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L3_128_070G1_scaffold_386

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_070G1_scaffold_386_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..184)
DNA (183bp) protein (61aa)
PRC-barrel domain-containing protein n=9 Tax=Clostridium perfringens RepID=H7CXF5_CLOPF
PRC-barrel domain-containing protein
PRC-barrel domain-containing protein {ECO:0000313|EMBL:EIA16610.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_128_070G1_scaffold_386_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(325..1137)
DNA (813bp) protein (271aa)
RNA polymerase sigma factor n=10 Tax=Clostridium perfringens RepID=Q8XJJ5_CLOPE
sigG; sporulation sigma factor SigG
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_128_070G1_scaffold_386_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1173..1880)
DNA (708bp) protein (236aa)
RNA polymerase sigma factor n=11 Tax=Clostridium perfringens RepID=H7CXF7_CLOPF
sigE; sporulation sigma factor SigE
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_128_070G1_scaffold_386_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1894..2700)
DNA (807bp) protein (269aa)
Sporulation sigma-E factor-processing peptidase {ECO:0000256|PIRNR:PIRNR018571}; EC=3.4.23.- {ECO:0000256|PIRNR:PIRNR018571};; Membrane-associated aspartic protease {ECO:0000256|PIRNR:PIRNR018571}; Stage II sporulation protein GA {ECO:0000256|PIRNR:PIRNR018571}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
Probable sporulation protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XJJ3_CLOPE
spoIIGA; sporulation factor SpoIIGA
L3_128_070G1_scaffold_386_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3105..4250)
DNA (1146bp) protein (382aa)
Cell division protein FtsZ n=7 Tax=Clostridium perfringens RepID=H7CXG0_CLOPF
ftsZ; cell division protein FtsZ
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_128_070G1_scaffold_386_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4264..5502)
DNA (1239bp) protein (413aa)
Cell division protein FtsA n=4 Tax=Clostridium perfringens RepID=Q0TPI8_CLOP1
ftsA; cell division protein FtsA
Cell division protein ftsA {ECO:0000256|PIRNR:PIRNR003101}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L3_128_070G1_scaffold_386_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5580..6632)
DNA (1053bp) protein (351aa)
Twitching motility protein PilT n=8 Tax=Clostridium perfringens RepID=H7CXG2_CLOPF
pilT; twitching motility protein PilT
Twitching motility protein PilT {ECO:0000313|EMBL:EDS80165.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L3_128_070G1_scaffold_386_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6813..7514)
DNA (702bp) protein (234aa)
RNA polymerase sigma factor n=11 Tax=Clostridium perfringens RepID=H7CXG3_CLOPF
sigK; sporulation sigma factor SigK
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L3_128_070G1_scaffold_386_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7577..9244)
DNA (1668bp) protein (556aa)
Putative penicillin-binding protein n=2 Tax=Clostridium perfringens RepID=B1BJ87_CLOPF
Putative penicillin-binding protein {ECO:0000313|EMBL:EDS80280.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
spoVD; stage V sporulation protein D
L3_128_070G1_scaffold_386_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9357..9983)
DNA (627bp) protein (209aa)
udk; uridine kinase (EC:2.7.1.48)
Uridine kinase {ECO:0000255|HAMAP-Rule:MF_00551}; EC=2.7.1.48 {ECO:0000255|HAMAP-Rule:MF_00551};; Cytidine monophosphokinase {ECO:0000255|HAMAP-Rule:MF_00551}; Uridine monophosphokinase {ECO:0000255|HAMAP-Rule:MF_00551}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
Uridine kinase n=9 Tax=Clostridium perfringens RepID=URK_CLOP1
L3_128_070G1_scaffold_386_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9983..11212)
DNA (1230bp) protein (410aa)
U32 family peptidase n=8 Tax=Clostridium perfringens RepID=H7CXG6_CLOPF
U32 family peptidase
Peptidase, U32 family {ECO:0000313|EMBL:EDT13517.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_128_070G1_scaffold_386_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11218..11862)
DNA (645bp) protein (215aa)
O-methyltransferase family protein n=8 Tax=Clostridium perfringens RepID=H7CXG7_CLOPF
O-methyltransferase
O-methyltransferase family protein {ECO:0000313|EMBL:EDT13504.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_128_070G1_scaffold_386_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11878..12942)
DNA (1065bp) protein (355aa)
Uncharacterized protein n=7 Tax=Clostridium perfringens RepID=B1BJ85_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT71548.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
hypothetical protein
L3_128_070G1_scaffold_386_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13049..14881)
DNA (1833bp) protein (611aa)
Probable GTP-binding protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XJI2_CLOPE
typA; GTP-binding protein TypA
Probable GTP-binding protein {ECO:0000313|EMBL:BAB81480.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_128_070G1_scaffold_386_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15038..16783)
DNA (1746bp) protein (582aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=Q8XJI1_CLOPE
Uncharacterized protein {ECO:0000313|EMBL:BAB81481.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
hypothetical protein
L3_128_070G1_scaffold_386_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16776..17228)
DNA (453bp) protein (151aa)
FUR family transcriptional regulator n=10 Tax=Clostridium perfringens RepID=H7CXH1_CLOPF
FUR family transcriptional regulator
Transcriptional regulator, Fur family {ECO:0000313|EMBL:EDT13506.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_128_070G1_scaffold_386_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17249..17503)
DNA (255bp) protein (85aa)
UPF0473 protein CPR_1747 n=9 Tax=Clostridium perfringens RepID=Y1747_CLOPS
hypothetical protein
UPF0473 protein HA1_10696 {ECO:0000256|HAMAP-Rule:MF_01448}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_128_070G1_scaffold_386_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17519..17932)
DNA (414bp) protein (138aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Putative Holliday junction resolvase n=10 Tax=Clostridium perfringens RepID=RUVX_CLOP1
Holliday junction resolvase-like protein
L3_128_070G1_scaffold_386_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17980..18237)
DNA (258bp) protein (86aa)
UPF0297 protein CPR_1749 n=10 Tax=Clostridium perfringens RepID=Y1749_CLOPS
hypothetical protein
UPF0297 protein AC3_2258 {ECO:0000256|HAMAP-Rule:MF_01507}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_128_070G1_scaffold_386_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(18381..21020)
DNA (2640bp) protein (880aa)
alaS; alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00036}; EC=6.1.1.7 {ECO:0000255|HAMAP-Rule:MF_00036};; Alanyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00036}; Short=AlaRS {ECO:0000255|HAMAP-Rule:MF_00036};; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
Alanine--tRNA ligase n=3 Tax=Clostridium perfringens RepID=SYA_CLOPE
Displaying 20 items

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