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L3_128_361G1_scaffold_260

Search features with annotation key words

Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_361G1_scaffold_260_1
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..636
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P439_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC15484.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
hypothetical protein
L3_128_361G1_scaffold_260_2
unknown

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645..902
DNA (258bp) protein (86aa)

This feature has no annotations

L3_128_361G1_scaffold_260_3
unknown

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938..1786
DNA (849bp) protein (283aa)

This feature has no annotations

L3_128_361G1_scaffold_260_4
Peptoniphilus indolicus, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1895..2614
DNA (720bp) protein (240aa)
DNA-directed RNA polymerase sigma subunit SigB {ECO:0000313|EMBL:EGY80517.1}; EC=2.7.7.6 {ECO:0000313|EMBL:EGY80517.1};; TaxID=997350 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus indolicus ATCC 29427.;"
DNA-directed RNA polymerase sigma subunit SigB n=1 Tax=Peptoniphilus indolicus ATCC 29427 RepID=G4D1R9_9FIRM
rpoD; RNA polymerase sigma factor RpoD
L3_128_361G1_scaffold_260_5
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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2638..3102
DNA (465bp) protein (155aa)
Signal peptidase I {ECO:0000256|RuleBase:RU003993}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU003993};; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
signal peptidase I (EC:3.4.21.89)
Signal peptidase I n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6REZ0_9FIRM
L3_128_361G1_scaffold_260_6
unknown

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3179..3352
DNA (174bp) protein (58aa)

This feature has no annotations

L3_128_361G1_scaffold_260_7
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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3528..4247
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R4N5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC43903.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L3_128_361G1_scaffold_260_8
unknown

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4320..4847
DNA (528bp) protein (176aa)

This feature has no annotations

L3_128_361G1_scaffold_260_9
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

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4934..6373
DNA (1440bp) protein (480aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MM02_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS68827.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
hypothetical protein
L3_128_361G1_scaffold_260_10
unknown

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6473..6679
DNA (207bp) protein (69aa)

This feature has no annotations

L3_128_361G1_scaffold_260_11

Not on your lists

6682..6885
DNA (204bp) protein (68aa)
Transposase-like protein B (Fragment) n=2 Tax=human gut metagenome RepID=K1T578_9ZZZZ
Transposase-like protein B {ECO:0000313|EMBL:EKC61430.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
transposase, IS605 OrfB family, central region
L3_128_361G1_scaffold_260_12
Entamoeba invadens, Entamoeba, Eukaryota

Not on your lists

7142..9727
DNA (2586bp) protein (862aa)
Uncharacterized protein n=1 Tax=Apis mellifera RepID=H9KEY7_APIME
Trichohyalin, putative {ECO:0000313|EMBL:ELP92258.1}; TaxID=370355 species="Eukaryota; Amoebozoa; Archamoebae; Entamoebidae; Entamoeba.;" source="Entamoeba invadens IP1.;"
protein of unknown function
L3_128_361G1_scaffold_260_13
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9742..11001
DNA (1260bp) protein (420aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MCS4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS68829.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
L3_128_361G1_scaffold_260_14
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11119..15114
DNA (3996bp) protein (1332aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
DNA polymerase III, alpha subunit (EC:2.7.7.7)
DNA polymerase III, alpha subunit n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MCV7_9FIRM
L3_128_361G1_scaffold_260_15
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15139..15810)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MDU5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS68831.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
L3_128_361G1_scaffold_260_16
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15971..18094
DNA (2124bp) protein (708aa)
ATP-dependent exoDNAse (exonuclease V), alpha subunit-helicase superfamily I member (EC:3.1.11.5)
RecD/TraA family helicase n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MM06_9FIRM
RecD/TraA family helicase {ECO:0000313|EMBL:EOS68832.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
L3_128_361G1_scaffold_260_17
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18171..19193
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MDF8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS68833.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
L3_128_361G1_scaffold_260_18
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19321..20637
DNA (1317bp) protein (439aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MPN9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS69762.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
L3_128_361G1_scaffold_260_19
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20652..21923
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MG35_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS69763.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
conjugative transfer protein
L3_128_361G1_scaffold_260_20
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21937..24336
DNA (2400bp) protein (800aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MG35_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS69763.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
hypothetical protein
L3_128_361G1_scaffold_260_21
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24385..27384
DNA (3000bp) protein (1000aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MFC1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS69764.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
L3_128_361G1_scaffold_260_22
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27536..28672
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MGF2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS69766.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
hypothetical protein
L3_128_361G1_scaffold_260_23
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28685..29416
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MPP4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS69767.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
L3_128_361G1_scaffold_260_24
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29437..29724
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6PNU7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC11457.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
L3_128_361G1_scaffold_260_25
unknown

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29717..30703
DNA (987bp) protein (329aa)

This feature has no annotations

L3_128_361G1_scaffold_260_26
unknown

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30691..31431
DNA (741bp) protein (247aa)

This feature has no annotations

L3_128_361G1_scaffold_260_27
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31534..31881
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MFD4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS69774.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
L3_128_361G1_scaffold_260_28
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31931..32842
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MFJ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS69775.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
hypothetical protein
L3_128_361G1_scaffold_260_29
Enterococcus durans, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

32851..33222
DNA (372bp) protein (124aa)
Uncharacterized protein n=7 Tax=Lactobacillus casei group RepID=S2NXR1_LACPA
Uncharacterized protein {ECO:0000313|EMBL:EMS77011.1}; TaxID=1288492 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus durans IPLA 655.;"
hypothetical protein
L3_128_361G1_scaffold_260_30
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33310..35712
DNA (2403bp) protein (801aa)
Orf26 family protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6NSX0_9CLOT
Orf26 family protein {ECO:0000313|EMBL:CDC11474.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
TrsE protein
Displaying items 1-30 of 61 in total

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