ggKbase home page

L3_128_245G1_scaffold_218

Search features with annotation key words

Displaying items 1-30 of 62 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_245G1_scaffold_218_1
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

330..1796
DNA (1467bp) protein (489aa)
Chorismate binding enzyme n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BYK9_9FIRM
Chorismate binding enzyme {ECO:0000313|EMBL:EDS76068.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
anthranilate/para-aminobenzoate synthase component I, TrpE
L3_128_245G1_scaffold_218_2
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

1793..2362
DNA (570bp) protein (190aa)
Glutamine amidotransferase, class I n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BYL0_9FIRM
Glutamine amidotransferase, class I {ECO:0000313|EMBL:EDS76069.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
anthranilate/para-aminobenzoate synthase component II, TrpG
L3_128_245G1_scaffold_218_3
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

2366..3397
DNA (1032bp) protein (344aa)
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
anthranilate phosphoribosyltransferase (EC:2.4.2.18)
Anthranilate phosphoribosyltransferase n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BYL1_9FIRM
L3_128_245G1_scaffold_218_4
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

3394..4176
DNA (783bp) protein (261aa)
Indole-3-glycerol phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046689}; Short=IGPS {ECO:0000256|HAMAP-Rule:MF_00134};; EC=4.1.1.48 {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046705};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Indole-3-glycerol phosphate synthase (EC:4.1.1.48)
Indole-3-glycerol phosphate synthase n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BYL2_9FIRM
L3_128_245G1_scaffold_218_5
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

4173..4784
DNA (612bp) protein (204aa)
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123216}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123176};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
phosphoribosylanthranilate isomerase (EC:5.3.1.24)
N-(5'-phosphoribosyl)anthranilate isomerase n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BYL3_9FIRM
L3_128_245G1_scaffold_218_6
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

4777..5967
DNA (1191bp) protein (397aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Tryptophan synthase beta chain n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BYL4_9FIRM
tryptophan synthase subunit beta
L3_128_245G1_scaffold_218_7
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

5960..6727
DNA (768bp) protein (256aa)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Tryptophan synthase alpha chain n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BYL5_9FIRM
tryptophan synthase, alpha subunit
L3_128_245G1_scaffold_218_8
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


comp(6833..8272)
DNA (1440bp) protein (480aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01571}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01571};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01571}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
proS; proline--tRNA ligase (EC:6.1.1.15)
Proline--tRNA ligase n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BYL6_9FIRM
L3_128_245G1_scaffold_218_9
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(8326..11352)
DNA (3027bp) protein (1009aa)
sbcC; exonuclease SbcC (EC:3.1.11.-)
Exonuclease SbcCD, C subunit n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BYL7_9FIRM
Exonuclease SbcCD, C subunit {ECO:0000313|EMBL:EDS76076.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
L3_128_245G1_scaffold_218_10
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11339..12469)
DNA (1131bp) protein (377aa)
Exonuclease SbcCD, D subunit n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BYL8_9FIRM
Exonuclease SbcCD, D subunit {ECO:0000313|EMBL:EDS76077.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
sbcD; exonuclease SbcCD, D subunit
L3_128_245G1_scaffold_218_11
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12473..12883)
DNA (411bp) protein (137aa)
tagatose-bisphosphate aldolase (EC:4.1.2.40)
Acetyltransferase, GNAT family n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BYL9_9FIRM
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EDS76078.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
L3_128_245G1_scaffold_218_12
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12988..13410)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LDX9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS56758.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
DNA-binding domain-containing protein
L3_128_245G1_scaffold_218_13
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13501..13779)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BYP2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS76081.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
hypothetical protein
L3_128_245G1_scaffold_218_14
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

13895..15670
DNA (1776bp) protein (592aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BYP3_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDS76082.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
ATPase components of ABC transporters with duplicated ATPase domains
L3_128_245G1_scaffold_218_15
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15677..16489)
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BYP4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS76083.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
transglutaminase
L3_128_245G1_scaffold_218_16
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(16455..17003)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BYP4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS76083.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
transglutaminase
L3_128_245G1_scaffold_218_17
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(17016..17690)
DNA (675bp) protein (225aa)
Acetyltransferase, GNAT family n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BYP5_9FIRM
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EDS76084.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
GCN5-like N-acetyltransferase
L3_128_245G1_scaffold_218_18
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(17744..18655)
DNA (912bp) protein (304aa)
Cell division protein FtsX n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BYP6_9FIRM
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
ftsX; cell-division protein
L3_128_245G1_scaffold_218_19
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(18655..19338)
DNA (684bp) protein (228aa)
Cell division ATP-binding protein FtsE n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BYP7_9FIRM
Cell division ATP-binding protein FtsE {ECO:0000313|EMBL:EDS76086.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
ftsE; cell division ATP-binding protein FtsE
L3_128_245G1_scaffold_218_20
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

19516..19710
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BYP8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS76087.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
L3_128_245G1_scaffold_218_21
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(19731..20612)
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BYP9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS76088.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
ypjC; membrane protein YpjC
L3_128_245G1_scaffold_218_22
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(20614..21717)
DNA (1104bp) protein (368aa)
Peptide chain release factor 2 n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BYQ0_9FIRM
Peptide chain release factor 2 {ECO:0000256|HAMAP-Rule:MF_00094, ECO:0000256|SAAS:SAAS00020438}; Short=RF-2 {ECO:0000256|HAMAP-Rule:MF_00094};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
prfB; peptide chain release factor 2
L3_128_245G1_scaffold_218_23
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(21717..24350)
DNA (2634bp) protein (878aa)
Protein translocase subunit SecA n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BYQ1_9FIRM
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
secA1; Protein translocase subunit SecA 1
L3_128_245G1_scaffold_218_24
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(24766..24963)
DNA (198bp) protein (66aa)
murA2; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 (EC:2.5.1.7)
Cold-shock DNA-binding domain protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BYQ3_9FIRM
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:EDS76092.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
L3_128_245G1_scaffold_218_25
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

25232..26338
DNA (1107bp) protein (369aa)
ComF operon protein 1 {ECO:0000313|EMBL:EDS76093.1}; EC=3.6.4.12 {ECO:0000313|EMBL:EDS76093.1};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
ComF operon protein 1 n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BYQ4_9FIRM
Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein)
L3_128_245G1_scaffold_218_26
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

26305..26934
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BYQ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS76094.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
L3_128_245G1_scaffold_218_27
unknown

Not on your lists

26952..27080
DNA (129bp) protein (43aa)

This feature has no annotations

L3_128_245G1_scaffold_218_28
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(27095..27550)
DNA (456bp) protein (152aa)
Transcriptional regulator, MarR family n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BYQ6_9FIRM
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EDS76095.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
marR; MarR family transcriptional regulator
L3_128_245G1_scaffold_218_29
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

27665..29221
DNA (1557bp) protein (519aa)
Putative ATP synthase F0, A subunit n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BYQ7_9FIRM
Putative ATP synthase F0, A subunit {ECO:0000313|EMBL:EDS76096.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Group I intron
L3_128_245G1_scaffold_218_30
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(29322..29768)
DNA (447bp) protein (149aa)
S-ribosylhomocysteine lyase {ECO:0000256|SAAS:SAAS00059609}; EC=4.4.1.21 {ECO:0000256|SAAS:SAAS00059628};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
LuxS protein involved in autoinducer AI2 synthesis (EC:4.4.1.21)
S-ribosylhomocysteinase LuxS n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BYQ8_9FIRM
Displaying items 1-30 of 62 in total

View Taxonomy