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L3_128_361G1_scaffold_259

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_361G1_scaffold_259_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(72..182)
DNA (111bp) protein (37aa)
Uncharacterized protein n=4 Tax=Bifidobacterium RepID=B3DSI7_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPD74728.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L3_128_361G1_scaffold_259_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

575..1384
DNA (810bp) protein (270aa)
Transcriptional regulator, TetR family n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZTS5_BIFLJ
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ADH00282.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L3_128_361G1_scaffold_259_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1541..2812
DNA (1272bp) protein (424aa)
Macrolide-efflux protein, MFS member n=4 Tax=Bifidobacterium breve RepID=F9XYZ3_BIFBU
Macrolide-efflux protein, MFS member
Transporter, major facilitator family protein {ECO:0000313|EMBL:EFE89400.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L3_128_361G1_scaffold_259_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2996..3334)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GSS2_BIFLS
Hypothetical protein
Toxin-antitoxin system, antitoxin component, Xre family {ECO:0000313|EMBL:KFI69923.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
L3_128_361G1_scaffold_259_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3452..4708)
DNA (1257bp) protein (419aa)
Uncharacterized protein n=4 Tax=Bifidobacterium RepID=B7GSS3_BIFLS
HipA-like C-terminal domain protein
Uncharacterized protein {ECO:0000313|EMBL:ACJ52753.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L3_128_361G1_scaffold_259_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4882..5127
DNA (246bp) protein (82aa)
RelB antitoxin n=7 Tax=Bifidobacterium RepID=B7GSS4_BIFLS
Hypothetical protein
Addiction module antitoxin, RelB/DinJ family {ECO:0000313|EMBL:EFE89397.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L3_128_361G1_scaffold_259_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5114..5437
DNA (324bp) protein (108aa)
PEMK-like protein n=3 Tax=Bifidobacterium breve RepID=F9XYY9_BIFBU
PEMK-like protein
Uncharacterized protein {ECO:0000313|EMBL:EPD74712.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L3_128_361G1_scaffold_259_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5654..6268)
DNA (615bp) protein (205aa)
Uncharacterized protein n=4 Tax=Bifidobacterium RepID=D4BP08_BIFBR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ21010.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L3_128_361G1_scaffold_259_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6416..6775)
DNA (360bp) protein (120aa)
Methyltransferase type 11 n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZTR9_BIFLJ
Methyltransferase type 11 {ECO:0000313|EMBL:KFI69918.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Hypothetical protein with methyl transferase domain
L3_128_361G1_scaffold_259_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6871..7377
DNA (507bp) protein (169aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=S3AES6_BIFBR
Inner membrane protein YccF {ECO:0000313|EMBL:CEF11154.1}; TaxID=1682 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis.;"
hypothetical protein
L3_128_361G1_scaffold_259_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7922..9187
DNA (1266bp) protein (422aa)
Filamentation induced by cAMP protein Fic n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GSS9_BIFLS
hypothetical protein
Filamentation induced by cAMP protein Fic {ECO:0000313|EMBL:ACJ52759.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L3_128_361G1_scaffold_259_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9343..10437)
DNA (1095bp) protein (365aa)
Ribosome-binding ATPase YchF n=2 Tax=Bifidobacterium longum RepID=B3DSJ4_BIFLD
GTP-dependent nucleic acid-binding protein EngD
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L3_128_361G1_scaffold_259_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10455..11255)
DNA (801bp) protein (267aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
Pyrroline-5-carboxylate reductase n=3 Tax=Bifidobacterium RepID=B3DSJ5_BIFLD
pyrroline-5-carboxylate reductase
L3_128_361G1_scaffold_259_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11330..12673)
DNA (1344bp) protein (448aa)
Alpha/beta hydrolase fold protein n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5XXI2_9BIFI
Proline iminopeptidase {ECO:0000313|EMBL:KEY22064.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
mhpC2; hydrolse
L3_128_361G1_scaffold_259_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12851..15460
DNA (2610bp) protein (870aa)
Histidine kinase family protein n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2I0D1_BIFLN
Signal transduction histidine kinase {ECO:0000313|EMBL:KFI69912.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
signal transduction histidine kinase
L3_128_361G1_scaffold_259_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15536..16282
DNA (747bp) protein (249aa)
Two-component response regulator n=2 Tax=Bifidobacterium longum RepID=E8MHV5_BIFL2
