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L3_128_361G1_scaffold_261

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_361G1_scaffold_261_1
unknown

Not on your lists

comp(3..62)
DNA (60bp) protein (20aa)

This feature has no annotations

L3_128_361G1_scaffold_261_2
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(390..1082)
DNA (693bp) protein (231aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6PS67_9FIRM
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:CDC27248.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_128_361G1_scaffold_261_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1270..1500)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H7H7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEU96120.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
L3_128_361G1_scaffold_261_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2134..5316
DNA (3183bp) protein (1061aa)
ABC transporter, ATP-binding protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3A5_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEU97584.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
ABC-type antimicrobial peptide transport system, ATPase component
L3_128_361G1_scaffold_261_5
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5594..6304)
DNA (711bp) protein (237aa)
Mg2+ transporter-C family protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D641_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KEZ90290.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
MgtC/SapB transporter
L3_128_361G1_scaffold_261_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6322..7074)
DNA (753bp) protein (251aa)
Adenine deaminase (EC:3.5.4.2)
Adenine deaminase {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067}; Short=Adenase {ECO:0000256|HAMAP-Rule:MF_01518};; Short=Adenine aminase {ECO:0000256|HAMAP-Rule:MF_01518};; EC=3.5.4.2 {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Adenine deaminase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K7X5_9FIRM
L3_128_361G1_scaffold_261_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7077..7829)
DNA (753bp) protein (251aa)
Adenine deaminase (EC:3.5.4.2)
Adenine deaminase {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067}; Short=Adenase {ECO:0000256|HAMAP-Rule:MF_01518};; Short=Adenine aminase {ECO:0000256|HAMAP-Rule:MF_01518};; EC=3.5.4.2 {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067};; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Adenine deaminase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K7X5_9FIRM
L3_128_361G1_scaffold_261_8
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7872..8981)
DNA (1110bp) protein (370aa)
Nucleoside 2-deoxyribosyltransferase n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2F0G4_CLOS4
Nucleoside 2-deoxyribosyltransferase {ECO:0000313|EMBL:ERI98741.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
nucleoside 2-deoxyribosyltransferase
L3_128_361G1_scaffold_261_9
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9004..9957)
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XEY1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY98232.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
inosine-uridine preferring nucleoside hydrolase
L3_128_361G1_scaffold_261_10
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10126..11133)
DNA (1008bp) protein (336aa)
Transcriptional regulator n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TCT4_9CLOT
Transcriptional regulator {ECO:0000313|EMBL:CCZ63443.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
LacI family transcription regulator
L3_128_361G1_scaffold_261_11
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11360..12136)
DNA (777bp) protein (259aa)
UbiC transcription regulator-associated domain protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AEM7_9CLOT
UbiC transcription regulator-associated domain protein {ECO:0000313|EMBL:EFC99737.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
transcriptional regulator
L3_128_361G1_scaffold_261_12
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12371..12784)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IJQ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE50807.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
hypothetical protein
L3_128_361G1_scaffold_261_13
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12797..13936)
DNA (1140bp) protein (380aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9K199_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS37262.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
glucosamine--fructose-6-phosphate aminotransferase
L3_128_361G1_scaffold_261_14
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13948..14826)
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IJQ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE50812.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
sugar phosphate isomerase/epimerase
L3_128_361G1_scaffold_261_15
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14849..15694)
DNA (846bp) protein (282aa)
ABC transporter n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7EMR6_CLOPA
ABC transporter permease {ECO:0000313|EMBL:KEZ89007.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
ugpE2; sn-glycerol-3-phosphate transport system permease protein UgpE
L3_128_361G1_scaffold_261_16
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15694..16593)
DNA (900bp) protein (300aa)
