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L3_128_361G1_scaffold_240

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Displaying items 1-30 of 129 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_361G1_scaffold_240_1
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..675
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TWP7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67739.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
sugar (Glycoside-Pentoside-Hexuronide) transporter
L3_128_361G1_scaffold_240_2
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

677..2113
DNA (1437bp) protein (479aa)
alpha-L-fucosidase (EC:3.2.1.51)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TPZ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67740.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L3_128_361G1_scaffold_240_3
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2189..4090
DNA (1902bp) protein (634aa)
Beta-galactosidase/beta-glucuronidase (EC:3.2.1.23)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WVQ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX69369.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
L3_128_361G1_scaffold_240_4
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4074..5021
DNA (948bp) protein (316aa)
Beta-galactosidase {ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|SAAS:SAAS00046613};; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
Beta galactosidase small chain. (EC:3.2.1.23)
Beta galactosidase small subunit n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WVQ4_9FIRM
L3_128_361G1_scaffold_240_5
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5274..5417
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UAS7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68276.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L3_128_361G1_scaffold_240_6
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5383..5970
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UAS7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68276.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
transcriptional regulator, AraC family
L3_128_361G1_scaffold_240_7
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6080..6853
DNA (774bp) protein (258aa)
Predicted DNA-binding proteins n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UHI0_9FIRM
Predicted DNA-binding proteins {ECO:0000313|EMBL:CCZ68277.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Predicted DNA-binding proteins
L3_128_361G1_scaffold_240_8
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7063..8526
DNA (1464bp) protein (488aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TR58_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN46563.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
conserved hypothetical protein TIGR02677
L3_128_361G1_scaffold_240_9
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8523..9668
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TY61_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68279.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
conserved hypothetical protein TIGR02678
L3_128_361G1_scaffold_240_10
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9661..10212
DNA (552bp) protein (184aa)
TIGR02680 family protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TRD9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN46561.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
conserved hypothetical protein TIGR02680
L3_128_361G1_scaffold_240_11
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10326..13568
DNA (3243bp) protein (1081aa)
TIGR02680 family protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TRD9_9FIRM
TIGR02680 family protein {ECO:0000313|EMBL:CCZ68280.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
conserved hypothetical protein TIGR02680
L3_128_361G1_scaffold_240_12
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13565..13906
DNA (342bp) protein (114aa)
Putative TIGR02679 family protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UAT3_9FIRM
Putative TIGR02679 family protein {ECO:0000313|EMBL:CCZ68281.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L3_128_361G1_scaffold_240_13
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14050..14475
DNA (426bp) protein (142aa)
TIGR02679 family protein n=2 Tax=Lachnospiraceae RepID=V8BY62_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN46560.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_128_361G1_scaffold_240_14
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14502..15734
DNA (1233bp) protein (411aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BXC1_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN46559.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_128_361G1_scaffold_240_15
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15817..16278
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TR62_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68283.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L3_128_361G1_scaffold_240_16
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16278..16742
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TY66_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68284.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L3_128_361G1_scaffold_240_17
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16978..18516
DNA (1539bp) protein (513aa)
Asparagine synthase (glutamine-hydrolyzing) (EC:6.3.5.4)
Asparagine synthetase n=2 Tax=Lachnospiraceae RepID=F7JYP1_9FIRM
Asparagine synthase (Glutamine-hydrolyzing) {ECO:0000313|EMBL:ETD19423.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L3_128_361G1_scaffold_240_18
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18570..20003)
DNA (1434bp) protein (478aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BX89_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN46556.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
pyridoxal-dependent decarboxylase
L3_128_361G1_scaffold_240_19
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20128..21042
DNA (915bp) protein (305aa)
LysR substrate binding domain protein n=3 Tax=Lachnospiraceae RepID=A7B1V1_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN46555.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
LysR family transcriptional regulator
L3_128_361G1_scaffold_240_20
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21045..22127)
DNA (1083bp) protein (361aa)
Dihydrodipicolinate reductase domain protein n=3 Tax=Lachnospiraceae RepID=A7B1V2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN46554.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_128_361G1_scaffold_240_21
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22358..23698
DNA (1341bp) protein (447aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B1V3_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN78225.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L3_128_361G1_scaffold_240_22
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23715..24671
DNA (957bp) protein (319aa)
Peptidase, U32 family n=3 Tax=Lachnospiraceae RepID=A7B1V4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD19418.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Collagenase and related proteases
L3_128_361G1_scaffold_240_23
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24665..25678)
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UAU5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68291.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L3_128_361G1_scaffold_240_24
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25840..26385
DNA (546bp) protein (182aa)
BioY family protein n=2 Tax=Clostridiales RepID=A7B1X3_RUMGN
BioY family protein {ECO:0000313|EMBL:EDN78245.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L3_128_361G1_scaffold_240_25
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26455..26886
DNA (432bp) protein (144aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B1X4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD19404.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
hypothetical protein
L3_128_361G1_scaffold_240_26
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27007..28101
DNA (1095bp) protein (365aa)
DNA-binding helix-turn-helix protein n=3 Tax=Lachnospiraceae RepID=A7B1X5_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN46537.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
XRE family transcriptional regulator
L3_128_361G1_scaffold_240_27
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28152..29201)
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B1X6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN78248.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L3_128_361G1_scaffold_240_28
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29226..29570)
DNA (345bp) protein (115aa)
Hydrogenase nickel insertion protein HypA n=3 Tax=Lachnospiraceae RepID=V8BY34_RUMGN
Hydrogenase nickel insertion protein HypA {ECO:0000313|EMBL:ETD19401.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
hydrogenase nickel incorporation protein HypA
L3_128_361G1_scaffold_240_29
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29582..32278)
DNA (2697bp) protein (899aa)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B1X8_RUMGN
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EDN78250.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
NADPH-dependent glutamate synthase GltA2
L3_128_361G1_scaffold_240_30
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32275..32961)
DNA (687bp) protein (229aa)
Hydrogenase accessory protein HypB n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B1X9_RUMGN
Hydrogenase accessory protein HypB {ECO:0000313|EMBL:EDN78251.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hydrogenase accessory protein HypB
Displaying items 1-30 of 129 in total

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