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L3_128_361G1_scaffold_1143

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_361G1_scaffold_1143_1
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(106..1338)
DNA (1233bp) protein (411aa)
hydroxypyruvate reductase (EC:1.1.1.81)
Hydroxypyruvate reductase {ECO:0000313|EMBL:ADZ82008.1}; EC=1.1.1.81 {ECO:0000313|EMBL:ADZ82008.1};; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
Hydroxypyruvate reductase n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JIT6_CELLD
L3_128_361G1_scaffold_1143_2
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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1517..2350
DNA (834bp) protein (278aa)
Metallo-beta-lactamase domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIN7_9FIRM
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EFB77396.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L3_128_361G1_scaffold_1143_3
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2343..3497
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LVB7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS62744.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
hypothetical protein
L3_128_361G1_scaffold_1143_4
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3523..4860
DNA (1338bp) protein (446aa)
Gluconate:H+ symporter (GntP) family transporter n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LVC4_9FIRM
Gluconate:H+ symporter (GntP) family transporter {ECO:0000313|EMBL:EOS62745.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
gluconate transporter
L3_128_361G1_scaffold_1143_5
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4935..6053)
DNA (1119bp) protein (373aa)
Carboxynorspermidine decarboxylase n=2 Tax=Clostridiales RepID=A7B8F0_RUMGN
Carboxynorspermidine decarboxylase {ECO:0000313|EMBL:CCZ66624.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
carboxynorspermidine decarboxylase
L3_128_361G1_scaffold_1143_6
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6070..7272)
DNA (1203bp) protein (401aa)
carboxynorspermidine dehydrogenase (EC:1.5.1.7)
Saccharopine dehydrogenase n=3 Tax=Lachnospiraceae RepID=A7B8F1_RUMGN
Saccharopine dehydrogenase {ECO:0000313|EMBL:EGN44442.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_128_361G1_scaffold_1143_7
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7306..8163)
DNA (858bp) protein (286aa)
Agmatinase {ECO:0000313|EMBL:EDN75782.1}; EC=3.5.3.11 {ECO:0000313|EMBL:EDN75782.1};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
speB; agmatinase SpeB (EC:3.5.3.11)
Agmatinase n=4 Tax=Clostridiales RepID=A7B8F2_RUMGN
L3_128_361G1_scaffold_1143_8
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8153..9004)
DNA (852bp) protein (284aa)
spermidine synthase (EC:2.5.1.16)
Spermidine synthase n=4 Tax=Clostridiales RepID=A7B8F3_RUMGN
Polyamine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Putrescine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Spermidine synthase {ECO:0000256|HAMAP-Rule:MF_00198}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_128_361G1_scaffold_1143_9
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9019..9966)
DNA (948bp) protein (316aa)
Orn/Lys/Arg decarboxylase, major domain protein n=4 Tax=Clostridiales RepID=A7B8F4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:CCZ66628.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Orn/Lys/Arg decarboxylase major region
L3_128_361G1_scaffold_1143_10
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9963..10406)
DNA (444bp) protein (148aa)
arginine decarboxylase (EC:4.1.1.19 4.1.1.18)
Orn/Lys/Arg decarboxylase, major domain protein n=4 Tax=Clostridiales RepID=A7B8F4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD15686.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L3_128_361G1_scaffold_1143_11
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10934..11314
DNA (381bp) protein (127aa)
Oxidoreductase n=1 Tax=Clostridium sp. D5 RepID=F0YTU4_9CLOT
Oxidoreductase {ECO:0000313|EMBL:EGB94314.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
aldo/keto reductase
L3_128_361G1_scaffold_1143_12
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11262..11798
DNA (537bp) protein (179aa)
Oxidoreductase n=1 Tax=Clostridium sp. D5 RepID=F0YTU4_9CLOT
Oxidoreductase {ECO:0000313|EMBL:EGB94314.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
aldo/keto reductase
L3_128_361G1_scaffold_1143_13
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12085..12426)
DNA (342bp) protein (114aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B8F5_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN44446.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_128_361G1_scaffold_1143_14
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12503..13012)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TLR4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ66630.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L3_128_361G1_scaffold_1143_15
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13426..14799)
DNA (1374bp) protein (458aa)
Pyridine nucleotide-disulfide oxidoreductase n=4 Tax=Clostridiales RepID=A7B8G1_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD15680.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Uncharacterized FAD-dependent dehydrogenases
L3_128_361G1_scaffold_1143_16
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14887..16545)
DNA (1659bp) protein (553aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TLR9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ66635.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
ATP-binding cassette subfamily C protein
L3_128_361G1_scaffold_1143_17
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16542..18131)
DNA (1590bp) protein (530aa)
ABC transporter, ATP-binding protein n=4 Tax=Clostridiales RepID=A7B8G3_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN44453.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components
L3_128_361G1_scaffold_1143_18
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18124..18501)
DNA (378bp) protein (126aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B8G4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN44454.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Nitrous oxide-stimulated promoter.
L3_128_361G1_scaffold_1143_19
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18502..18888)
DNA (387bp) protein (129aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B8G5_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:CCZ66638.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L3_128_361G1_scaffold_1143_20
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19096..20016
DNA (921bp) protein (307aa)
CAAX amino terminal protease family protein n=4 Tax=Clostridiales RepID=A7B8G6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN44456.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_128_361G1_scaffold_1143_21
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20003..22324)
DNA (2322bp) protein (774aa)
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:EDN75797.1}; EC=3.6.1.- {ECO:0000313|EMBL:EDN75797.1};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
ATP-dependent DNA helicase, RecQ-like (EC:3.6.1.-)
ATP-dependent DNA helicase RecQ n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B8G7_RUMGN
L3_128_361G1_scaffold_1143_22
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22284..22952)
DNA (669bp) protein (223aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5U657_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN44458.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Uncharacterised protein family (UPF0153).
L3_128_361G1_scaffold_1143_23
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23133..25262
DNA (2130bp) protein (710aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B8H0_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN75800.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
L3_128_361G1_scaffold_1143_24
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25320..25694
DNA (375bp) protein (125aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B8H1_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD15671.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
hypothetical protein
L3_128_361G1_scaffold_1143_25
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25781..26692
DNA (912bp) protein (304aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BLI4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD15670.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
helix-turn-helix domain-containing protein
L3_128_361G1_scaffold_1143_26
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

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26905..27300
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A2 RepID=R9KLX1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS47216.1}; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
hypothetical protein
L3_128_361G1_scaffold_1143_27
Roseburia sp. CAG:471, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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27300..27668
DNA (369bp) protein (123aa)
Transposase n=1 Tax=Roseburia sp. CAG:471 RepID=R7E8N2_9FIRM
Transposase {ECO:0000313|EMBL:CDD98653.1}; TaxID=1262948 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:471.;"
transposase
L3_128_361G1_scaffold_1143_28
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(27686..28642)
DNA (957bp) protein (319aa)
Sugar kinases, ribokinase family (EC:2.7.1.4)
Sugar kinases ribokinase family n=1 Tax=Roseburia sp. CAG:45 RepID=R6NW82_9FIRM
Sugar kinases ribokinase family {ECO:0000313|EMBL:CDC12669.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
L3_128_361G1_scaffold_1143_29
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28600..29325)
DNA (726bp) protein (242aa)
beta-fructofuranosidase (EC:3.2.1.26)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6PSB8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC12667.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
L3_128_361G1_scaffold_1143_30
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29564..31021)
DNA (1458bp) protein (486aa)
sucrose-6-phosphate hydrolase (EC:3.2.1.26)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MB29_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS68249.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
Displaying items 1-30 of 40 in total

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