ggKbase home page

L3_128_361G1_scaffold_1899

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_361G1_scaffold_1899_1
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2..88)
DNA (87bp) protein (29aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 3_2_5 RepID=C6I903_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY57191.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
L3_128_361G1_scaffold_1899_2
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(164..568)
DNA (405bp) protein (135aa)
Uncharacterized protein n=18 Tax=Bacteroides RepID=E1WUR7_BACF6
Protein of unknown function (DUF3408).
Uncharacterized protein {ECO:0000313|EMBL:EFV26611.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
L3_128_361G1_scaffold_1899_3
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(598..1014)
DNA (417bp) protein (139aa)
Uncharacterized protein n=18 Tax=Bacteroides RepID=E1WUR6_BACF6
Protein of unknown function (DUF3408).
Uncharacterized protein {ECO:0000313|EMBL:KER56934.1}; TaxID=817 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis.;"
L3_128_361G1_scaffold_1899_4
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1728..2000
DNA (273bp) protein (91aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=G1UL27_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGX26060.1}; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
L3_128_361G1_scaffold_1899_5
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1929..2495)
DNA (567bp) protein (189aa)
Predicted metal-binding protein n=29 Tax=root RepID=D4IMZ6_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EYE42002.1}; TaxID=1339329 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S23L17.;"
L3_128_361G1_scaffold_1899_6
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2492..3250)
DNA (759bp) protein (253aa)
Iron-chelate-transporting ATPase (EC:3.6.3.34)
Iron(III) ABC transporter ATP-binding protein n=28 Tax=root RepID=Q64RV9_BACFR
Uncharacterized protein {ECO:0000313|EMBL:EKA79871.1}; TaxID=1073388 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 616.;"
L3_128_361G1_scaffold_1899_7
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3247..4227)
DNA (981bp) protein (327aa)
ABC-type Fe3+-siderophore transport system, permease component n=22 Tax=root RepID=D4IMZ8_9BACT
putative iron transport-related family system permease protein
Uncharacterized protein {ECO:0000313|EMBL:EKA79872.1}; TaxID=1073388 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 616.;"
L3_128_361G1_scaffold_1899_8
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4228..5367)
DNA (1140bp) protein (380aa)
ABC-type Fe3+-hydroxamate transport system, periplasmic component n=25 Tax=root RepID=D4IMZ9_9BACT
Fe3+-hydroxamate ABC transporter periplasmic protein
Uncharacterized protein {ECO:0000313|EMBL:EKA79873.1}; TaxID=1073388 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 616.;"
L3_128_361G1_scaffold_1899_9
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5379..7436)
DNA (2058bp) protein (686aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=C6I913_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY20110.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
TonB-dependent receptor
L3_128_361G1_scaffold_1899_10
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7476..8576)
DNA (1101bp) protein (367aa)
Uncharacterized protein n=30 Tax=root RepID=E1WUQ9_BACF6
surface layer protein
Putative surface layer protein {ECO:0000313|EMBL:EFI36988.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
L3_128_361G1_scaffold_1899_11
Bacteroides sp. 2_1_16, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8861..10639)
DNA (1779bp) protein (593aa)
Putative uncharacterized protein n=2 Tax=Bacteroides eggerthii RepID=B7AEW3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEZ28096.1}; TaxID=469587 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_16.;"
hypothetical protein
L3_128_361G1_scaffold_1899_12
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10654..12435)
DNA (1782bp) protein (594aa)
Uncharacterized protein n=28 Tax=Bacteroidales RepID=E1WUQ7_BACF6
cell surface protein
Cell surface protein {ECO:0000313|EMBL:KER56942.1}; TaxID=817 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis.;"
L3_128_361G1_scaffold_1899_13
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12500..13417)
DNA (918bp) protein (306aa)
Uncharacterized protein n=21 Tax=root RepID=E1WUQ6_BACF6
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EFI36985.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
L3_128_361G1_scaffold_1899_14
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14527..15420)
DNA (894bp) protein (298aa)
Uncharacterized protein n=21 Tax=Bacteroidales RepID=I3YNZ7_ALIFI
hypothetical protein
Putative lipoprotein {ECO:0000313|EMBL:EFF51020.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
L3_128_361G1_scaffold_1899_15
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15850..16791)
DNA (942bp) protein (314aa)
Tyrosine type site-specific recombinase n=1 Tax=Bacteroides sp. 4_1_36 RepID=E5V9M4_9BACE
Tyrosine type site-specific recombinase {ECO:0000313|EMBL:EFV26467.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
integrase
L3_128_361G1_scaffold_1899_16
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17811..18599
DNA (789bp) protein (263aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 4_1_36 RepID=E5V9M6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFV26469.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
hypothetical protein
L3_128_361G1_scaffold_1899_17
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18613..19530
DNA (918bp) protein (306aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=A7V396_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EFV26470.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
hypothetical protein
L3_128_361G1_scaffold_1899_18
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19573..20328
DNA (756bp) protein (252aa)
Major outer membrane protein OmpA n=1 Tax=Bacteroides sp. 4_1_36 RepID=E5V9M8_9BACE
Major outer membrane protein OmpA {ECO:0000313|EMBL:EFV26471.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
membrane protein
Displaying 18 items

View Taxonomy