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L3_128_070G1_scaffold_443

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_070G1_scaffold_443_1
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..1549)
DNA (1548bp) protein (516aa)
Putative K(+)-stimulated pyrophosphate-energized sodium pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129, ECO:0000313|EMBL:AIY80720.1};; Membrane-bound sodium-translocating pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; Pyrophosphate-energized inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
hppA; membrane-bound proton-translocating pyrophosphatase (EC:3.6.1.1)
Putative K(+)-stimulated pyrophosphate-energized sodium pump n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UY76_CLOBO
L3_128_070G1_scaffold_443_2
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1701..1931)
DNA (231bp) protein (77aa)
Preprotein translocase, SecG subunit n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HCU3_9CLOT
secG; preprotein translocase, SecG subunit
Preprotein translocase, SecG subunit {ECO:0000313|EMBL:AIY83699.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_128_070G1_scaffold_443_3
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2104..3396)
DNA (1293bp) protein (431aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
eno2; enolase Eno (EC:4.2.1.11)
Enolase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BWK9_9CLOT
L3_128_070G1_scaffold_443_4
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3548..4174)
DNA (627bp) protein (209aa)
Uncharacterized protein n=2 Tax=Clostridium botulinum B RepID=B2TPW6_CLOBB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY82104.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
L3_128_070G1_scaffold_443_5
unknown

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4352..4606
DNA (255bp) protein (85aa)

This feature has no annotations

L3_128_070G1_scaffold_443_6
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4749..5993)
DNA (1245bp) protein (415aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
Uncharacterized protein n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7T970_CLOSG
sensor protein resE
L3_128_070G1_scaffold_443_7
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5993..6679)
DNA (687bp) protein (229aa)
DNA-binding response regulator n=2 Tax=Clostridium botulinum RepID=B1IFA9_CLOBK
two-component response regulator
Two-component response regulator {ECO:0000313|EMBL:CDM70195.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L3_128_070G1_scaffold_443_8
unknown

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6803..7165
DNA (363bp) protein (121aa)

This feature has no annotations

L3_128_070G1_scaffold_443_9
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7252..9780)
DNA (2529bp) protein (843aa)
Putative ABC transporter, permease protein n=1 Tax=Clostridium botulinum (strain Okra / Type B1) RepID=B1IFA7_CLOBK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM70196.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L3_128_070G1_scaffold_443_10
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9792..10457)
DNA (666bp) protein (222aa)
ABC transporter ATP-binding protein n=1 Tax=Clostridium tetani (strain Massachusetts / E88) RepID=Q893J7_CLOTE
putative ABC transporter ATP-binding protein TM_0352
Putative ABC transporter ATP-binding protein TM_0352 {ECO:0000313|EMBL:CDM70197.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L3_128_070G1_scaffold_443_11
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10605..12140)
DNA (1536bp) protein (512aa)
gpmI; phosphoglyceromutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038};; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=2 Tax=Clostridium botulinum B RepID=B2TPW7_CLOBB
L3_128_070G1_scaffold_443_12
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12352..13098)
DNA (747bp) protein (249aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
tpiA; triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase n=4 Tax=Clostridium chauvoei RepID=S6FP68_9CLOT
L3_128_070G1_scaffold_443_13
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13332..14510)
DNA (1179bp) protein (393aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
pgk; phosphoglycerate kinase Pgk (EC:2.7.2.3)
Phosphoglycerate kinase n=1 Tax=Clostridium sp. CAG:265 RepID=R6KME1_9CLOT
L3_128_070G1_scaffold_443_14
Clostridium scatologenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14620..15630)
DNA (1011bp) protein (337aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=1548 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium scatologenes.;"
Glyceraldehyde-3-phosphate dehydrogenase, type I n=4 Tax=Clostridium botulinum RepID=B2TPX5_CLOBB
glyceraldehyde-3-phosphate dehydrogenase, type I
L3_128_070G1_scaffold_443_15
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15694..16731)
DNA (1038bp) protein (346aa)
Putative Transcriptional regulator n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EMV6_9CLOT
Putative Transcriptional regulator {ECO:0000313|EMBL:CDG02517.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
transcriptional regulator
L3_128_070G1_scaffold_443_16
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17056..18438)
DNA (1383bp) protein (461aa)
RNA polymerase sigma-54 factor n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H6T4_9CLOT
rpoN; RNA polymerase sigma-54 factor
RNA polymerase sigma-54 factor {ECO:0000313|EMBL:AIY84149.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Displaying 16 items

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