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L3_128_361G1_scaffold_33

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Displaying items 1-30 of 138 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_361G1_scaffold_33_1
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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74..1114
DNA (1041bp) protein (347aa)
adenine-specific DNA-methyltransferase (EC:2.1.1.72)
DNA (Cytosine-5-)-methyltransferase n=1 Tax=Phascolarctobacterium succinatutens YIT 12067 RepID=E8LE78_9FIRM
DNA (Cytosine-5-)-methyltransferase {ECO:0000313|EMBL:EFY04842.1}; TaxID=626939 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens YIT 12067.;"
L3_128_361G1_scaffold_33_2
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1117..3744
DNA (2628bp) protein (876aa)
hypothetical protein n=1 Tax=Coriobacteriaceae RepID=UPI000346E9DB
Bifidobacterium kashiwanohense JCM 15439 = DSM 21854 DNA, complete genome {ECO:0000313|EMBL:BAQ29387.1}; Type III restriction enzyme, res subunit family {ECO:0000313|EMBL:KFI66487.1}; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
type III restriction protein res subunit
L3_128_361G1_scaffold_33_3
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3783..5561
DNA (1779bp) protein (593aa)
hypothetical protein n=1 Tax=Prevotella maculosa RepID=UPI00035CACF4
Uncharacterized protein {ECO:0000313|EMBL:EFR57059.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
hypothetical protein
L3_128_361G1_scaffold_33_4
Atopobium parvulum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(5833..5928)
DNA (96bp) protein (32aa)
Addiction module toxin, RelE/StbE family n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W967_ATOPD
RelE/StbE family addiction module toxin
Addiction module toxin, RelE/StbE family {ECO:0000313|EMBL:ACV50655.1}; TaxID=521095 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI; 0546) (Streptococcus parvulus) (Peptostreptococcus parvulus).;"
L3_128_361G1_scaffold_33_5
Atopobium sp. oral taxon 199, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(5932..6216)
DNA (285bp) protein (95aa)
DNA-damage-inducible protein J n=1 Tax=Atopobium sp. oral taxon 199 str. F0494 RepID=S3AM84_9ACTN
DNA-damage-inducible protein J {ECO:0000313|EMBL:EPD77449.1}; TaxID=1203602 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. oral taxon 199 str. F0494.;"
RelB/DinJ family addiction module antitoxin
L3_128_361G1_scaffold_33_6
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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6657..7169
DNA (513bp) protein (171aa)
YaiI/YqxD family protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GE40_9ACTN
UPF0178 protein COLSTE_02377 {ECO:0000256|HAMAP-Rule:MF_00489}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
hypothetical protein
L3_128_361G1_scaffold_33_7
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(7261..8361)
DNA (1101bp) protein (367aa)
Uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GE41_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEA89459.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
Protein of unknown function (DUF2899).
L3_128_361G1_scaffold_33_8
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

8808..9773
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F9L4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEP44392.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
DNA polymerase III epsilon subunit-like 3'-5' exonuclease
L3_128_361G1_scaffold_33_9
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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10189..11421
DNA (1233bp) protein (411aa)
Polysaccharide deacetylase n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F9L6_9ACTN
Polysaccharide deacetylase {ECO:0000313|EMBL:EEP44394.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
polysaccharide deacetylase
L3_128_361G1_scaffold_33_10
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(11512..12195)
DNA (684bp) protein (228aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F9L7_9ACTN
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:EEP44395.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
ntcA2; global nitrogen regulator NtcA
L3_128_361G1_scaffold_33_11
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

12342..13616
DNA (1275bp) protein (425aa)
Uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F9L8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEP44396.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
larA; lactate racemization operon protein LarA
L3_128_361G1_scaffold_33_12
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

13716..14447
DNA (732bp) protein (244aa)
Transporter, major intrinsic protein (MIP) family protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F9L9_9ACTN
Transporter, major intrinsic protein (MIP) family protein {ECO:0000313|EMBL:EEP44397.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
major intrinsic family protein
L3_128_361G1_scaffold_33_13
unknown

