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L3_128_361G1_scaffold_63

Search features with annotation key words

Displaying items 1-30 of 107 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_361G1_scaffold_63_1
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(444..890)
DNA (447bp) protein (149aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112508};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
Lipoprotein signal peptidase n=2 Tax=Firmicutes RepID=R6Q2I1_9FIRM
lipoprotein signal peptidase
L3_128_361G1_scaffold_63_2
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(887..1213)
DNA (327bp) protein (109aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=R6PZV4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD61333.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
L3_128_361G1_scaffold_63_3
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

comp(1327..2685)
DNA (1359bp) protein (453aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6Q2I8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC29980.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
hypothetical protein
L3_128_361G1_scaffold_63_4
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2870..3757)
DNA (888bp) protein (296aa)
Beta-lactamase domain protein n=1 Tax=Clostridium sp. CAG:505 RepID=R7B8R4_9CLOT
Beta-lactamase domain protein {ECO:0000313|EMBL:CDD61331.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
beta-lactamase domain-containing protein
L3_128_361G1_scaffold_63_5
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3925..4872)
DNA (948bp) protein (316aa)
fructose-bisphosphate aldolase (EC:4.1.2.13)
Fructose-bisphosphate aldolase n=1 Tax=Clostridium sp. CAG:505 RepID=R7AS64_9CLOT
Fructose-bisphosphate aldolase {ECO:0000313|EMBL:CDD61330.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
L3_128_361G1_scaffold_63_6
unknown

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comp(4875..5036)
DNA (162bp) protein (54aa)

This feature has no annotations

L3_128_361G1_scaffold_63_7
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5063..5476)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:505 RepID=R7B7Z1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD61329.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
hypothetical protein
L3_128_361G1_scaffold_63_8
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(5598..6845)
DNA (1248bp) protein (416aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase n=2 Tax=Firmicutes RepID=R6R6G1_9FIRM
L3_128_361G1_scaffold_63_9
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6842..8293)
DNA (1452bp) protein (484aa)
coproporphyrinogen dehydrogenase (EC:1.3.99.22)
Coproporphyrinogen dehydrogenase n=1 Tax=Clostridium sp. CAG:505 RepID=R7B7P1_9CLOT
Coproporphyrinogen dehydrogenase {ECO:0000313|EMBL:CDD61327.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
L3_128_361G1_scaffold_63_10
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8309..8761)
DNA (453bp) protein (151aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160054}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160046};; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
dtd; D-tyrosyl-tRNA(Tyr) deacylase (EC:3.1.-.-)
D-tyrosyl-tRNA(Tyr) deacylase n=2 Tax=Firmicutes RepID=R6R6G3_9FIRM
L3_128_361G1_scaffold_63_11
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

comp(8779..11031)
DNA (2253bp) protein (751aa)
(p)ppGpp synthetase I SpoT/RelA (EC:2.7.6.5)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6QAC6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC29994.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
L3_128_361G1_scaffold_63_12
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

comp(11121..12281)
DNA (1161bp) protein (387aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
Glycoside hydrolase family 3 domain protein n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6QGM4_9FIRM
glycoside hydrolase family protein
L3_128_361G1_scaffold_63_13
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

12421..13143
DNA (723bp) protein (241aa)
PP-loop domain protein n=2 Tax=Firmicutes RepID=R6R6H9_9FIRM
PP-loop domain protein {ECO:0000313|EMBL:CDC30002.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
PP-loop domain-containing protein
L3_128_361G1_scaffold_63_14
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13145..14206
DNA (1062bp) protein (354aa)
Site-specific recombinase phage integrase family n=1 Tax=Clostridium sp. CAG:505 RepID=R7B8R1_9CLOT
Site-specific recombinase phage integrase family {ECO:0000313|EMBL:CDD61322.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
hypothetical protein
L3_128_361G1_scaffold_63_15
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

14212..14853
DNA (642bp) protein (214aa)
NUDIX family hydrolase (EC:3.-.-.-)
Hydrolase NUDIX family n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6QGN6_9FIRM
Hydrolase NUDIX family {ECO:0000313|EMBL:CDC30006.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
L3_128_361G1_scaffold_63_16
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

