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L3_128_361G1_scaffold_271

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Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_361G1_scaffold_271_1
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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233..1024
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RH14_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC48158.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
hypothetical protein
L3_128_361G1_scaffold_271_2
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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1041..2288
DNA (1248bp) protein (416aa)
Transporter, major facilitator family protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FMT9_9CLOT
Transporter, major facilitator family protein {ECO:0000313|EMBL:EEA82678.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_128_361G1_scaffold_271_3
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(2273..3151)
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RS32_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC48134.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
AraC-type DNA-binding domain-containing proteins
L3_128_361G1_scaffold_271_4
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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3332..4999
DNA (1668bp) protein (556aa)
Glycosidases (EC:3.2.1.10)
Oligo-1 6-glucosidase n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RGZ3_9FIRM
Oligo-1 6-glucosidase {ECO:0000313|EMBL:CDC48133.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L3_128_361G1_scaffold_271_5
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(5073..5495)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6SNG2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC48132.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L3_128_361G1_scaffold_271_6
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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5706..6914
DNA (1209bp) protein (403aa)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565}; EC=2.7.7.27 {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565};; ADP-glucose pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00624}; ADP-glucose synthase {ECO:0000256|HAMAP-Rule:MF_00624}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
glucose-1-phosphate adenylyltransferase (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RYI9_9FIRM
L3_128_361G1_scaffold_271_7
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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6908..8050
DNA (1143bp) protein (381aa)
glucose-1-phosphate adenylyltransferase, GlgD subunit (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase GlgD subunit n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RS10_9FIRM
Glucose-1-phosphate adenylyltransferase GlgD subunit {ECO:0000313|EMBL:CDC48109.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L3_128_361G1_scaffold_271_8
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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8250..9743
DNA (1494bp) protein (498aa)
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6SNE2_9FIRM
Inosine-5'-monophosphate dehydrogenase {ECO:0000313|EMBL:CDC48107.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
IMP dehydrogenase/GMP reductase
L3_128_361G1_scaffold_271_9
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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10139..10603
DNA (465bp) protein (155aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JI63_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN38505.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
Transcriptional regulators
L3_128_361G1_scaffold_271_10
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

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10600..11958
DNA (1359bp) protein (453aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:215 RepID=R6EVM9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB01199.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
putative efflux protein, MATE family
L3_128_361G1_scaffold_271_11
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12015..12524)
DNA (510bp) protein (170aa)
acetolactate synthase, small subunit (EC:2.2.1.6)
Acetolactate synthase small subunit n=1 Tax=Lachnospiraceae bacterium CAG:364 RepID=R6PL56_9FIRM
Acetolactate synthase small subunit {ECO:0000313|EMBL:CDC10482.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
L3_128_361G1_scaffold_271_12
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12537..14255)
DNA (1719bp) protein (573aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
acetolactate synthase, large subunit, biosynthetic type (EC:2.2.1.6)
Acetolactate synthase n=1 Tax=Lachnospiraceae bacterium CAG:364 RepID=R6NQ50_9FIRM
L3_128_361G1_scaffold_271_13
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

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14894..15400
DNA (507bp) protein (169aa)
TRAP transporter DctQ-like membrane protein n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6WFR4_9FIRM
TRAP transporter DctQ-like membrane protein {ECO:0000313|EMBL:CDC93017.1}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
TRAP-type C4-dicarboxylate transport system, small permease component
L3_128_361G1_scaffold_271_14
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

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15404..17743
DNA (2340bp) protein (780aa)
TRAP transporter DctM subunit/tripartite ATP-independent periplasmic transporter solute receptor DctP family n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6V7I3_9FIRM
TRAP transporter DctM subunit/tripartite ATP-independent periplasmic transporter solute receptor DctP family {ECO:0000313|EMBL:CDC93015.1}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
TRAP transporter, DctM subunit/tripartite ATP-independent periplasmic transporter solute receptor, DctP family
L3_128_361G1_scaffold_271_15
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

