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L3_128_070G1_scaffold_459

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_070G1_scaffold_459_1
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..314)
DNA (312bp) protein (104aa)
Dipeptide transport ATP-binding protein DppD n=2 Tax=Clostridium butyricum RepID=M8JM79_CLOBU
Oligopeptide transport ATP-binding protein OppD {ECO:0000313|EMBL:KJZ86075.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
oligopeptide/dipeptide ABC transporter ATP-binding protein
L3_128_070G1_scaffold_459_2
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(327..1256)
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3F8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98451.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
dipeptide/oligopeptide/nickel ABC transporter permease
L3_128_070G1_scaffold_459_3
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1266..2261)
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=U6Q3D4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EJZ50484.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
dipeptide/oligopeptide/nickel ABC transporter permease
L3_128_070G1_scaffold_459_4
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2295..3929)
DNA (1635bp) protein (545aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HHC9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99805.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
extracellular solute-binding protein, family 5
L3_128_070G1_scaffold_459_5
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4236..4685
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H7Z0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98453.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L3_128_070G1_scaffold_459_6
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4743..5543)
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HGZ6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98454.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
RpiR family transcriptional regulator
L3_128_070G1_scaffold_459_7
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5792..6142)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HF39_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98455.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L3_128_070G1_scaffold_459_8
unknown

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comp(6224..6364)
DNA (141bp) protein (47aa)

This feature has no annotations

L3_128_070G1_scaffold_459_9
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6887..7129
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4B5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98456.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L3_128_070G1_scaffold_459_10
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7193..7450)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3G0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98457.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
MerR family transcriptional regulator
L3_128_070G1_scaffold_459_11
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7468..8457)
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H7Z1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98458.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L3_128_070G1_scaffold_459_12
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8808..9422)
DNA (615bp) protein (205aa)
YteA family sporulation protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HGZ7_9CLOT
YteA family sporulation protein {ECO:0000313|EMBL:EEH98459.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
dksA; putative RNA polymerase-binding protein DksA
L3_128_070G1_scaffold_459_13
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9576..10094)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HF46_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98460.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L3_128_070G1_scaffold_459_14
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10070..10336)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HF46_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98460.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L3_128_070G1_scaffold_459_15
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10568..10978)
DNA (411bp) protein (137aa)
PTS system fructose IIA component {ECO:0000313|EMBL:ACD22400.1}; PTS system, mannose-specific IIA component {ECO:0000313|EMBL:CDH92264.1}; EC=2.7.1.69 {ECO:0000313|EMBL:CDH92264.1};; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
PTS system fructose IIA component n=2 Tax=Clostridium botulinum B RepID=B2TQY0_CLOBB
PTS system fructose IIA component
L3_128_070G1_scaffold_459_16
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11076..12128)
DNA (1053bp) protein (351aa)
hypothetical protein n=1 Tax=Zymophilus raffinosivorans RepID=UPI000381E7AC
GroES-like protein {ECO:0000313|EMBL:EDS20362.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
alcohol dehydrogenase GroES domain-containing protein
L3_128_070G1_scaffold_459_17
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12163..12657)
DNA (495bp) protein (165aa)
PTS system sorbose subfamily IIB component n=2 Tax=Clostridiales RepID=B0P4V8_9CLOT
Putative sorbose-specific phosphotransferase enzyme IIB component {ECO:0000313|EMBL:EKY23715.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
PTS system, mannose-specific IIB component
L3_128_070G1_scaffold_459_18
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12654..13322)
DNA (669bp) protein (223aa)
Ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase n=1 Tax=Erysipelotrichaceae bacterium 21_3 RepID=H1AXT5_9FIRM
Putative ribulose-phosphate 3-epimerase {ECO:0000313|EMBL:CDC85823.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
L3_128_070G1_scaffold_459_19
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13394..14254)
DNA (861bp) protein (287aa)
PTS system mannose/fructose/sorbose family IID component n=2 Tax=Clostridiales RepID=B0P4V2_9CLOT
Putative fructose permease IID component {ECO:0000313|EMBL:EKY23721.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
PTS system mannose/fructose/sorbose family IID component
L3_128_070G1_scaffold_459_20
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14258..15010)
DNA (753bp) protein (251aa)
PTS system sorbose-specific iic component n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1Q7X8_9FIRM
PTS system sorbose-specific iic component {ECO:0000313|EMBL:EKY23722.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
phosphotransferase system PTS sorbose-specific IIC subunit
L3_128_070G1_scaffold_459_21
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15356..15829)
DNA (474bp) protein (158aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VPK4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENY88463.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
PTS system transporter subunit IIB
L3_128_070G1_scaffold_459_22
Pelosinus fermentans, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(15834..17144)
DNA (1311bp) protein (437aa)
LevR family transcriptional regulator (EC:2.7.1.-)
PTS system transcriptional activator n=5 Tax=Pelosinus fermentans RepID=I8RMK3_9FIRM
Sigma-54 factor interaction domain-containing protein {ECO:0000313|EMBL:EIW18877.1}; TaxID=1149862 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus fermentans B4.;"
Displaying 22 items

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