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L3_128_361G1_scaffold_161

Search features with annotation key words

Displaying items 1-30 of 131 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_361G1_scaffold_161_1
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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393..977
DNA (585bp) protein (195aa)
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D3P6_9CLOT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEG54036.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
transcriptional regulator, XRE family
L3_128_361G1_scaffold_161_2
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1018..2223)
DNA (1206bp) protein (402aa)
Putative uncharacterized protein n=3 Tax=Clostridium RepID=E7GT27_CLOSY
Putative homoserine kinase {ECO:0000313|EMBL:EHF03150.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
proposed homoserine kinase
L3_128_361G1_scaffold_161_3
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2383..3144)
DNA (762bp) protein (254aa)
TipAS antibiotic-recognition domain protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P225_9FIRM
TipAS antibiotic-recognition domain protein {ECO:0000313|EMBL:EDM97695.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
transcriptional regulator, MarR family
L3_128_361G1_scaffold_161_4
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3247..4644)
DNA (1398bp) protein (466aa)
Transporter n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VTI4_9CLOT
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
Na+-dependent transporter
L3_128_361G1_scaffold_161_5
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4872..6122)
DNA (1251bp) protein (417aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VSC8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ35379.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
glycosyl transferase family protein
L3_128_361G1_scaffold_161_6
unknown

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6207..6590
DNA (384bp) protein (128aa)

This feature has no annotations

L3_128_361G1_scaffold_161_7
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6583..7899
DNA (1317bp) protein (439aa)
UPI0002E419B0 related cluster n=1 Tax=unknown RepID=UPI0002E419B0
PBSX family phage terminase, large subunit
PBSX family phage terminase, large subunit {ECO:0000313|EMBL:CDZ24658.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
L3_128_361G1_scaffold_161_8
unknown

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7924..8127
DNA (204bp) protein (68aa)

This feature has no annotations

L3_128_361G1_scaffold_161_9
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8117..9658
DNA (1542bp) protein (514aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2D8D1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI75761.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_128_361G1_scaffold_161_10
Clostridium sp. BNL1100, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9627..10085
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BNL1100 RepID=H2JEW8_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEY66606.1}; TaxID=755731 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BNL1100.;"
L3_128_361G1_scaffold_161_11
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10185..11210
DNA (1026bp) protein (342aa)
Uncharacterized protein (Fragment) n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BCA9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI75759.1}; Flags: Fragment;; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_128_361G1_scaffold_161_12
unknown

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11268..11636
DNA (369bp) protein (123aa)

This feature has no annotations

L3_128_361G1_scaffold_161_13
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11636..13450
DNA (1815bp) protein (605aa)
UPI0002D894E8 related cluster n=1 Tax=unknown RepID=UPI0002D894E8
Uncharacterized protein {ECO:0000313|EMBL:CDC68585.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
hypothetical protein
L3_128_361G1_scaffold_161_14
unknown

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13466..13624
DNA (159bp) protein (53aa)

This feature has no annotations

L3_128_361G1_scaffold_161_15
unknown

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13661..14671
DNA (1011bp) protein (337aa)

This feature has no annotations

L3_128_361G1_scaffold_161_16
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14868..16739
DNA (1872bp) protein (624aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VWM8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ35327.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
hypothetical protein
L3_128_361G1_scaffold_161_17
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16874..17380)
DNA (507bp) protein (169aa)
Anaerobic ribonucleoside-triphosphate reductase-activating protein {ECO:0000256|PIRNR:PIRNR000368}; EC=1.97.1.- {ECO:0000256|PIRNR:PIRNR000368};; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
Anaerobic ribonucleoside-triphosphate reductase-activating protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VSI3_9CLOT
anaerobic ribonucleoside-triphosphate reductase activating protein
L3_128_361G1_scaffold_161_18
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17380..17583)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VX37_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ35457.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
hypothetical protein
L3_128_361G1_scaffold_161_19
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17626..19944)
DNA (2319bp) protein (773aa)
ribonucleoside-triphosphate reductase class III catalytic subunit (EC:1.17.4.2)
Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VT94_9CLOT
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:EOQ35456.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
L3_128_361G1_scaffold_161_20
Eubacterium sp. CAG:841, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20216..20746
DNA (531bp) protein (177aa)
Mn-containing catalase n=1 Tax=Eubacterium sp. CAG:841 RepID=R7FPI9_9FIRM
Mn-containing catalase {ECO:0000313|EMBL:CDE17214.1}; TaxID=1262894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:841.;"
cotJC2; CotJC protein
L3_128_361G1_scaffold_161_21
Treponema maltophilum, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