Glycerol-3-phosphate ABC-transporter permease component n=2 Tax=Clostridium RepID=R5TCP6_9CLOT
Glycerol-3-phosphate ABC-transporter permease component {ECO:0000313|EMBL:CCZ63420.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
ugpA2; sn-glycerol-3-phosphate transport system permease protein UgpA
L3_128_361G1_scaffold_261_17
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16597..17403)
DNA (807bp) protein (269aa)
HAD hydrolase, family IIB n=2 Tax=Clostridium RepID=D3AEM8_9CLOT
HAD hydrolase, family IIB {ECO:0000313|EMBL:EFC99738.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
HAD-superfamily hydrolase, subfamily IIB
L3_128_361G1_scaffold_261_18
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17519..18937)
DNA (1419bp) protein (473aa)
Putative glicerol-3-phosphate ABC-transporter periplasmic component n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TWT2_9CLOT
Putative glicerol-3-phosphate ABC-transporter periplasmic component {ECO:0000313|EMBL:CCZ63421.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
ugpB2; sn-glycerol-3-phosphate-binding periplasmic protein UgpB
L3_128_361G1_scaffold_261_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19268..20005)
DNA (738bp) protein (246aa)
Probable transcriptional regulatory protein FP2_05840 n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K3X0_9FIRM
conserved hypothetical protein TIGR01033
Probable transcriptional regulatory protein FP2_05840 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_128_361G1_scaffold_261_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20220..21707)
DNA (1488bp) protein (496aa)
tRNA and rRNA cytosine-C5-methylases n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K3W9_9FIRM
tRNA and rRNA cytosine-C5-methylases
tRNA and rRNA cytosine-C5-methylases {ECO:0000313|EMBL:CBK98212.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_128_361G1_scaffold_261_21
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21856..22032
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q137_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC30428.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
hypothetical protein
L3_128_361G1_scaffold_261_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22138..22542)
DNA (405bp) protein (135aa)
Mini-ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_01468}; Short=Mini-3 {ECO:0000256|HAMAP-Rule:MF_01468};; Short=Mini-RNase 3 {ECO:0000256|HAMAP-Rule:MF_01468};; EC=3.1.26.- {ECO:0000256|HAMAP-Rule:MF_01468};; Mini-RNase III {ECO:0000256|HAMAP-Rule:MF_01468}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Mini-ribonuclease 3 n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K3W7_9FIRM
hypothetical protein
L3_128_361G1_scaffold_261_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22559..23842)
DNA (1284bp) protein (428aa)
GTPase Obg n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K3W6_9FIRM
Obg family GTPase CgtA
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_128_361G1_scaffold_261_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(23920..24171)
DNA (252bp) protein (84aa)
50S ribosomal protein L27 n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K3W5_9FIRM
LSU ribosomal protein L27P
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_128_361G1_scaffold_261_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(24187..24498)
DNA (312bp) protein (104aa)
50S ribosomal protein L21 n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H7C1_9FIRM
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
LSU ribosomal protein L21P
L3_128_361G1_scaffold_261_26
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24666..25724)
DNA (1059bp) protein (353aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
prolipoprotein diacylglyceryl transferase (EC:2.4.99.-)
Prolipoprotein diacylglyceryl transferase n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SAQ1_9FIRM
L3_128_361G1_scaffold_261_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25721..27043)
DNA (1323bp) protein (441aa)
Peptidase M16 inactive domain protein {ECO:0000313|EMBL:EDP21613.1}; EC=3.4.24.- {ECO:0000313|EMBL:EDP21613.1};; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Peptidase M16 inactive domain protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SAQ0_9FIRM
Predicted Zn-dependent peptidases
L3_128_361G1_scaffold_261_28
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27036..28322)
DNA (1287bp) protein (429aa)
Peptidase M16 inactive domain protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6R8J2_9FIRM
Peptidase M16 inactive domain protein {ECO:0000313|EMBL:CDC30777.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
Predicted Zn-dependent peptidases
L3_128_361G1_scaffold_261_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28379..29224)
DNA (846bp) protein (282aa)
Tat pathway signal sequence domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H7C5_9FIRM
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EEU96195.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
D-alanyl-D-alanine carboxypeptidase
L3_128_361G1_scaffold_261_30
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29421..30620)
DNA (1200bp) protein (400aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
aspartate kinase, monofunctional class (EC:2.7.2.4)
Aspartokinase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZMT2_9FIRM
Displaying items 1-30 of 52 in total

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