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L3_128_245G1_scaffold_611

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Displaying items 1-30 of 60 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_245G1_scaffold_611_1
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..215
DNA (213bp) protein (71aa)
Polysaccharide biosynthesis protein n=4 Tax=Clostridiales RepID=A7B2U5_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN48395.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Membrane protein involved in the export of O-antigen and teichoic acid
L3_128_245G1_scaffold_611_2
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

286..642
DNA (357bp) protein (119aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5TTE3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN48396.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_128_245G1_scaffold_611_3
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

696..935
DNA (240bp) protein (80aa)
UPF0291 protein RUMGNA_01875 n=4 Tax=Clostridiales RepID=A7B2U7_RUMGN
UPF0291 protein HMPREF0991_01277 {ECO:0000256|HAMAP-Rule:MF_01103}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_128_245G1_scaffold_611_4
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

913..1482
DNA (570bp) protein (190aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
5,10-methenyltetrahydrofolate synthetase (EC:6.3.3.2)
5-formyltetrahydrofolate cyclo-ligase n=3 Tax=Lachnospiraceae RepID=F7JVS8_9FIRM
L3_128_245G1_scaffold_611_5
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1476..1658
DNA (183bp) protein (61aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=A7B2U9_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:CCZ66526.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L3_128_245G1_scaffold_611_6
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1868..3352
DNA (1485bp) protein (495aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TTG7_9FIRM
tRNA-i(6)A37 thiotransferase enzyme MiaB
L3_128_245G1_scaffold_611_7
unknown

Not on your lists

3590..3880
DNA (291bp) protein (97aa)

