ggKbase home page

L3_128_070G1_scaffold_473

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_070G1_scaffold_473_1
unknown

Not on your lists

2..88
DNA (87bp) protein (29aa)

This feature has no annotations

L3_128_070G1_scaffold_473_2
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

534..764
DNA (231bp) protein (77aa)
Putative transposase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MLI3_CLOSA
putative transposase
Putative transposase {ECO:0000313|EMBL:AGX41669.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_128_070G1_scaffold_473_3
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1137..1964)
DNA (828bp) protein (276aa)
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
Purine nucleoside phosphorylase I, inosine and guanosine-specific n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3N5_9CLOT
inosine guanosine and xanthosine phosphorylase family protein
L3_128_070G1_scaffold_473_4
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2072..2491
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2R7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97840.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
cyclic nucleotide-binding domain-containing protein
L3_128_070G1_scaffold_473_5
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2540..2785
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2R7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97840.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
cyclic nucleotide-binding domain-containing protein
L3_128_070G1_scaffold_473_6
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3101..3916
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H7C0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97841.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L3_128_070G1_scaffold_473_7
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4118..4270
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=U6Q104_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98802.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L3_128_070G1_scaffold_473_8
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4369..5118)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HG41_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97843.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
acyl-ACP thioesterase family protein
L3_128_070G1_scaffold_473_9
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5472..5897
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HE81_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97844.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
nucleoside 2-deoxyribosyltransferase
L3_128_070G1_scaffold_473_10
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6215..7054
DNA (840bp) protein (280aa)
UPI0002D6DDA0 related cluster n=1 Tax=unknown RepID=UPI0002D6DDA0
SIS domain protein {ECO:0000313|EMBL:EEG53137.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
RpiR family transcriptional regulator
L3_128_070G1_scaffold_473_11
[Eubacterium] dolichum, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

7158..7622
DNA (465bp) protein (155aa)
Sorbose-specific phosphotransferase enzyme IIB component {ECO:0000313|EMBL:EDP10795.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EDP10795.1};; TaxID=428127 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="[Eubacterium] dolichum DSM 3991.;"
Sorbose-specific phosphotransferase enzyme IIB component n=2 Tax=Firmicutes RepID=A8RDU8_9FIRM
PTS system, mannose/fructose/sorbose family, IIB component
L3_128_070G1_scaffold_473_12
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7642..9246
DNA (1605bp) protein (535aa)
UPI00030DAAB9 related cluster n=1 Tax=unknown RepID=UPI00030DAAB9
PTS system mannose/fructose/sorbose family IID component {ECO:0000313|EMBL:EEG53135.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
PTS system mannose/fructose/sorbose family transporter subunit IID
L3_128_070G1_scaffold_473_13
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9248..9958
DNA (711bp) protein (237aa)
Putative N-acetylmannosamine-6-phosphate 2-epimerase {ECO:0000256|HAMAP-Rule:MF_01235}; EC=5.1.3.9 {ECO:0000256|HAMAP-Rule:MF_01235};; ManNAc-6-P epimerase {ECO:0000256|HAMAP-Rule:MF_01235}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
Putative N-acetylmannosamine-6-phosphate 2-epimerase n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D6A2_9CLOT
N-acetylmannosamine-6-phosphate 2-epimerase
L3_128_070G1_scaffold_473_14
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9962..10864
DNA (903bp) protein (301aa)
N-acetylmuramic acid 6-phosphate etherase {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795}; Short=MurNAc-6-P etherase {ECO:0000256|HAMAP-Rule:MF_00068};; EC=4.2.1.126 {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795};; N-acetylmuramic acid 6-phosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00068}; N-acetylmuramic acid 6-phosphate lyase {ECO:0000256|HAMAP-Rule:MF_00068}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
murQ; N-acetylmuramic acid 6-phosphate etherase (EC:4.2.-.-)
N-acetylmuramic acid 6-phosphate etherase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QLL1_9CLOT
L3_128_070G1_scaffold_473_15
[Eubacterium] dolichum, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

10864..11274
DNA (411bp) protein (137aa)
PTS system fructose IIA component family protein (EC:2.7.1.69)
PTS system fructose IIA component n=2 Tax=Firmicutes RepID=A8RFL6_9FIRM
PTS system fructose IIA component {ECO:0000313|EMBL:EDP10264.1}; TaxID=428127 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="[Eubacterium] dolichum DSM 3991.;"
L3_128_070G1_scaffold_473_16
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12364..12699
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HGC4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97998.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
rubredoxin-type Fe(Cys)4 protein
L3_128_070G1_scaffold_473_17
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12907..13257)
DNA (351bp) protein (117aa)
Putative bacteriocin transport accessory protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H7H0_9CLOT
Putative bacteriocin transport accessory protein {ECO:0000313|EMBL:EEH97997.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
bacterocin transport accessory protein
L3_128_070G1_scaffold_473_18
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13311..14759)
DNA (1449bp) protein (483aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2X2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97996.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L3_128_070G1_scaffold_473_19
Paenibacillus sp. TCA20, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15398..15547
DNA (150bp) protein (50aa)
Xylan 1,4-beta-xylosidase (EC:3.2.1.37)
glycoside hydrolase n=1 Tax=Paenibacillus sp. HW567 RepID=UPI00037CBBD3
Xylan 1,4-beta-xylosidase {ECO:0000313|EMBL:GAK40511.1}; TaxID=1499968 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. TCA20.;"
L3_128_070G1_scaffold_473_20
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16047..16214
DNA (168bp) protein (56aa)
Galactoside O-acetyltransferase n=2 Tax=Clostridium cellulovorans RepID=D9SPJ9_CLOC7
galactoside O-acetyltransferase
Galactoside O-acetyltransferase {ECO:0000313|EMBL:ADL50048.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 /; 743B).;"
Displaying 20 items

View Taxonomy