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L3_128_070G1_scaffold_425

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_070G1_scaffold_425_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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227..919
DNA (693bp) protein (231aa)
Transcriptional regulator n=4 Tax=Escherichia coli RepID=R8WVY0_ECOLX
Transcriptional regulator {ECO:0000313|EMBL:EOQ49003.1}; TaxID=1169351 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE33.;"
GntR family transcriptional regulator
L3_128_070G1_scaffold_425_2
Escherichia sp. KTE114, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1165..2157)
DNA (993bp) protein (331aa)
Ribose operon repressor n=3 Tax=Enterobacteriaceae RepID=S0TUI6_ECOLX
Ribose operon repressor {ECO:0000313|EMBL:EOU46770.1}; TaxID=1169321 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE114.;"
transcriptional repressor RbsR
L3_128_070G1_scaffold_425_3
Escherichia sp. KTE31, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2161..3090)
DNA (930bp) protein (310aa)
rbsK; ribokinase (EC:2.7.1.15)
Ribokinase n=2 Tax=Escherichia coli RepID=R8WVT6_ECOLX
Ribokinase {ECO:0000313|EMBL:EOU76560.1}; TaxID=1169349 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE31.;"
L3_128_070G1_scaffold_425_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3216..4106)
DNA (891bp) protein (297aa)
D-ribose periplasmic binding protein n=1147 Tax=Enterobacteriaceae RepID=C3SL12_ECOLX
D-ribose transporter subunit RbsB
D-ribose-binding periplasmic protein {ECO:0000313|EMBL:ELI20803.1}; TaxID=1169376 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE112.;"
L3_128_070G1_scaffold_425_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4131..5096)
DNA (966bp) protein (322aa)
Ribose transport system permease protein RbsC n=1343 Tax=Enterobacteriaceae RepID=RBSC_ECO57
rbsC; high-affinity ribose transport system permease protein RbsC
Branched-chain amino acid transport system / permease component family protein {ECO:0000313|EMBL:KDY60301.1}; TaxID=1444184 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-460-02_S3_C3.;"
L3_128_070G1_scaffold_425_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5101..6606)
DNA (1506bp) protein (502aa)
Ribose import ATP-binding protein RbsA {ECO:0000256|HAMAP-Rule:MF_01716}; EC=3.6.3.17 {ECO:0000256|HAMAP-Rule:MF_01716};; TaxID=1444161 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-176-05_S3_C2.;"
Ribose import ATP-binding protein RbsA n=1 Tax=Escherichia coli KTE114 RepID=S0U4R0_ECOLX
rbsA; D-ribose transporter ATP-binding protein
L3_128_070G1_scaffold_425_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6614..7033)
DNA (420bp) protein (140aa)
D-ribose pyranase {ECO:0000256|HAMAP-Rule:MF_01661, ECO:0000256|SAAS:SAAS00011477}; EC=5.4.99.62 {ECO:0000256|HAMAP-Rule:MF_01661, ECO:0000256|SAAS:SAAS00166232};; TaxID=1169351 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE33.;"
D-ribose pyranase n=1 Tax=Escherichia sp. TW09231 RepID=UPI0002BB8E45
rbsD; D-ribose high-affinity transport system; membrane-associated protein,D-ribose pyranase,D-ribose pyranase,ABC-type ribose transport system, auxiliary component,RbsD / FucU transport protein family
L3_128_070G1_scaffold_425_8
Escherichia sp. KTE114, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7197..9065)
DNA (1869bp) protein (623aa)
Low affinity potassium transport system protein kup n=4 Tax=Escherichia coli RepID=R8WVT9_ECOLX
Low affinity potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; Kup system potassium uptake protein {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=1169321 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE114.;"
potassium uptake protein
L3_128_070G1_scaffold_425_9
Escherichia sp. KTE31, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9288..10784
DNA (1497bp) protein (499aa)
ATPase RavA {ECO:0000256|HAMAP-Rule:MF_01625}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01625};; Regulatory ATPase variant A {ECO:0000256|HAMAP-Rule:MF_01625}; TaxID=1169349 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE31.;"
ATPase RavA n=3 Tax=Escherichia coli RepID=R8WWR1_ECOLX
ravA; regulatory ATPase RavA
L3_128_070G1_scaffold_425_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10778..12229
DNA (1452bp) protein (484aa)
Protein ViaA n=1 Tax=Escherichia coli KOEGE 71 (186a) RepID=T8J1W2_ECOLX
Protein ViaA {ECO:0000256|HAMAP-Rule:MF_01626, ECO:0000256|SAAS:SAAS00012203}; VWA domain protein interacting with AAA ATPase {ECO:0000256|HAMAP-Rule:MF_01626}; TaxID=1281168 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KOEGE 71 (186a).;"
hypothetical protein