14972..15640
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6Q015_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC30008.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
hypothetical protein
L3_128_361G1_scaffold_63_17
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

15655..16566
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6QGP6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC30011.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
L3_128_361G1_scaffold_63_18
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

comp(16618..17364)
DNA (747bp) protein (249aa)
amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-) (EC:3.6.3.21)
Glutamine ABC transporter ATP-binding protein n=2 Tax=Firmicutes RepID=R6R6I6_9FIRM
Glutamine ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDC30012.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
L3_128_361G1_scaffold_63_19
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

comp(17354..18091)
DNA (738bp) protein (246aa)
Amino acid ABC transporter permease/substrate-binding protein n=2 Tax=Firmicutes RepID=R6Q2P5_9FIRM
Amino acid ABC transporter permease/substrate-binding protein {ECO:0000313|EMBL:CDC30015.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
polar amino acid ABC transporter inner membrane subunit
L3_128_361G1_scaffold_63_20
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18176..18985)
DNA (810bp) protein (270aa)
ABC transporter substrate-binding protein family 3 n=2 Tax=Firmicutes RepID=R6R6J1_9FIRM
ABC transporter substrate-binding protein family 3 {ECO:0000313|EMBL:CDD61316.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-)
L3_128_361G1_scaffold_63_21
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

comp(19309..20568)
DNA (1260bp) protein (420aa)
Chloride transporter ClC family n=2 Tax=Firmicutes RepID=R6QAH5_9FIRM
Chloride transporter ClC family {ECO:0000313|EMBL:CDC30019.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
Chloride channel protein EriC
L3_128_361G1_scaffold_63_22
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20811..23147)
DNA (2337bp) protein (779aa)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Clostridium sp. CAG:505 RepID=R7B8Q7_9CLOT
Integral membrane sensor signal transduction histidine kinase {ECO:0000313|EMBL:CDD61314.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
signal transduction histidine kinase
L3_128_361G1_scaffold_63_23
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

comp(23122..23820)
DNA (699bp) protein (233aa)
Two component transcriptional regulator winged helix family n=2 Tax=Firmicutes RepID=R6Q032_9FIRM
Two component transcriptional regulator winged helix family {ECO:0000313|EMBL:CDC30023.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
L3_128_361G1_scaffold_63_24
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24212..27604
DNA (3393bp) protein (1131aa)
Repeat protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YXJ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55360.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
cell surface protein
L3_128_361G1_scaffold_63_25
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27776..31462)
DNA (3687bp) protein (1229aa)
ATP-dependent helicase/nuclease subunit A {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00044589}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00274943};; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00145970};; ATP-dependent helicase/nuclease AddA {ECO:0000256|HAMAP-Rule:MF_01451}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
ATP-dependent helicase/nuclease subunit A n=1 Tax=Clostridium sp. CAG:505 RepID=R7B7N1_9CLOT
ATP-dependent helicase/nuclease subunit A
L3_128_361G1_scaffold_63_26
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31484..32062)
DNA (579bp) protein (193aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=R6Q2Q4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD61310.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
L3_128_361G1_scaffold_63_27
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32517..32789)
DNA (273bp) protein (91aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=R6QAI7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD61308.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
L3_128_361G1_scaffold_63_28
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

comp(32808..33275)
DNA (468bp) protein (156aa)
Transcriptional repressor NrdR n=2 Tax=Firmicutes RepID=R6QGR8_9FIRM
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
ATP-cone domain-containing protein
L3_128_361G1_scaffold_63_29
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33367..33630)
DNA (264bp) protein (88aa)
Sporulation protein YlmC/YmxH family n=1 Tax=Clostridium sp. CAG:505 RepID=R7B8Q3_9CLOT
Sporulation protein YlmC/YmxH family {ECO:0000313|EMBL:CDD61306.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
YlmC/YmxH family sporulation protein
L3_128_361G1_scaffold_63_30
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33891..36239
DNA (2349bp) protein (783aa)
ribonucleoside-triphosphate reductase class III catalytic subunit (EC:1.17.4.2)
Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Clostridium sp. CAG:505 RepID=R7AS45_9CLOT
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:CDD61305.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
Displaying items 1-30 of 107 in total

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