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L3_128_361G1_scaffold_74

Search features with annotation key words

Displaying items 1-30 of 175 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_361G1_scaffold_74_1
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(161..1441)
DNA (1281bp) protein (427aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
adenylosuccinate synthase (EC:6.3.4.4)
Adenylosuccinate synthetase n=3 Tax=Lachnospiraceae RepID=A7AZC2_RUMGN
L3_128_361G1_scaffold_74_2
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1557..3116)
DNA (1560bp) protein (520aa)
Phospholipase D domain protein {ECO:0000313|EMBL:EDN79128.1}; EC=3.1.-.- {ECO:0000313|EMBL:EDN79128.1};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes (EC:2.7.8.-)
Phospholipase D domain protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZC3_RUMGN
L3_128_361G1_scaffold_74_3
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3296..3568
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TXC6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67984.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L3_128_361G1_scaffold_74_4
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3673..5070)
DNA (1398bp) protein (466aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TQE2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67983.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
L3_128_361G1_scaffold_74_5
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5084..6748)
DNA (1665bp) protein (555aa)
Glutamine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00016670}; EC=6.1.1.18 {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00023088};; Glutaminyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00126}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
glutaminyl-tRNA synthetase (EC:6.1.1.18)
Glutamine--tRNA ligase n=4 Tax=Clostridiales RepID=A7AZC6_RUMGN
L3_128_361G1_scaffold_74_6
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6906..8381
DNA (1476bp) protein (492aa)
Transporter n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U9Z1_9FIRM
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
sodium:neurotransmitter symporter
L3_128_361G1_scaffold_74_7
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8438..9136)
DNA (699bp) protein (233aa)
Hydrolase, NUDIX family n=4 Tax=Clostridiales RepID=A7AZC8_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49835.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
ADP-ribose pyrophosphatase
L3_128_361G1_scaffold_74_8
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9218..10696)
DNA (1479bp) protein (493aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8C1G1_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49836.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_128_361G1_scaffold_74_9
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10713..11210)
DNA (498bp) protein (166aa)
Sigma-70 region 2 n=4 Tax=Clostridiales RepID=A7AZD0_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49837.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
RNA polymerase sigma factor, sigma-70 family
L3_128_361G1_scaffold_74_10
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11345..12640)
DNA (1296bp) protein (432aa)
UPF0597 protein RUMGNA_00647 n=3 Tax=Lachnospiraceae RepID=A7AZD1_RUMGN
UPF0597 protein HMPREF0991_00172 {ECO:0000256|HAMAP-Rule:MF_01845}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_128_361G1_scaffold_74_11
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12755..13102)
DNA (348bp) protein (116aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7AZD2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49839.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_128_361G1_scaffold_74_12
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13335..13853
DNA (519bp) protein (173aa)
Nitroreductase family protein n=3 Tax=Lachnospiraceae RepID=A7AZD3_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20570.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
nitroreductase
L3_128_361G1_scaffold_74_13
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13875..14321
DNA (447bp) protein (149aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518};; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
D-tyrosyl-tRNA(Tyr) deacylase (EC:3.1.-.-)
D-tyrosyl-tRNA(Tyr) deacylase n=3 Tax=Lachnospiraceae RepID=A7AZD4_RUMGN
L3_128_361G1_scaffold_74_14
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14316..14699)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TQC8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67973.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L3_128_361G1_scaffold_74_15
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14812..15036
DNA (225bp) protein (75aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7AZD6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:CCZ67972.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Predicted transcriptional regulator
L3_128_361G1_scaffold_74_16
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15129..15392)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZD7_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN79142.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
L3_128_361G1_scaffold_74_17
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15556..16179)
DNA (624bp) protein (208aa)
RNA polymerase sigma factor n=3 Tax=Lachnospiraceae RepID=A7AZD8_RUMGN
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
RNA polymerase, sigma 30 subunit, SigH
L3_128_361G1_scaffold_74_18
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16199..16966)
DNA (768bp) protein (256aa)
rRNA methylase, putative, group 3 (EC:2.1.1.-)
RNA methyltransferase, TrmH family, group 3 n=4 Tax=Clostridiales RepID=A7AZD9_RUMGN
RNA methyltransferase {ECO:0000313|EMBL:EGN49845.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_128_361G1_scaffold_74_19
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16953..17420)
DNA (468bp) protein (156aa)
Mini-ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_01468}; Short=Mini-3 {ECO:0000256|HAMAP-Rule:MF_01468};; Short=Mini-RNase 3 {ECO:0000256|HAMAP-Rule:MF_01468};; EC=3.1.26.- {ECO:0000256|HAMAP-Rule:MF_01468};; Mini-RNase III {ECO:0000256|HAMAP-Rule:MF_01468}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Mini-ribonuclease 3 n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TXB0_9FIRM
hypothetical protein
L3_128_361G1_scaffold_74_20
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17405..18811)
DNA (1407bp) protein (469aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase n=4 Tax=Clostridiales RepID=A7AZE1_RUMGN
L3_128_361G1_scaffold_74_21
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18798..19505)
DNA (708bp) protein (236aa)
Serine acetyltransferase {ECO:0000256|PIRNR:PIRNR000441}; EC=2.3.1.30 {ECO:0000256|PIRNR:PIRNR000441};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
serine O-acetyltransferase (EC:2.3.1.30)
Serine acetyltransferase n=4 Tax=Clostridiales RepID=A7AZE2_RUMGN
L3_128_361G1_scaffold_74_22
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19849..20976)
DNA (1128bp) protein (376aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BZN6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49849.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_128_361G1_scaffold_74_23
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20991..21536)
DNA (546bp) protein (182aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=3 Tax=Lachnospiraceae RepID=A7AZE4_RUMGN
L3_128_361G1_scaffold_74_24
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21576..21959)
DNA (384bp) protein (128aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7AZE5_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49851.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_128_361G1_scaffold_74_25
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22333..23565)
DNA (1233bp) protein (411aa)
aminopeptidase II (EC:3.4.11.-)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TQB6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67963.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L3_128_361G1_scaffold_74_26
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23643..24818)
DNA (1176bp) protein (392aa)
Transporter CPA2 family n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UGN7_9FIRM
Transporter CPA2 family {ECO:0000313|EMBL:CCZ67962.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
sodium/proton antiporter, CPA1 family (TC 2.A.36)
L3_128_361G1_scaffold_74_27
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25481..29236)
DNA (3756bp) protein (1252aa)
phosphoribosylformylglycinamidine synthase (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UBR0_9FIRM
Phosphoribosylformylglycinamidine synthase {ECO:0000313|EMBL:CCZ68581.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L3_128_361G1_scaffold_74_28
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29334..30053)
DNA (720bp) protein (240aa)
TIGR01906 family protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TS77_9FIRM
TIGR01906 family protein {ECO:0000313|EMBL:CCZ68580.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
integral membrane protein
L3_128_361G1_scaffold_74_29
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30193..31068
DNA (876bp) protein (292aa)
LysR substrate binding domain protein n=4 Tax=Clostridiales RepID=A7AYJ1_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49860.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Transcriptional regulator
L3_128_361G1_scaffold_74_30
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31076..33427)
DNA (2352bp) protein (784aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8C0P1_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49861.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Rad3-related DNA helicases
Displaying items 1-30 of 175 in total

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