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L3_128_070G1_scaffold_248

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Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_070G1_scaffold_248_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..77)
DNA (75bp) protein (25aa)
50S ribosomal protein L21 n=2 Tax=Pantoea RepID=J2M191_9ENTR
rplU; 50S ribosomal protein L21
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=869678 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 99.0741.;"
L3_128_070G1_scaffold_248_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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336..1307
DNA (972bp) protein (324aa)
Octaprenyl-diphosphate synthase n=2 Tax=Escherichia coli RepID=S0TS87_ECOLX
Octaprenyl-diphosphate synthase {ECO:0000313|EMBL:EQV94140.1}; TaxID=1281168 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KOEGE 71 (186a).;"
ispB; octaprenyl diphosphate synthase
L3_128_070G1_scaffold_248_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1534..1812
DNA (279bp) protein (93aa)
Sugar fermentation stimulation protein B n=1131 Tax=Enterobacteriaceae RepID=SFSB_ECO57
transcriptional regulator Nlp
Winged helix-turn-helix DNA-binding family protein {ECO:0000313|EMBL:KEN87669.1}; TaxID=1444123 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C1.;"
L3_128_070G1_scaffold_248_4
Escherichia sp. KTE31, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1860..3119)
DNA (1260bp) protein (420aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=1169349 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE31.;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=4 Tax=Escherichia RepID=R8XDW0_ECOLX
L3_128_070G1_scaffold_248_5
Escherichia sp. KTE31, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3174..3443)
DNA (270bp) protein (90aa)
Transcriptional regulator n=4 Tax=Escherichia RepID=R8XI28_ECOLX
Transcriptional regulator {ECO:0000313|EMBL:EOU82552.1}; TaxID=1169349 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE31.;"
hypothetical protein
L3_128_070G1_scaffold_248_6
Escherichia sp. KTE114, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3588..3881)
DNA (294bp) protein (98aa)
Uncharacterized protein n=4 Tax=Escherichia coli RepID=R8XCZ9_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EOU45961.1}; TaxID=1169321 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE114.;"
hypothetical protein
L3_128_070G1_scaffold_248_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3881..4516)
DNA (636bp) protein (212aa)
Protein yrbC n=601 Tax=Enterobacteriaceae RepID=C3SSD2_ECOLX
ttg2D; toluene tolerance protein Ttg2D
MlaC {ECO:0000313|EMBL:EHU41416.1}; TaxID=868141 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2D.;"
L3_128_070G1_scaffold_248_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4535..5086)
DNA (552bp) protein (184aa)
ABC-type organic solvent transporter n=5 Tax=Enterobacteriaceae RepID=R8XCU2_ECOLX
ABC-type organic solvent transporter {ECO:0000313|EMBL:EQV94134.1}; TaxID=1281168 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KOEGE 71 (186a).;"
hypothetical protein
L3_128_070G1_scaffold_248_9
Shigella dysenteriae, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5091..5873)
DNA (783bp) protein (261aa)
Uncharacterized protein n=12 Tax=Enterobacteriaceae RepID=Q32BD9_SHIDS
Toluene transport system permease
Uncharacterized protein {ECO:0000313|EMBL:ABB63366.1}; TaxID=300267 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella dysenteriae serotype 1 (strain Sd197).;"
L3_128_070G1_scaffold_248_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5881..6690)
DNA (810bp) protein (270aa)
Probable phospholipid import ATP-binding protein MlaF n=1316 Tax=Enterobacteriaceae RepID=MLAF_ECO57
yrbF; ABC transporter ATP-binding protein
Uncharacterized protein {ECO:0000313|EMBL:EHP65806.1}; TaxID=1127356 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 4_1_47FAA.;"
L3_128_070G1_scaffold_248_11
Escherichia sp. KTE114, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6899..7876
DNA (978bp) protein (326aa)
Inner membrane protein yrbG n=3 Tax=Escherichia coli RepID=R8XD03_ECOLX
Inner membrane protein yrbG {ECO:0000313|EMBL:EOU45956.1}; TaxID=1169321 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE114.;"