20824..21207
DNA (384bp) protein (128aa)
rbo; rubredoxin oxidoreductase (EC:1.15.1.1)
Desulfoferrodoxin n=1 Tax=Treponema maltophilum ATCC 51939 RepID=S3KDJ0_TREMA
Desulfoferrodoxin {ECO:0000313|EMBL:EPF30257.1}; TaxID=1125699 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema maltophilum ATCC 51939.;"
L3_128_361G1_scaffold_161_22
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21307..21999
DNA (693bp) protein (231aa)
Manganese catalase {ECO:0000313|EMBL:CEO20587.1}; EC=1.11.1.6 {ECO:0000313|EMBL:CEO20587.1};; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
catalase (EC:1.11.1.6)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:624 RepID=R7MIG3_9FIRM
L3_128_361G1_scaffold_161_23
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22146..23042)
DNA (897bp) protein (299aa)
Electron transport complex, rnfabcdge type, B subunit n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W612_9CLOT
Electron transport complex, rnfabcdge type, B subunit {ECO:0000313|EMBL:EOQ38587.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
rnfB; electron transport complex protein RnfB
L3_128_361G1_scaffold_161_24
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23069..23701)
DNA (633bp) protein (211aa)
Electron transport complex, rnfabcdge type, A subunit n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W167_9CLOT
Electron transport complex subunit A {ECO:0000256|HAMAP-Rule:MF_00459}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
rnfA; electron transport complex protein RnfA
L3_128_361G1_scaffold_161_25
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23702..24331)
DNA (630bp) protein (210aa)
Electron transport complex, rnfabcdge type, E subunit n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W1K5_9CLOT
Electron transport complex subunit E {ECO:0000256|HAMAP-Rule:MF_00478}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
rnfE; electron transport complex protein RnfE
L3_128_361G1_scaffold_161_26
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24347..24925)
DNA (579bp) protein (193aa)
Electron transport complex, rnfabcdge type, G subunit n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W0V7_9CLOT
Electron transport complex subunit G {ECO:0000256|HAMAP-Rule:MF_00479}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
electron transport complex, RnfABCDGE type, G subunit
L3_128_361G1_scaffold_161_27
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24928..25923)
DNA (996bp) protein (332aa)
Electron transport complex, rnfabcdge type, D subunit n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W233_9CLOT
Electron transport complex subunit D {ECO:0000256|HAMAP-Rule:MF_00462}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
rnfD; electron transport complex protein RnfD
L3_128_361G1_scaffold_161_28
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25938..27344)
DNA (1407bp) protein (469aa)
Electron transport complex, rnfabcdge type, C subunit n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W615_9CLOT
Electron transport complex subunit C {ECO:0000256|HAMAP-Rule:MF_00461}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
rnfC; electron transport complex protein RnfC
L3_128_361G1_scaffold_161_29
unknown

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comp(27707..28852)
DNA (1146bp) protein (382aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI00034CF058
putative response receiver/sensor histidine kinase, hybrid
L3_128_361G1_scaffold_161_30
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29031..30059
DNA (1029bp) protein (343aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W1K9_9CLOT
Displaying items 1-30 of 131 in total

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