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L3_128_070G1_scaffold_556

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_070G1_scaffold_556_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(400..1023)
DNA (624bp) protein (208aa)
Uncharacterized protein n=6 Tax=Clostridium difficile RepID=C9XKL9_CLODC
Uncharacterized protein {ECO:0000313|EMBL:EFH14205.1}; TaxID=525258 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile NAP07.;"
hypothetical protein
L3_128_070G1_scaffold_556_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1130..2380)
DNA (1251bp) protein (417aa)
Major Facilitator Superfamily protein n=9 Tax=Clostridium difficile RepID=T2V4X0_CLODI
efflux protein
Efflux protein {ECO:0000313|EMBL:CKH66538.1}; Putative efflux protein {ECO:0000313|EMBL:CDS83875.1}; Transporter, Major Facilitator Superfamily (MFS) {ECO:0000313|EMBL:CDS83770.1}; Transporter, Major Facilitator Superfamily(MFS) {ECO:0000313|EMBL:CEJ97110.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L3_128_070G1_scaffold_556_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2671..3249)
DNA (579bp) protein (193aa)
Transcriptional regulator, TetR family n=60 Tax=Clostridium difficile RepID=Q189C5_CLOD6
Transcriptional regulator, TetR family
Transcriptional regulator, TetR family {ECO:0000313|EMBL:CEJ97111.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L3_128_070G1_scaffold_556_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3590..5050
DNA (1461bp) protein (487aa)
gapN; Glyceraldehyde-3-phosphate dehydrogenase(NADP(+)) (GADPH) (EC:1.2.1.9)
Glyceraldehyde-3-phosphate dehydrogenase(NADP(+)) (GADPH) {ECO:0000313|EMBL:CEJ97112.1}; EC=1.2.1.9 {ECO:0000313|EMBL:CEJ97112.1};; NADP-dependent glyceraldehyde-3-phosphate dehydrogenase {ECO:0000313|EMBL:CKH66480.1}; EC=1.2.1.9 {ECO:0000313|EMBL:CKH66480.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Glyceraldehyde-3-phosphate dehydrogenase (NADP(+)) (GADPH) n=141 Tax=Clostridium difficile RepID=Q189C4_CLOD6
L3_128_070G1_scaffold_556_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5440..6045
DNA (606bp) protein (202aa)
Bacterial regulatory s, tetR family protein n=61 Tax=Clostridium difficile RepID=T2VF30_CLODI
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EHJ28309.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
L3_128_070G1_scaffold_556_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6048..8615
DNA (2568bp) protein (856aa)
Putative pyruvate phosphate dikinase,PEP/pyruvate-binding {ECO:0000313|EMBL:CCL24765.1}; EC=2.7.-.- {ECO:0000313|EMBL:CCL24765.1};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
putative pyruvate phosphatedikinase,PEP/pyruvate-binding (EC:2.7.-.-)
Pyruvate phosphate dikinase, PEP/pyruvate binding domain protein n=2 Tax=Clostridium difficile RepID=T4PVG7_CLODI
L3_128_070G1_scaffold_556_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8875..9024)
DNA (150bp) protein (50aa)
Uncharacterized protein n=58 Tax=Clostridium difficile RepID=G6BV89_CLODI
EAL domain protein {ECO:0000313|EMBL:EQI92775.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
signaling protein
L3_128_070G1_scaffold_556_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9039..9185)
DNA (147bp) protein (49aa)
Putative signaling protein n=1 Tax=Clostridium difficile CD002 RepID=U3VVZ8_CLODI
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:EFH08541.1}; TaxID=525259 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile NAP08.;"
two-component hybrid sensor kinase/response regulator
L3_128_070G1_scaffold_556_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9233..10462)
DNA (1230bp) protein (410aa)
Diguanylate cyclase domain protein n=2 Tax=Clostridium difficile RepID=T4PWH3_CLODI
Diguanylate cyclase domain protein {ECO:0000313|EMBL:EQE69474.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
putative diguanylate kinase signaling protein
L3_128_070G1_scaffold_556_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10464..11642)
DNA (1179bp) protein (393aa)
Diguanylate cyclase domain protein n=2 Tax=Clostridium difficile RepID=T4PVM8_CLODI
Diguanylate cyclase domain protein {ECO:0000313|EMBL:EQG77461.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
putative diguanylate kinase signaling protein
Displaying 10 items

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