This feature has no annotations

L3_128_245G1_scaffold_611_8
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3935..6586
DNA (2652bp) protein (884aa)
DNA mismatch repair protein MutS n=2 Tax=Lachnospiraceae RepID=F7JVT5_9FIRM
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
DNA mismatch repair protein MutS
L3_128_245G1_scaffold_611_9
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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6606..8600
DNA (1995bp) protein (665aa)
DNA mismatch repair protein MutL n=3 Tax=Clostridiales RepID=F7JVT6_9FIRM
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
DNA mismatch repair protein MutL
L3_128_245G1_scaffold_611_10
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8601..9569
DNA (969bp) protein (323aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
tRNA isopentenyltransferase (miaA) (EC:2.5.1.75)
tRNA dimethylallyltransferase n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TLI4_9FIRM
L3_128_245G1_scaffold_611_11
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9566..10867
DNA (1302bp) protein (434aa)
Aluminum resistance protein n=3 Tax=Lachnospiraceae RepID=A7B2V9_RUMGN
Aluminum resistance protein {ECO:0000313|EMBL:EDN77732.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Cystathionine beta-lyase family protein involved in aluminum resistance
L3_128_245G1_scaffold_611_12
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10885..12111
DNA (1227bp) protein (409aa)
Flavoprotein family protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TLL6_9FIRM
Flavoprotein family protein {ECO:0000313|EMBL:CCZ66565.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
conserved hypothetical protein TIGR00275
L3_128_245G1_scaffold_611_13
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12098..13690
DNA (1593bp) protein (531aa)
FAD dependent oxidoreductase n=4 Tax=Clostridiales RepID=A7B2W1_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN48410.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Uncharacterized FAD-dependent dehydrogenases
L3_128_245G1_scaffold_611_14
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13783..14478
DNA (696bp) protein (232aa)
DNA repair protein RadC n=3 Tax=Lachnospiraceae RepID=A7B2W2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20266.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
DNA replication and repair protein RadC
L3_128_245G1_scaffold_611_15
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14444..15526
DNA (1083bp) protein (361aa)
Cell shape determining protein MreB/Mrl family n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TLI9_9FIRM
Cell shape determining protein MreB/Mrl family {ECO:0000313|EMBL:CCZ66568.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Actin-like ATPase involved in cell morphogenesis
L3_128_245G1_scaffold_611_16
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15528..16397
DNA (870bp) protein (290aa)
Cell shape-determining protein MreC n=3 Tax=Lachnospiraceae RepID=A7B2W4_RUMGN
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
rod shape-determining protein MreC
L3_128_245G1_scaffold_611_17
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16416..16949
DNA (534bp) protein (178aa)
Rod shape-determining protein MreD n=4 Tax=Clostridiales RepID=A7B2W5_RUMGN
Rod shape-determining protein MreD {ECO:0000313|EMBL:EGN48414.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
rod shape-determining protein MreD
L3_128_245G1_scaffold_611_18
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16942..19797
DNA (2856bp) protein (952aa)
Penicillin-binding protein, transpeptidase domain protein n=3 Tax=Lachnospiraceae RepID=A7B2W6_RUMGN
Penicillin-binding protein, transpeptidase domain protein {ECO:0000313|EMBL:EDN77739.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
pbpA1; penicillin-binding protein PbpA1
L3_128_245G1_scaffold_611_19
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19814..20452
DNA (639bp) protein (213aa)
Probable septum site-determining protein MinC n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U607_9FIRM
Probable septum site-determining protein MinC {ECO:0000256|HAMAP-Rule:MF_00267}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Septum formation inhibitor
L3_128_245G1_scaffold_611_20
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20490..21281
DNA (792bp) protein (264aa)
Site-determining protein n=3 Tax=Lachnospiraceae RepID=A7B2W8_RUMGN
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
septum site-determining protein MinD
L3_128_245G1_scaffold_611_21
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21293..21502
DNA (210bp) protein (70aa)
Cell division topological specificity factor MinE n=3 Tax=Lachnospiraceae RepID=V8BYQ9_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN48418.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Septum formation topological specificity factor MinE.
L3_128_245G1_scaffold_611_22
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21499..22629
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CC55_001C RepID=V8BYL6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20258.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Bacterial cell division membrane protein
L3_128_245G1_scaffold_611_23
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22645..23040
DNA (396bp) protein (132aa)
Methylglyoxal synthase {ECO:0000256|SAAS:SAAS00089917}; EC=4.2.3.3 {ECO:0000256|SAAS:SAAS00089921};; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
methylglyoxal synthase (EC:4.2.3.3)
Methylglyoxal synthase n=4 Tax=Clostridiales RepID=F7JVV1_9FIRM
L3_128_245G1_scaffold_611_24
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23024..24061
DNA (1038bp) protein (346aa)
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B2X2_RUMGN
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:EDN77745.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
D-alanyl-D-alanine carboxypeptidase
L3_128_245G1_scaffold_611_25
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24125..24334)
DNA (210bp) protein (70aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B2X3_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN77746.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L3_128_245G1_scaffold_611_26
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24463..25842
DNA (1380bp) protein (460aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B2X4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN48424.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_128_245G1_scaffold_611_27
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25864..26556
DNA (693bp) protein (231aa)
Pyridoxal phosphate enzyme, YggS family n=3 Tax=Lachnospiraceae RepID=A7B2X5_RUMGN
YggS family pyridoxal phosphate enzyme {ECO:0000313|EMBL:EGN48425.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
pyridoxal phosphate enzyme, YggS family
L3_128_245G1_scaffold_611_28
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26636..27175
DNA (540bp) protein (180aa)
Cell division protein SepF n=4 Tax=Clostridiales RepID=A7B2X6_RUMGN
Cell division protein SepF {ECO:0000256|HAMAP-Rule:MF_01197}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_128_245G1_scaffold_611_29
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27187..27975
DNA (789bp) protein (263aa)
S4 domain protein n=3 Tax=Lachnospiraceae RepID=A7B2X7_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20251.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Uncharacterized conserved protein, contains S4-like domain
L3_128_245G1_scaffold_611_30
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28001..28525
DNA (525bp) protein (175aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
lipoprotein signal peptidase (EC:3.4.23.36)
Lipoprotein signal peptidase n=2 Tax=Clostridiales RepID=R5UCF6_9FIRM
Displaying items 1-30 of 60 in total

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