yrbG; calcium/sodium:proton antiporter
L3_128_070G1_scaffold_248_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7890..8876
DNA (987bp) protein (329aa)
Arabinose 5-phosphate isomerase {ECO:0000256|PIRNR:PIRNR004692}; Short=API {ECO:0000256|PIRNR:PIRNR004692};; EC=5.3.1.13 {ECO:0000256|PIRNR:PIRNR004692};; TaxID=1444161 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-176-05_S3_C2.;"
Arabinose 5-phosphate isomerase n=4 Tax=Escherichia coli RepID=R8XDH0_ECOLX
kdsD; D-arabinose 5-phosphate isomerase
L3_128_070G1_scaffold_248_13
Escherichia sp. KTE114, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8897..9463
DNA (567bp) protein (189aa)
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC:3.1.3.45)
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase n=2 Tax=Escherichia coli RepID=S0U904_ECOLX
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase {ECO:0000313|EMBL:EOU45954.1}; TaxID=1169321 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE114.;"
L3_128_070G1_scaffold_248_14
Escherichia sp. KTE114, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9460..10035
DNA (576bp) protein (192aa)
Lipopolysaccharide export system protein LptC n=8 Tax=Escherichia coli RepID=L2VLA3_ECOLX
Lipopolysaccharide export system protein LptC {ECO:0000256|HAMAP-Rule:MF_01915, ECO:0000256|PIRNR:PIRNR028513}; TaxID=1169321 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE114.;"
hypothetical protein
L3_128_070G1_scaffold_248_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10004..10561
DNA (558bp) protein (186aa)
Lipopolysaccharide export system protein LptA n=1259 Tax=Enterobacteriaceae RepID=LPTA_ECO57
lptA; periplasmic LPS-binding protein
Lipopolysaccharide export system protein LptA {ECO:0000256|HAMAP-Rule:MF_01914}; Flags: Precursor;; TaxID=1433131 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli IS1.;"
L3_128_070G1_scaffold_248_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10568..11293
DNA (726bp) protein (242aa)
Lipopolysaccharide export system ATP-binding protein LptB n=1395 Tax=Enterobacteriaceae RepID=LPTB_ECO57
lptB; transporter subunit: ATP-binding component of ABC superfamily
Lipopolysaccharide export system ATP-binding protein LptB {ECO:0000313|EMBL:EOV55143.1}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE64.;"
L3_128_070G1_scaffold_248_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11341..12774
DNA (1434bp) protein (478aa)
rpoN; RNA polymerase factor sigma-54 (EC:2.7.7.6)
RNA polymerase sigma-54 factor n=2 Tax=Escherichia RepID=T8JMH4_ECOLX
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=1281168 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KOEGE 71 (186a).;"
L3_128_070G1_scaffold_248_18
Escherichia sp. KTE11, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12797..13084
DNA (288bp) protein (96aa)
Ribosomal subunit interface protein n=9 Tax=Escherichia RepID=B1EFI6_9ESCH
Ribosomal subunit interface protein {ECO:0000313|EMBL:ELC16265.1}; TaxID=1169331 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE11.;"
raiA; putative sigma(54) modulation protein (ORF95) RaiA
L3_128_070G1_scaffold_248_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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13202..13693
DNA (492bp) protein (164aa)
Nitrogen regulatory protein n=731 Tax=Enterobacteriaceae RepID=PTSN_ECOLI
PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN
Nitrogen regulatory protein (Enzyme IIA-NTR)(Phosphotransferase enzyme IIA component) (PTS system EIIA component) {ECO:0000313|EMBL:EGI20267.1}; TaxID=656419 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M718.;"
L3_128_070G1_scaffold_248_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13739..14593
DNA (855bp) protein (285aa)
UPF0042 nucleotide-binding protein YhbJ n=1396 Tax=Enterobacteriaceae RepID=YHBJ_ECO24
hypothetical protein
RNase adapter protein RapZ {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
L3_128_070G1_scaffold_248_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14590..14862
DNA (273bp) protein (91aa)
Phosphocarrier protein NPr n=1436 Tax=Enterobacteriaceae RepID=PTSO_ECO57
npr; phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system
Phosphocarrier, HPr family protein {ECO:0000313|EMBL:EHU36516.1}; TaxID=868139 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2B.;"
