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L3_128_070G1_scaffold_273

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_070G1_scaffold_273_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

321..1250
DNA (930bp) protein (310aa)
ABC transporter permease n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8APE4_BIFLN
ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:AEI98474.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L3_128_070G1_scaffold_273_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1309..1734
DNA (426bp) protein (142aa)
ABC transporter, permease protein n=1 Tax=Bifidobacterium longum subsp. longum 2-2B RepID=I3AVY1_BIFLN
ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:AEI98473.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L3_128_070G1_scaffold_273_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1752..2174
DNA (423bp) protein (141aa)
ABC transporter, permease protein n=1 Tax=Bifidobacterium longum subsp. longum 2-2B RepID=I3AVY1_BIFLN
ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:KEY30890.1}; Flags: Fragment;; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L3_128_070G1_scaffold_273_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2389..2814)
DNA (426bp) protein (142aa)
Truncated transposase n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MWH4_BIFL1
ISPsy9, transposase
ISPsy9, transposase {ECO:0000313|EMBL:AHJ21683.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L3_128_070G1_scaffold_273_5
Bifidobacterium pullorum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2798..3232)
DNA (435bp) protein (145aa)
Uncharacterized protein (Fragment) n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GWV8_BIFLN
IS3 family transposase {ECO:0000313|EMBL:KFI83926.1}; TaxID=78448 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pullorum.;"
transposase
L3_128_070G1_scaffold_273_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4051..5412)
DNA (1362bp) protein (454aa)
ParB-like protein n=3 Tax=Bacteria RepID=C2GY46_BIFLN
ParB-like protein {ECO:0000313|EMBL:EEI79931.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
parB-like partition protein
L3_128_070G1_scaffold_273_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5412..6383)
DNA (972bp) protein (324aa)
Chromosome segregation ATPase n=7 Tax=Bifidobacterium RepID=D6DB01_BIFLN
chromosome segregation ATPase
Chromosome partitioning protein ParA {ECO:0000313|EMBL:KFI73202.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
L3_128_070G1_scaffold_273_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6634..7299)
DNA (666bp) protein (222aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
16S rRNA m(7)G-527 methyltransferase (EC:2.1.1.- 2.1.-.-)
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GY44_BIFLN
L3_128_070G1_scaffold_273_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7448..7981)
DNA (534bp) protein (178aa)
Predicted RNA-binding protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=D6DAZ9_BIFLN
Predicted RNA-binding protein
Predicted RNA-binding protein {ECO:0000313|EMBL:CBK71352.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L3_128_070G1_scaffold_273_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8105..9112)
DNA (1008bp) protein (336aa)
60Kd inner membrane protein n=1 Tax=Bifidobacterium longum subsp. longum 2-2B RepID=I3BA65_BIFLN
membrane protein
60 kDa inner membrane insertion protein {ECO:0000313|EMBL:ADH01457.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L3_128_070G1_scaffold_273_11
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(9815..9949)
DNA (135bp) protein (45aa)
50S ribosomal protein L34 n=6 Tax=Bifidobacterium longum RepID=D6DAZ7_BIFLN
LSU ribosomal protein L34P
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|SAAS:SAAS00020245}; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
L3_128_070G1_scaffold_273_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10268..11770
DNA (1503bp) protein (501aa)
Chromosomal replication initiator protein DnaA n=3 Tax=Bifidobacterium longum RepID=DNAA_BIFLS
chromosomal replication initiator protein DnaA
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
L3_128_070G1_scaffold_273_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12505..13629
DNA (1125bp) protein (375aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
DNA polymerase III subunit beta n=17 Tax=Bifidobacterium RepID=B3DP21_BIFLD
DNA polymerase III subunit beta
L3_128_070G1_scaffold_273_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13708..14895
DNA (1188bp) protein (396aa)
DNA replication and repair protein RecF n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZX56_BIFLJ
DNA replication and repair protein RecF
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|SAAS:SAAS00122784}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L3_128_070G1_scaffold_273_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14892..15362
DNA (471bp) protein (157aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZX57_BIFLJ
hypothetical protein
Zn-ribbon-containing RNA-binding protein {ECO:0000313|EMBL:KFI73212.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
L3_128_070G1_scaffold_273_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15495..17633
DNA (2139bp) protein (713aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=2 Tax=Bifidobacterium longum subsp. longum RepID=C2GY33_BIFLN
L3_128_070G1_scaffold_273_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


17701..20352
DNA (2652bp) protein (884aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
DNA gyrase subunit A n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3ARA5_BIFLN
DNA gyrase subunit A
L3_128_070G1_scaffold_273_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20422..20988
DNA (567bp) protein (189aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZX60_BIFLJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG99506.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L3_128_070G1_scaffold_273_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21820..23241
DNA (1422bp) protein (474aa)
Uncharacterized protein n=3 Tax=Bacteria RepID=Q8G6K9_BIFLO
AAA+ superfamily ATPase
Putative AAA+ superfamily ATPase {ECO:0000313|EMBL:ACD98874.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L3_128_070G1_scaffold_273_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23586..24932)
DNA (1347bp) protein (449aa)
Glutamate dehydrogenase n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZX62_BIFLJ
glutamate dehydrogenase
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L3_128_070G1_scaffold_273_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25323..25757)
DNA (435bp) protein (145aa)
Transcriptional regulator n=19 Tax=Bifidobacterium RepID=B3DP12_BIFLD
transcriptional regulator
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:CBK71341.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L3_128_070G1_scaffold_273_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25963..27309
DNA (1347bp) protein (449aa)
Aminotransferase, class I and II n=2 Tax=Bifidobacterium longum subsp. longum RepID=D6ZX64_BIFLJ
class I and II aminotransferase
Class I and II aminotransferase {ECO:0000313|EMBL:AEI98451.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L3_128_070G1_scaffold_273_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27820..29016
DNA (1197bp) protein (399aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZX65_BIFLJ
Uncharacterized protein {ECO:0000313|EMBL:KFI67989.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
hypothetical protein
L3_128_070G1_scaffold_273_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29065..29157)
DNA (93bp) protein (31aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GY06_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIW44427.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L3_128_070G1_scaffold_273_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29778..30212
DNA (435bp) protein (145aa)
Histidine kinase A n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZX67_BIFLJ
histidine kinase A
Histidine kinase A {ECO:0000313|EMBL:ADG99513.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L3_128_070G1_scaffold_273_26
unknown

Not on your lists

30487..30738
DNA (252bp) protein (84aa)

This feature has no annotations

L3_128_070G1_scaffold_273_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30932..31411)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GY05_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIW44428.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L3_128_070G1_scaffold_273_28
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32117..35365)
DNA (3249bp) protein (1083aa)
Alpha-glucosidase {ECO:0000313|EMBL:KFI60608.1}; EC=3.2.1.177 {ECO:0000313|EMBL:KFI60608.1};; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
Alpha-glucosidase n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8AU83_BIFLN
alpha-glucosidase
L3_128_070G1_scaffold_273_29
Bifidobacterium pullorum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35720..36547)
DNA (828bp) protein (276aa)
sugar ABC transporter permease n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B77C8D
Sugar ABC transporter, permease-like protein {ECO:0000313|EMBL:KFI80811.1}; TaxID=78448 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pullorum.;"
sugar ABC transporter permease
L3_128_070G1_scaffold_273_30
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36549..37481)
DNA (933bp) protein (311aa)
ABC transporter permease n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B4125D
ABC transporter permease {ECO:0000313|EMBL:KFI60610.1}; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
sugar ABC transporter substrate-binding protein
Displaying items 1-30 of 43 in total

View Taxonomy