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L3_128_361G1_scaffold_44

Search features with annotation key words

Displaying items 1-30 of 159 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_361G1_scaffold_44_1
Plasmodium cynomolgi, Plasmodium, Haemosporida, Aconoidasida, Apicomplexa, Eukaryota

Not on your lists

comp(3..140)
DNA (138bp) protein (46aa)
Uncharacterized protein n=1 Tax=Plasmodium cynomolgi strain B RepID=K6VGJ1_9APIC
Uncharacterized protein {ECO:0000313|EMBL:GAB68462.1}; TaxID=1120755 species="Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Plasmodium).;" source="Plasmodium cynomolgi strain B.;"
hypothetical protein
L3_128_361G1_scaffold_44_2
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(297..1910)
DNA (1614bp) protein (538aa)
Peptide chain release factor 3 n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FCE3_9ACTN
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
bacterial peptide chain release factor 3 (bRF-3)
L3_128_361G1_scaffold_44_3
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(2129..2413)
DNA (285bp) protein (95aa)
Ribbon-helix-helix protein, CopG family n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FCE4_9ACTN
Ribbon-helix-helix protein, CopG family {ECO:0000313|EMBL:EEP43510.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
hypothetical protein
L3_128_361G1_scaffold_44_4
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(2413..2682)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FCE5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEP43511.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
L3_128_361G1_scaffold_44_5
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(3156..4823)
DNA (1668bp) protein (556aa)
Sulfate permease n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FCE6_9ACTN
Sulfate permease {ECO:0000313|EMBL:EEP43512.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
Sulfate permease and related transporters (MFS superfamily)
L3_128_361G1_scaffold_44_6
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(4966..5658)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FCE8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEP43514.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
ubiquinone/menaquinone biosynthesis methylase
L3_128_361G1_scaffold_44_7
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