L3_128_070G1_scaffold_425_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12234..13226)
DNA (993bp) protein (331aa)
Aspartate--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088413}; EC=6.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088403};; Asparagine synthetase A {ECO:0000256|HAMAP-Rule:MF_00555}; TaxID=1169351 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE33.;"
asnA; asparagine synthetase A (EC:6.3.1.1)
Aspartate--ammonia ligase n=2 Tax=Escherichia coli RepID=R8WVY8_ECOLX
L3_128_070G1_scaffold_425_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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13378..13836
DNA (459bp) protein (153aa)
Regulatory protein AsnC n=1413 Tax=Enterobacteriaceae RepID=ASNC_ECO57
hypothetical protein
Regulatory protein AsnC {ECO:0000313|EMBL:KEJ54808.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
L3_128_070G1_scaffold_425_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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13926..14369
DNA (444bp) protein (148aa)
FMN-binding protein MioC n=1 Tax=Escherichia sp. TW11588 RepID=UPI0002BC76D5
Protein mioC {ECO:0000313|EMBL:EYD81208.1}; TaxID=1444161 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-176-05_S3_C2.;"
FMN-binding protein MioC
L3_128_070G1_scaffold_425_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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14748..16637
DNA (1890bp) protein (630aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=3 Tax=Escherichia coli RepID=R8WWR6_ECOLX
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=1446580 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O123:H11 str. 2009C-3307.;"
glucose inhibited division protein A
L3_128_070G1_scaffold_425_15
Escherichia sp. KTE31, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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16701..17324
DNA (624bp) protein (208aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.170 {ECO:0000256|HAMAP-Rule:MF_00074};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=1169349 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE31.;"
Ribosomal RNA small subunit methyltransferase G n=4 Tax=Escherichia coli RepID=R8X112_ECOLX
gidB; 16S rRNA methyltransferase GidB
L3_128_070G1_scaffold_425_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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17941..18321
DNA (381bp) protein (127aa)
atpI; F0F1 ATP synthase subunit I (EC:3.6.3.14)
ATP synthase I n=5 Tax=Escherichia RepID=R8WVZ2_ECOLX
ATP synthase I {ECO:0000313|EMBL:EQV87971.1}; TaxID=1281168 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KOEGE 71 (186a).;"
L3_128_070G1_scaffold_425_17
Escherichia sp. KTE31, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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18330..19145
DNA (816bp) protein (272aa)
atpB; ATP synthase subunit A (EC:3.6.3.14)
ATP synthase subunit a n=4 Tax=Escherichia coli RepID=R8WWA2_ECOLX
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=1169349 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE31.;"
L3_128_070G1_scaffold_425_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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19293..19763
DNA (471bp) protein (157aa)
ATP synthase subunit b n=1428 Tax=cellular organisms RepID=ATPF_ECO24
atpF; ATP synthase F0, B subunit AtpF
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398, ECO:0000256|RuleBase:RU003849}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=749540 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 146-1.;"
L3_128_070G1_scaffold_425_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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19747..20154
DNA (408bp) protein (136aa)
ATP synthase subunit delta n=2 Tax=Escherichia coli RepID=L3C009_ECOLX
ATP synthase F1 subunit delta
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=796392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 79-10.;"
L3_128_070G1_scaffold_425_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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20283..21506
DNA (1224bp) protein (408aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=869686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 9.0111.;"
ATP synthase subunit alpha n=1 Tax=Escherichia coli P0304816.5 RepID=N4RSW6_ECOLX
atpA; F1 sector of membrane-bound ATP synthase, alpha subunit
L3_128_070G1_scaffold_425_21
unknown

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21557..21619
DNA (63bp) protein (21aa)

This feature has no annotations

Displaying 21 items

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