L3_128_070G1_scaffold_248_22
Escherichia sp. KTE114, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15085..15717
DNA (633bp) protein (211aa)
Uncharacterized protein n=4 Tax=Escherichia coli RepID=R8XDH9_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EOU45945.1}; TaxID=1169321 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE114.;"
hypothetical protein
L3_128_070G1_scaffold_248_23
Escherichia sp. KTE114, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15714..16442)
DNA (729bp) protein (243aa)
Monofunctional biosynthetic peptidoglycan transglycosylase {ECO:0000256|HAMAP-Rule:MF_00766, ECO:0000256|SAAS:SAAS00055690}; Short=Monofunctional TGase {ECO:0000256|HAMAP-Rule:MF_00766};; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00766, ECO:0000256|SAAS:SAAS00055699};; TaxID=1169321 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE114.;"
Monofunctional biosynthetic peptidoglycan transglycosylase (EC:2.4.2.-)
Monofunctional biosynthetic peptidoglycan transglycosylase n=4 Tax=Escherichia coli RepID=R8XCV1_ECOLX
L3_128_070G1_scaffold_248_24
Escherichia sp. KTE114, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16439..17092)
DNA (654bp) protein (218aa)
Enhancing lycopene biosynthesis protein 2 n=1 Tax=Escherichia coli KTE114 RepID=S0TSY3_ECOLX
Enhancing lycopene biosynthesis protein 2 {ECO:0000313|EMBL:EOU45943.1}; TaxID=1169321 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE114.;"
elbB; isoprenoid biosynthesis protein with amidotransferase-like domain
L3_128_070G1_scaffold_248_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17322..19658)
DNA (2337bp) protein (779aa)
Aerobic respiration control sensor protein ArcB n=3 Tax=Escherichia coli RepID=R8XI41_ECOLX
Aerobic respiration control sensor protein ArcB {ECO:0000313|EMBL:EQV94117.1}; TaxID=1281168 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KOEGE 71 (186a).;"
arcB; aerobic respiration control sensor protein arcB
L3_128_070G1_scaffold_248_26
Escherichia sp. KTE114, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19754..20683)
DNA (930bp) protein (310aa)
Fe-S oxidoreductase n=2 Tax=Escherichia RepID=S0U2B0_ECOLX
Fe-S oxidoreductase {ECO:0000313|EMBL:EOU45941.1}; TaxID=1169321 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE114.;"
yhcC; putative Fe-S oxidoreductase
L3_128_070G1_scaffold_248_27
Escherichia sp. KTE114, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21266..25819
DNA (4554bp) protein (1518aa)
gltB; Glutamate synthase [NADPH] large chain (EC:1.4.1.13)
Glutamate synthase [NADPH] large chain n=1 Tax=Escherichia coli KTE114 RepID=S0TS72_ECOLX
Glutamate synthase [NADPH] large chain {ECO:0000313|EMBL:EOU45940.1}; TaxID=1169321 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE114.;"
L3_128_070G1_scaffold_248_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25832..27250
DNA (1419bp) protein (473aa)
Glutamate synthase [NADPH] small chain n=1 Tax=Escherichia coli KOEGE 71 (186a) RepID=T8K9K9_ECOLX
Glutamate synthase [NADPH] small chain {ECO:0000313|EMBL:EQV94114.1}; TaxID=1281168 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KOEGE 71 (186a).;"
gltD; glutamate synthase (NADPH) small subunit
L3_128_070G1_scaffold_248_29
Escherichia sp. KTE31, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27317..27781)
DNA (465bp) protein (155aa)
Uncharacterized protein n=2 Tax=Escherichia coli RepID=R8XDY3_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EOU82528.1}; TaxID=1169349 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE31.;"
hypothetical protein
L3_128_070G1_scaffold_248_30
Escherichia sp. KTE114, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27778..28653)
DNA (876bp) protein (292aa)
N-acetylmannosamine kinase {ECO:0000256|HAMAP-Rule:MF_01234, ECO:0000256|SAAS:SAAS00009893}; EC=2.7.1.60 {ECO:0000256|HAMAP-Rule:MF_01234, ECO:0000256|SAAS:SAAS00009886};; ManNAc kinase {ECO:0000256|HAMAP-Rule:MF_01234}; N-acetyl-D-mannosamine kinase {ECO:0000256|HAMAP-Rule:MF_01234}; TaxID=1169321 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE114.;"
N-acetylmannosamine kinase n=1 Tax=Escherichia coli KTE114 RepID=S0U2A3_ECOLX
nanK; N-acetylmannosamine kinase
Displaying items 1-30 of 37 in total

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