAP-Rule:MF_00318}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
Enolase n=8 Tax=Clostridium perfringens RepID=ENO_CLOP1
L3_128_070G1_scaffold_255_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15699..16256
DNA (558bp) protein (186aa)
Putative tryptophan transport protein n=1 Tax=Clostridium perfringens F262 RepID=H7CVX7_CLOPF
Putative tryptophan transport protein {ECO:0000313|EMBL:EIA17202.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
tryptophan transport protein
L3_128_070G1_scaffold_255_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16447..16677
DNA (231bp) protein (77aa)
Preprotein translocase subunit SecG n=5 Tax=Clostridium perfringens RepID=H7CVX6_CLOPF
secG; preprotein translocase subunit SecG
Preprotein translocase subunit SecG {ECO:0000313|EMBL:EIA17201.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_128_070G1_scaffold_255_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16966..19221
DNA (2256bp) protein (752aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
Ribonuclease R n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CQX6_CLOPF
rnr; ribonuclease R
L3_128_070G1_scaffold_255_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19836..20306
DNA (471bp) protein (157aa)
SsrA-binding protein n=11 Tax=Clostridium perfringens RepID=SSRP_CLOP1
smpB; SsrA-binding protein
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_128_070G1_scaffold_255_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20784..21392
DNA (609bp) protein (203aa)
Putative lipoprotein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BWZ8_CLOPF
Putative lipoprotein {ECO:0000313|EMBL:EDT13780.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
lipoprotein
L3_128_070G1_scaffold_255_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21672..22661)
DNA (990bp) protein (330aa)
Tetratricopeptide repeat protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BLA6_CLOPF
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EDS79426.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
hypothetical protein
L3_128_070G1_scaffold_255_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22834..23412
DNA (579bp) protein (193aa)
xpt; xanthine phosphoribosyltransferase (EC:2.4.2.22)
Xanthine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502}; Short=XPRTase {ECO:0000256|HAMAP-Rule:MF_01184};; EC=2.4.2.22 {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Xanthine phosphoribosyltransferase 2 n=11 Tax=Clostridium perfringens RepID=XPT2_CLOP1
L3_128_070G1_scaffold_255_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24736..25743
DNA (1008bp) protein (336aa)
C4-dicarboxylate transport system substrate-binding protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BLA4_CLOPF
C4-dicarboxylate transport system substrate-binding protein {ECO:0000313|EMBL:EDS79421.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
putative ATP-independent dicarboxylate transporter solute-binding protein
L3_128_070G1_scaffold_255_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25766..26278
DNA (513bp) protein (171aa)
C4-dicarboxylate transport system permease small protein n=2 Tax=Clostridium perfringens RepID=B1BLA3_CLOPF
C4-dicarboxylate transport system permease small protein {ECO:0000313|EMBL:EDS79428.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
membrane transport protein
L3_128_070G1_scaffold_255_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26304..27611
DNA (1308bp) protein (436aa)
Uncharacterized protein n=5 Tax=Clostridium perfringens RepID=H7CVW8_CLOPF
C4-dicarboxylate transport system {ECO:0000313|EMBL:EDT72961.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
tripartite ATP-independent dicarboxylate transporter large subunit 1
L3_128_070G1_scaffold_255_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27933..28766)
DNA (834bp) protein (278aa)
AraC-type sugar metabolism regulator n=1 Tax=Clostridium perfringens F262 RepID=H7CVW7_CLOPF
AraC-type sugar metabolism regulator {ECO:0000313|EMBL:EIA17192.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
AraC family transcription regulator
L3_128_070G1_scaffold_255_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28983..30347
DNA (1365bp) protein (455aa)
Sugar (Glycoside-Pentoside-Hexuronide) transporter n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CQW7_CLOPF
Glucuronide permease {ECO:0000313|EMBL:EDT13782.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
sugar (Glycoside-Pentoside-Hexuronide) transporter
L3_128_070G1_scaffold_255_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30374..31135
DNA (762bp) protein (254aa)
Alpha/beta fold family hydrolase n=2 Tax=Clostridium perfringens RepID=H7CVW5_CLOPF
Alpha/beta fold family hydrolase {ECO:0000313|EMBL:EIA17190.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
L3_128_070G1_scaffold_255_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31151..33073
DNA (1923bp) protein (641aa)
NADH oxidase {ECO:0000313|EMBL:EDT72999.1}; EC=1.-.-.- {ECO:0000313|EMBL:EDT72999.1};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
NADH oxidase n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RQE3_CLOPF
NADH:flavin oxidoreductases, Old Yellow Enzyme family
L3_128_070G1_scaffold_255_27
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(33194..33490)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Clostridium botulinum (strain H04402 065 / Type A5) RepID=E8ZNB0_CLOB0
Transposase {ECO:0000313|EMBL:CEP96049.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
hypothetical protein
Displaying 27 items

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