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L3_128_361G1_scaffold_13

Search features with annotation key words

Displaying items 1-30 of 170 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_361G1_scaffold_13_1
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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3..191
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RMX3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ34242.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
hypothetical protein
L3_128_361G1_scaffold_13_2
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

411..2498
DNA (2088bp) protein (696aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R1Q8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35120.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
L3_128_361G1_scaffold_13_3
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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2519..3052
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RQJ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35122.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
L3_128_361G1_scaffold_13_4
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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3065..3775
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R364_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35123.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
hypothetical protein
L3_128_361G1_scaffold_13_5
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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4102..5640
DNA (1539bp) protein (513aa)
ABC transporter ATP-binding protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R8P0_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CCZ35124.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
yheS; ABC transporter ATP-binding protein
L3_128_361G1_scaffold_13_6
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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5776..7131
DNA (1356bp) protein (452aa)
Transporter n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R1R3_9FIRM
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
Na+-dependent transporter
L3_128_361G1_scaffold_13_7
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(7318..8667)
DNA (1350bp) protein (450aa)
MATE efflux family protein DinF n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RK10_9FIRM
MATE efflux family protein DinF {ECO:0000313|EMBL:CCZ35126.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
MATE efflux family protein
L3_128_361G1_scaffold_13_8
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8901..9086)
DNA (186bp) protein (62aa)
RelE/StbE family addiction module toxin n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IPV4_9FIRM
RelE/StbE family addiction module toxin {ECO:0000313|EMBL:EOS23821.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
RelE/StbE family addiction module toxin
L3_128_361G1_scaffold_13_9
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9080..9298)
DNA (219bp) protein (73aa)
Uncharacterized protein n=6 Tax=Clostridium clostridioforme RepID=N9VIW1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ69367.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L3_128_361G1_scaffold_13_10
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

9466..10332
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R369_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35128.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
AraC-type DNA-binding domain-containing proteins
L3_128_361G1_scaffold_13_11

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10697..11866
DNA (1170bp) protein (390aa)
Uncharacterized conserved protein UCP033101 n=1 Tax=gut metagenome RepID=J9GMX0_9ZZZZ
Uncharacterized conserved protein UCP033101 {ECO:0000313|EMBL:EJX01205.1}; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
hypothetical protein
L3_128_361G1_scaffold_13_12
unknown

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11871..12665
DNA (795bp) protein (265aa)

This feature has no annotations

L3_128_361G1_scaffold_13_13
unknown

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12734..12850
DNA (117bp) protein (39aa)

This feature has no annotations

L3_128_361G1_scaffold_13_14
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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12876..14981
DNA (2106bp) protein (702aa)
Sigma-70 region 2 n=1 Tax=Dorea sp. CAG:105 RepID=R5DB97_9FIRM
Sigma-70 region 2 {ECO:0000313|EMBL:CCX74082.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
RNA polymerase sigma factor, sigma-70 family
L3_128_361G1_scaffold_13_15
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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15038..16912
DNA (1875bp) protein (625aa)
OmpA family protein n=1 Tax=Blautia sp. CAG:257 RepID=R5WWU5_9FIRM
OmpA family protein {ECO:0000313|EMBL:CDA07015.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
OmpA/MotB domain-containing protein
L3_128_361G1_scaffold_13_16
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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17484..17690
DNA (207bp) protein (69aa)
Preprotein translocase SecE subunit n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R8P4_9FIRM
Preprotein translocase SecE subunit {ECO:0000313|EMBL:CCZ35129.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
protein translocase subunit secE/sec61 gamma
L3_128_361G1_scaffold_13_17
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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17707..18222
DNA (516bp) protein (172aa)
Transcription termination/antitermination protein NusG n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R1R8_9FIRM
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
transcription antitermination protein nusG
L3_128_361G1_scaffold_13_18
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists


18291..18716
DNA (426bp) protein (142aa)
50S ribosomal protein L11 n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RK12_9FIRM
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
LSU ribosomal protein L11P
L3_128_361G1_scaffold_13_19
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists


18798..19490
DNA (693bp) protein (231aa)
50S ribosomal protein L1 n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R374_9FIRM
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
ribosomal protein L1, bacterial/chloroplast
L3_128_361G1_scaffold_13_20
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists


19735..20223
DNA (489bp) protein (163aa)
50S ribosomal protein L10 n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R8P8_9FIRM
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
LSU ribosomal protein L10P
L3_128_361G1_scaffold_13_21
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists


20446..20820
DNA (375bp) protein (125aa)
50S ribosomal protein L7/L12 n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R1S3_9FIRM
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
LSU ribosomal protein L12P
L3_128_361G1_scaffold_13_22
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(20921..21343)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RK16_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35136.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
L3_128_361G1_scaffold_13_23
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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comp(21442..22476)
DNA (1035bp) protein (345aa)
Putative ribose operon repressor n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RQK7_9FIRM
Putative ribose operon repressor {ECO:0000313|EMBL:CCZ35137.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
transcriptional regulator, LacI family
L3_128_361G1_scaffold_13_24
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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22824..24197
DNA (1374bp) protein (458aa)
Putative bacterial extracellular solute-binding protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R381_9FIRM
Putative bacterial extracellular solute-binding protein {ECO:0000313|EMBL:CCZ35138.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L3_128_361G1_scaffold_13_25
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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24231..25103
DNA (873bp) protein (291aa)
Putative ABC-type sugar transport system permease component n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R1S9_9FIRM
Putative ABC-type sugar transport system permease component {ECO:0000313|EMBL:CCZ35140.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
permease component of ABC-type sugar transporter
L3_128_361G1_scaffold_13_26
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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25103..25963
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RK21_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35141.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L3_128_361G1_scaffold_13_27
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

26005..27333
DNA (1329bp) protein (443aa)
beta-fructofuranosidase (EC:3.2.1.26)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RQL2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35142.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
L3_128_361G1_scaffold_13_28
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

27463..31386
DNA (3924bp) protein (1308aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R387_9FIRM
L3_128_361G1_scaffold_13_29
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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31440..35168
DNA (3729bp) protein (1243aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R8Q8_9FIRM
L3_128_361G1_scaffold_13_30
Roseburia sp. CAG:471, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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35724..36137
DNA (414bp) protein (138aa)
30S ribosomal protein S12 n=2 Tax=Firmicutes RepID=R5R1T3_9FIRM
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=1262948 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:471.;"
SSU ribosomal protein S12P
Displaying items 1-30 of 170 in total

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