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L3_128_361G1_scaffold_133

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_361G1_scaffold_133_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..423)
DNA (423bp) protein (141aa)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomeroreductase {ECO:0000256|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
Ketol-acid reductoisomerase n=7 Tax=Bifidobacterium bifidum RepID=E3ELJ5_BIFBS
ilvC1; ketol-acid reductoisomerase
L3_128_361G1_scaffold_133_2
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(669..2039)
DNA (1371bp) protein (457aa)
Transporter, MFS superfamily n=2 Tax=Bifidobacterium bifidum RepID=E4NYI2_BIFBP
MFS transporter, metabolite:H+ symporter (MHS) family protein {ECO:0000313|EMBL:EFR49521.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
MFS superfamily transporter
L3_128_361G1_scaffold_133_3
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2630..4315)
DNA (1686bp) protein (562aa)
Transporter, major facilitator family protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2DW51_BIFBI
ScrT Sucrose transporter {ECO:0000313|EMBL:KFI42261.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
putative transmembrane protein
L3_128_361G1_scaffold_133_4
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4366..4797)
DNA (432bp) protein (144aa)
sucrose phosphorylase (EC:2.4.1.7)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4V7B2_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EFR49519.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
L3_128_361G1_scaffold_133_5
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4880..5926)
DNA (1047bp) protein (349aa)
LacI family transcriptional regulator, putative sucrose operon repressor n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ELJ1_BIFBS
LacI family sucrose operon transcriptional repressor
LacI family transcriptional regulator, putative sucrose operon repressor {ECO:0000313|EMBL:ADO52386.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_128_361G1_scaffold_133_6
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6085..6453)
DNA (369bp) protein (123aa)
Putative fluoride ion transporter CrcB n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4V7B0_BIFBI
crcB2; camphor resistance protein CrcB
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_128_361G1_scaffold_133_7
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6455..7399)
DNA (945bp) protein (315aa)
Putative fluoride ion transporter CrcB n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NYH7_BIFBP
crcB; family protein CrcB
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L3_128_361G1_scaffold_133_8
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7474..8760)
DNA (1287bp) protein (429aa)
purA; adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
Adenylosuccinate synthetase n=2 Tax=Bifidobacterium bifidum RepID=E4NYH6_BIFBP
L3_128_361G1_scaffold_133_9
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8814..9680)
DNA (867bp) protein (289aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ELI7_BIFBS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO52382.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_128_361G1_scaffold_133_10
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9680..11086)
DNA (1407bp) protein (469aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ELI6_BIFBS
RecF/RecN/SMC N terminal domain
Uncharacterized protein {ECO:0000313|EMBL:ADO52381.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_128_361G1_scaffold_133_11
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11221..12288)
DNA (1068bp) protein (356aa)
fbaA; fructose-bisphosphate aldolase (EC:4.1.2.13)
Fructose-bisphosphate aldolase, class II {ECO:0000313|EMBL:AFL03729.1}; EC=4.1.2.13 {ECO:0000313|EMBL:AFL03729.1};; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
Fructose-bisphosphate aldolase, class II n=2 Tax=Bifidobacterium RepID=I3WFR6_BIFBI
L3_128_361G1_scaffold_133_12
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12427..13722
DNA (1296bp) protein (432aa)
Polysaccharide deacetylase n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ELI4_BIFBS
polysaccharide deacetylase
Polysaccharide deacetylase {ECO:0000313|EMBL:ADO52379.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_128_361G1_scaffold_133_13
unknown

Not on your lists

14183..14518
DNA (336bp) protein (112aa)