LuxR family transcriptional regulator {ECO:0000313|EMBL:KEY32781.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
two-component response regulator
L3_128_361G1_scaffold_259_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16374..19016)
DNA (2643bp) protein (881aa)
Efflux ABC transporter, permease protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XX51_9BIFI
ABC transporter permease {ECO:0000313|EMBL:KEY32780.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
ABC transporter permease
L3_128_361G1_scaffold_259_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19058..19849)
DNA (792bp) protein (264aa)
ABC transporter {ECO:0000313|EMBL:KFI69909.1}; EC=3.6.3.28 {ECO:0000313|EMBL:KFI69909.1};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
ABC transporter, ATP-binding protein n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5EAG8_BIFLI
ABC transporter
L3_128_361G1_scaffold_259_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20198..21514)
DNA (1317bp) protein (439aa)
O-acetylhomoserine aminocarboxypropyltransferase {ECO:0000313|EMBL:KHD94374.1}; EC=2.5.1.49 {ECO:0000313|EMBL:KHD94374.1};; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
O-acetylhomoserine sulfhydrylase n=7 Tax=Bifidobacterium RepID=B3DSK1_BIFLD
ahsA2; O-acetylhomoserine sulfhydrylase
L3_128_361G1_scaffold_259_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21990..22862
DNA (873bp) protein (291aa)
Pyridoxal kinase {ECO:0000256|SAAS:SAAS00088591}; EC=2.7.1.35 {ECO:0000256|SAAS:SAAS00088591};; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
Phosphomethylpyrimidine kinase type-1 n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GSU3_BIFLS
Phosphomethylpyrimidine kinase type-1
L3_128_361G1_scaffold_259_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23098..23601
DNA (504bp) protein (168aa)
UPF0102 protein BLJ_0797 n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZTQ7_BIFLJ
hypothetical protein
UPF0102 protein BLIC_a01851 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=1682 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis.;"
L3_128_361G1_scaffold_259_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23663..25198
DNA (1536bp) protein (512aa)
Mg chelatase, subunit ChlI n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZTQ6_BIFLJ
ATPase AAA
Mg chelatase, subunit ChlI {ECO:0000313|EMBL:ADH00262.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L3_128_361G1_scaffold_259_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25195..26895
DNA (1701bp) protein (567aa)
Putative DNA protecting protein DprA n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3B6Q0_BIFLN
Putative DNA protecting protein DprA {ECO:0000313|EMBL:KFI69904.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
DNA protecting protein DprA
L3_128_361G1_scaffold_259_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26952..28817
DNA (1866bp) protein (622aa)
Succinate dehydrogenase n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZTQ4_BIFLJ
Succinate dehydrogenase flavoprotein subunit {ECO:0000313|EMBL:KFI69903.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
succinate dehydrogenase
L3_128_361G1_scaffold_259_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28912..29877
DNA (966bp) protein (322aa)
Succinate dehydrogenase and fumarate reductase iron-sulfur protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GSU8_BIFLS
Succinate dehydrogenase and fumarate reductase iron-sulfur protein {ECO:0000313|EMBL:KFI69902.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
succinate dehydrogenase and fumarate reductase iron-sulfur protein
L3_128_361G1_scaffold_259_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29970..30635
DNA (666bp) protein (222aa)
O-methyltransferase, family 3 n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZTQ2_BIFLJ
O-methyltransferase, family 3 {ECO:0000313|EMBL:KFI69901.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
O-methyltransferase, family 3
L3_128_361G1_scaffold_259_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30681..31622)
DNA (942bp) protein (314aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZTQ1_BIFLJ
Putative Rossmann fold nucleotide-binding protein {ECO:0000313|EMBL:KFI69900.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
hypothetical protein
L3_128_361G1_scaffold_259_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31794..33212)
DNA (1419bp) protein (473aa)
Na(+)/H(+) antiporter NhaA n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZTQ0_BIFLJ
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Na+/H+ antiporter NhaA
L3_128_361G1_scaffold_259_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33724..35103)
DNA (1380bp) protein (460aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZTP9_BIFLJ
clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L3_128_361G1_scaffold_259_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35225..35926)
DNA (702bp) protein (234aa)
clpP; Clp protease (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
ATP-dependent Clp protease proteolytic subunit n=2 Tax=Bifidobacterium longum RepID=D6ZTP8_BIFLJ
Displaying items 1-30 of 50 in total

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