5907..6593
DNA (687bp) protein (229aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazolesuccinocarboxamide synthase n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FCE9_9ACTN
L3_128_361G1_scaffold_44_8
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(6850..10161)
DNA (3312bp) protein (1104aa)
abfA; alpha-N-arabinofuranosidase (EC:3.2.1.55)
LPXTG-motif cell wall anchor domain protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FCF0_9ACTN
LPXTG-motif cell wall anchor domain protein {ECO:0000313|EMBL:EEP43516.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
L3_128_361G1_scaffold_44_9
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(10568..12205)
DNA (1638bp) protein (546aa)
60 kDa chaperonin n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FCF2_9ACTN
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
chaperonin GroEL
L3_128_361G1_scaffold_44_10
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(12387..12674)
DNA (288bp) protein (96aa)
10 kDa chaperonin n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FCF3_9ACTN
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
chaperonin Cpn10
L3_128_361G1_scaffold_44_11
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(12919..14568)
DNA (1650bp) protein (550aa)
Amidohydrolase family protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FCF4_9ACTN
Amidohydrolase family protein {ECO:0000313|EMBL:EEP43520.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
amidohydrolase
L3_128_361G1_scaffold_44_12
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(15173..15988)
DNA (816bp) protein (272aa)
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
Purine-nucleoside phosphorylase (EC:2.4.2.1)
Purine nucleoside phosphorylase n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FCF5_9ACTN
L3_128_361G1_scaffold_44_13
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(16411..17616)
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FCF7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEP43523.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
hypothetical protein
L3_128_361G1_scaffold_44_14
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(17846..18931)
DNA (1086bp) protein (362aa)
Putative isocitrate dehydrogenase, NAD-dependent n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FCF8_9ACTN
Putative isocitrate dehydrogenase, NAD-dependent {ECO:0000313|EMBL:EEP43524.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
isocitrate dehydrogenase
L3_128_361G1_scaffold_44_15
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(18935..19630)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FCF9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEP43525.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
hypothetical protein
L3_128_361G1_scaffold_44_16
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(19813..20253)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FCG0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEP43526.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
hypothetical protein
L3_128_361G1_scaffold_44_17
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(20260..21360)
DNA (1101bp) protein (367aa)
3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31)
Phosphogluconate dehydrogenase (Decarboxylating), NAD binding domain protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FCG1_9ACTN
Phosphogluconate dehydrogenase (Decarboxylating), NAD binding domain protein {ECO:0000313|EMBL:EEP43527.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
L3_128_361G1_scaffold_44_18
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(21450..22406)
DNA (957bp) protein (319aa)
EDD domain protein, DegV family n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FCG2_9ACTN
EDD domain protein, DegV family {ECO:0000313|EMBL:EEP43528.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
degV family protein
L3_128_361G1_scaffold_44_19
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(22481..23065)
DNA (585bp) protein (195aa)
Ribosomal subunit interface protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FCG3_9ACTN
Ribosomal subunit interface protein {ECO:0000313|EMBL:EEP43529.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
30S ribosomal protein S30P; sigma 54 modulation protein
L3_128_361G1_scaffold_44_20
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(23230..24189)
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FCG4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEP43530.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
family 3 extracellular solute-binding protein
L3_128_361G1_scaffold_44_21
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(24679..25290)
DNA (612bp) protein (204aa)
ComF family protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6G8F9_9ACTN
ComF family protein {ECO:0000313|EMBL:EEA91423.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
hypothetical protein
L3_128_361G1_scaffold_44_22
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(25516..27129)
DNA (1614bp) protein (538aa)
PSP1 C-terminal domain protein (Fragment) n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBK7_9ACTN
PSP1 C-terminal domain protein {ECO:0000313|EMBL:EEP43759.1}; Flags: Fragment;; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
PSP1 domain-containing protein
L3_128_361G1_scaffold_44_23
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(27120..28265)
DNA (1146bp) protein (382aa)
DNA polymerase III, delta prime subunit (EC:2.7.7.7)
Putative DNA polymerase III, delta' subunit n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBK8_9ACTN
Putative DNA polymerase III, delta' subunit {ECO:0000313|EMBL:EEP43760.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
L3_128_361G1_scaffold_44_24
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(28268..28948)
DNA (681bp) protein (227aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
thymidylate kinase (EC:2.7.4.9)
Thymidylate kinase n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBK9_9ACTN
L3_128_361G1_scaffold_44_25
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(28952..31552)
DNA (2601bp) protein (867aa)
DNA topoisomerase {ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|SAAS:SAAS00046608};; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBL0_9ACTN
L3_128_361G1_scaffold_44_26
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(32040..32834)
DNA (795bp) protein (265aa)
Sec-independent protein translocase protein TatC n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBL1_9ACTN
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
Sec-independent protein translocase subunit TatC
L3_128_361G1_scaffold_44_27
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(32834..33406)
DNA (573bp) protein (191aa)
Twin arginine-targeting protein translocase, TatA/E family n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBL2_9ACTN
Twin arginine-targeting protein translocase, TatA/E family {ECO:0000313|EMBL:EEP43764.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
sec-independent translocation protein mttA/Hcf106
L3_128_361G1_scaffold_44_28
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(33531..33845)
DNA (315bp) protein (105aa)
Anti-sigma factor antagonist n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBL3_9ACTN
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
anti-anti-sigma factor
L3_128_361G1_scaffold_44_29
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(33885..34682)
DNA (798bp) protein (266aa)
Tetratricopeptide repeat protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBL4_9ACTN
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EEP43766.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
hypothetical protein
L3_128_361G1_scaffold_44_30
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(34683..35987)
DNA (1305bp) protein (435aa)
Aminotransferase, class I/II {ECO:0000313|EMBL:EEP43767.1}; EC=2.6.1.- {ECO:0000313|EMBL:EEP43767.1};; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
Aminotransferase, class I/II n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBL5_9ACTN
transcriptional regulator
Displaying items 1-30 of 159 in total

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