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L3_128_070G1_scaffold_421

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_070G1_scaffold_421_1
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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904..3285
DNA (2382bp) protein (794aa)
Stage II sporulation protein E {ECO:0000313|EMBL:AIY83357.1}; EC=3.1.3.16 {ECO:0000313|EMBL:AIY83357.1};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
spoIIE; stage II sporulation protein E (EC:3.1.3.16)
Stage II sporulation protein E n=1 Tax=Clostridium colicanis 209318 RepID=N9XXK9_9CLOT
L3_128_070G1_scaffold_421_2
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3406..4806
DNA (1401bp) protein (467aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
tRNA(Ile)-lysidine synthase n=1 Tax=Clostridium colicanis 209318 RepID=N9WBF3_9CLOT
tilS; tRNA(Ile)-lysidine synthetase
L3_128_070G1_scaffold_421_3
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4808..5347
DNA (540bp) protein (180aa)
hpt; hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:AIY85158.1}; EC=2.4.2.8 {ECO:0000313|EMBL:AIY85158.1};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Hypoxanthine phosphoribosyltransferase n=2 Tax=Clostridium botulinum E RepID=B2UXU3_CLOBA
L3_128_070G1_scaffold_421_4
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5432..7234
DNA (1803bp) protein (601aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Clostridium colicanis 209318 RepID=N9XWP1_9CLOT
hflB; ATP-dependent metallopeptidase HflB family protein
L3_128_070G1_scaffold_421_5
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7576..9246
DNA (1671bp) protein (557aa)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Formate--tetrahydrofolate ligase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QBB2_9CLOT
formate--tetrahydrofolate ligase family protein
L3_128_070G1_scaffold_421_6
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9372..10151
DNA (780bp) protein (260aa)
coaX; type III pantothenate kinase (EC:2.7.1.33)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274, ECO:0000313|EMBL:AIY84106.1}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274, ECO:0000313|EMBL:AIY84106.1};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Type III pantothenate kinase n=1 Tax=Clostridium colicanis 209318 RepID=N9XXK5_9CLOT
L3_128_070G1_scaffold_421_7
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10180..11148
DNA (969bp) protein (323aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
tRNA-dihydrouridine synthase n=1 Tax=Clostridium colicanis 209318 RepID=N9WBE9_9CLOT
TIM-barrel , nifR3 family protein
L3_128_070G1_scaffold_421_8
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11421..11903
DNA (483bp) protein (161aa)
Transcription elongation factor GreA n=1 Tax=Clostridium colicanis 209318 RepID=N9WBT8_9CLOT
greA; transcription elongation factor GreA domain protein
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_128_070G1_scaffold_421_9
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11918..13423
DNA (1506bp) protein (502aa)
lysS; lysine--tRNA ligase (EC:6.1.1.6)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Lysine--tRNA ligase n=2 Tax=Clostridium botulinum B RepID=B2TIC7_CLOBB
L3_128_070G1_scaffold_421_10
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13527..14426
DNA (900bp) protein (300aa)
Abortive infection protein (Fragment) n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PZ11_9CLOT
CAAX protease self-immunity family protein
CAAX protease self-immunity family protein {ECO:0000313|EMBL:AIY83132.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_128_070G1_scaffold_421_11
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14924..15412)
DNA (489bp) protein (163aa)
tubby C 2 family protein
Tubby C 2 family protein {ECO:0000313|EMBL:AIY82840.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_128_070G1_scaffold_421_12
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15781..17181
DNA (1401bp) protein (467aa)
glyS; glycine--tRNA ligase (EC:6.1.1.14)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Glycine--tRNA ligase n=1 Tax=Clostridium colicanis 209318 RepID=N9WBT3_9CLOT
L3_128_070G1_scaffold_421_13
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17603..18982
DNA (1380bp) protein (460aa)
murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC:6.3.2.9)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutamic acid-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00639}; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase {ECO:0000256|HAMAP-Rule:MF_00639}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=Clostridium colicanis 209318 RepID=N9XWN0_9CLOT
Displaying 13 items

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