This feature has no annotations

L3_128_361G1_scaffold_133_14
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14709..16601)
DNA (1893bp) protein (631aa)
Mobilisation protein n=2 Tax=Bifidobacterium dentium RepID=D2Q723_BIFDB
mobilisation protein
Mobilisation protein {ECO:0000313|EMBL:ADB08769.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
L3_128_361G1_scaffold_133_15
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16601..16879)
DNA (279bp) protein (93aa)
Bacterial mobilization protein (MobC) n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ELI1_BIFBS
mobilization protein MobC
Bacterial mobilization protein (MobC) {ECO:0000313|EMBL:ADO52376.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_128_361G1_scaffold_133_16
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17676..18332
DNA (657bp) protein (219aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ELI0_BIFBS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO52375.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_128_361G1_scaffold_133_17
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18352..18750
DNA (399bp) protein (133aa)
Putative polyketide cyclase / dehydrase and lipid transferase n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ELH9_BIFBS
polyketide cyclase / dehydrase and lipid transferase
Putative polyketide cyclase / dehydrase and lipid transferase {ECO:0000313|EMBL:ADO52374.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_128_361G1_scaffold_133_18
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18747..19292
DNA (546bp) protein (182aa)
GCN5-related N-acetyltransferase n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ELH8_BIFBS
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ADO52373.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_128_361G1_scaffold_133_19
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19362..20036)
DNA (675bp) protein (225aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ELH7_BIFBS
nucleotidyltransferase domain-containing protein
Uncharacterized protein {ECO:0000313|EMBL:ADO52372.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_128_361G1_scaffold_133_20
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20391..21731)
DNA (1341bp) protein (447aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=R6GES8_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDB22895.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L3_128_361G1_scaffold_133_21
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22387..24060
DNA (1674bp) protein (558aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ELH3_BIFBS
Uncharacterized protein {ECO:0000313|EMBL:ADO52368.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
hypothetical protein
L3_128_361G1_scaffold_133_22
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24057..26471
DNA (2415bp) protein (805aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ELH2_BIFBS
Uncharacterized protein {ECO:0000313|EMBL:ADO52367.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
hypothetical protein
L3_128_361G1_scaffold_133_23
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27198..28136)
DNA (939bp) protein (313aa)
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
Protease HtpX homolog n=2 Tax=Bifidobacterium bifidum RepID=E4NYG5_BIFBP
htpX; endopeptidase HtpX
L3_128_361G1_scaffold_133_24
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28308..29759)
DNA (1452bp) protein (484aa)
Pyridine nucleotide-disulfide oxidoreductase n=3 Tax=Bifidobacterium RepID=E4V795_BIFBI
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EFR49502.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
fprA; ferredoxin--NADP reductase
L3_128_361G1_scaffold_133_25
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29930..32131)
DNA (2202bp) protein (734aa)
ziaA; zinc-transporting ATPase (EC:3.6.3.5)
Cation transport ATPase n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6HAB9_9BIFI
Cation transport ATPase {ECO:0000313|EMBL:CDB23157.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L3_128_361G1_scaffold_133_26
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32510..34399)
DNA (1890bp) protein (630aa)
degP; trypsin-like serine protease DegP (EC:3.4.21.108)
DegP trypsin-like serine protease n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NYG2_BIFBP
Trypsin-like serine protease {ECO:0000313|EMBL:ADO52363.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_128_361G1_scaffold_133_27
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34767..36068
DNA (1302bp) protein (434aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
Queuine tRNA-ribosyltransferase n=2 Tax=Bifidobacterium RepID=R6GP65_9BIFI
tgt; queuine tRNA-ribosyltransferase
L3_128_361G1_scaffold_133_28
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36708..37184)
DNA (477bp) protein (159aa)
Acetyltransferase (GNAT) family n=2 Tax=Bifidobacterium RepID=E3ELG6_BIFBS
GNAT family acetyltransferase
Acetyltransferase (GNAT) family {ECO:0000313|EMBL:CDB23022.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L3_128_361G1_scaffold_133_29
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37202..38020)
DNA (819bp) protein (273aa)
bloH; carboxylesterase (EC:3.1.1.1)
Carboxylesterase n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GC89_9BIFI
Carboxylesterase {ECO:0000313|EMBL:CDB23023.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L3_128_361G1_scaffold_133_30
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(38142..38474)
DNA (333bp) protein (111aa)
UPF0145 protein BBIF_0154 n=5 Tax=Bifidobacterium RepID=E3ELG4_BIFBS
hypothetical protein
UPF0145 protein BBNG_00041 {ECO:0000256|HAMAP-Rule:MF_00338}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
Displaying items 1-30 of 63 in total

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