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14571..14705
DNA (135bp) protein (45aa)

This feature has no annotations

L3_128_361G1_scaffold_33_14
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

15035..16201
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F9M1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEP44399.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
hypothetical protein
L3_128_361G1_scaffold_33_15
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

16514..16873
DNA (360bp) protein (120aa)
Transcriptional regulator, ArsR family n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F9M3_9ACTN
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:EEP44401.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
ArsR family transcriptional regulator
L3_128_361G1_scaffold_33_16
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

16977..17195
DNA (219bp) protein (73aa)
Heavy metal-associated domain protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F9M4_9ACTN
Heavy metal-associated domain protein {ECO:0000313|EMBL:EEP44402.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
heavy metal transport/detoxification protein
L3_128_361G1_scaffold_33_17
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

17323..19251
DNA (1929bp) protein (643aa)
Cadmium-exporting ATPase {ECO:0000313|EMBL:EEP44403.1}; EC=3.6.3.3 {ECO:0000313|EMBL:EEP44403.1};; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
Cadmium-exporting ATPase n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F9M5_9ACTN
heavy metal translocating P-type ATPase
L3_128_361G1_scaffold_33_18
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

19410..20693
DNA (1284bp) protein (428aa)
Transporter, major facilitator family protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F9M7_9ACTN
Transporter, major facilitator family protein {ECO:0000313|EMBL:EEP44405.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
major facilitator superfamily protein
L3_128_361G1_scaffold_33_19
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(20845..22107)
DNA (1263bp) protein (421aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
Serine hydroxymethyltransferase n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F9M8_9ACTN
serine hydroxymethyltransferase
L3_128_361G1_scaffold_33_20
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(22366..22794)
DNA (429bp) protein (143aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F9M9_9ACTN
FKBP-type peptidylprolyl isomerase
L3_128_361G1_scaffold_33_21
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(22917..24191)
DNA (1275bp) protein (425aa)
Putative permease n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F9N0_9ACTN
Putative permease {ECO:0000313|EMBL:EEP44408.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
pyrP; NCS2 family nucleobase:cation symporter-2
L3_128_361G1_scaffold_33_22
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

24341..25105
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F9N1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEP44409.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
zinc metalloprotease
L3_128_361G1_scaffold_33_23
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

25473..26336
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F9N3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEP44411.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
hypothetical protein
L3_128_361G1_scaffold_33_24
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(26695..26832)
DNA (138bp) protein (46aa)
Rubredoxin n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F9N4_9ACTN
Rubredoxin {ECO:0000313|EMBL:EEP44412.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
rubredoxin-type Fe(Cys)4 protein
L3_128_361G1_scaffold_33_25
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(26969..27481)
DNA (513bp) protein (171aa)
Putative high molecular weight rubredoxin n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F9N5_9ACTN
Putative high molecular weight rubredoxin {ECO:0000313|EMBL:EEP44413.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
flavin reductase domain-containing FMN-binding protein
L3_128_361G1_scaffold_33_26
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(27576..28064)
DNA (489bp) protein (163aa)
SsrA-binding protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F9N6_9ACTN
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
SsrA-binding protein
L3_128_361G1_scaffold_33_27
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(28067..29041)
DNA (975bp) protein (325aa)
Tetratricopeptide repeat protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F9N7_9ACTN
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EEP44415.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
hypothetical protein
L3_128_361G1_scaffold_33_28
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(29126..31228)
DNA (2103bp) protein (701aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
Ribonuclease R n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F9N8_9ACTN
L3_128_361G1_scaffold_33_29
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(31534..32481)
DNA (948bp) protein (316aa)
Cell division protein FtsX n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F9P0_9ACTN
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EEP44418.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
cell division protein FtsX
L3_128_361G1_scaffold_33_30
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(32468..33682)
DNA (1215bp) protein (405aa)
Cell division ATP-binding protein FtsE n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F9P1_9ACTN
Cell division ATP-binding protein FtsE {ECO:0000313|EMBL:EEP44419.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
cell division ATP-binding protein FtsE
Displaying items 1-30 of 138 in total

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