17879..18661
DNA (783bp) protein (261aa)
Uridine phosphorylase {ECO:0000256|RuleBase:RU361131}; EC=2.4.2.3 {ECO:0000256|RuleBase:RU361131};; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RR84_9FIRM
udp; uridine phosphorylase
L3_128_361G1_scaffold_271_16
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

18658..19083
DNA (426bp) protein (142aa)
cytidine deaminase (EC:3.5.4.5)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6SG17_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC45552.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L3_128_361G1_scaffold_271_17
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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19096..21228
DNA (2133bp) protein (711aa)
Type II secretory pathway, pullulanase PulA and related glycosidases (EC:3.2.1.-)
Putative glycogen debranching enzyme GlgX n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RR72_9FIRM
Putative glycogen debranching enzyme GlgX {ECO:0000313|EMBL:CDC45536.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L3_128_361G1_scaffold_271_18
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(21311..21919)
DNA (609bp) protein (203aa)
Cytidylate kinase (EC:2.7.4.14)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RJU8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC45544.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L3_128_361G1_scaffold_271_19
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

22214..23746
DNA (1533bp) protein (511aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6SG14_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC45547.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
cell envelope-related function transcriptional attenuator common domain
L3_128_361G1_scaffold_271_20
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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24111..25727
DNA (1617bp) protein (539aa)
Na+/H+ antiporter family protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R9I2_9FIRM
Na+/H+ antiporter family protein {ECO:0000313|EMBL:CDC45548.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
transporter, NhaC family (TC 2.A.35)
L3_128_361G1_scaffold_271_21
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(25803..26582)
DNA (780bp) protein (260aa)
RNA polymerase sigma factor n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RCJ3_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
RNA polymerase, sigma subunit, RpsG/SigG
L3_128_361G1_scaffold_271_22
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

26771..27955
DNA (1185bp) protein (395aa)
Phosphopentomutase {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00010015}; EC=5.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00009998};; Phosphodeoxyribomutase {ECO:0000256|HAMAP-Rule:MF_00740}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
phosphopentomutase (EC:5.4.2.7)
Phosphopentomutase n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R9I5_9FIRM
L3_128_361G1_scaffold_271_23
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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28838..29737
DNA (900bp) protein (300aa)
Ribokinase n=1 Tax=Dorea sp. 5-2 RepID=R9NCC3_9FIRM
Ribokinase {ECO:0000313|EMBL:EOS80940.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
ribokinase
L3_128_361G1_scaffold_271_24
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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29734..30141
DNA (408bp) protein (136aa)
D-ribose pyranase {ECO:0000256|HAMAP-Rule:MF_01661, ECO:0000256|SAAS:SAAS00011477}; EC=5.4.99.62 {ECO:0000256|HAMAP-Rule:MF_01661, ECO:0000256|SAAS:SAAS00166232};; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
D-ribose pyranase n=1 Tax=Dorea sp. 5-2 RepID=R9NDA5_9FIRM
Ribose ABC transport system, high affinity permease RbsD
L3_128_361G1_scaffold_271_25
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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30165..31652
DNA (1488bp) protein (496aa)
Ribose import ATP-binding protein RbsA {ECO:0000256|HAMAP-Rule:MF_01716}; EC=3.6.3.17 {ECO:0000256|HAMAP-Rule:MF_01716};; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6JRU7_9CLOT
monosaccharide-transporting ATPase
L3_128_361G1_scaffold_271_26
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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31649..32371
DNA (723bp) protein (241aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=A8RHZ1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP19110.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
ribose ABC transporter permease
L3_128_361G1_scaffold_271_27
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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32389..32550
DNA (162bp) protein (54aa)
ribose ABC transporter permease n=1 Tax=Dorea sp. 5-2 RepID=UPI0003B71AA4
Uncharacterized protein {ECO:0000313|EMBL:EOS80943.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
ABC transporter permease
L3_128_361G1_scaffold_271_28
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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32563..33429
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9NCB0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS80944.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
periplasmic binding protein/LacI transcriptional regulator
L3_128_361G1_scaffold_271_29

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comp(33850..34833)
DNA (984bp) protein (328aa)
Sugar-binding domain protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A7Z4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETJ17003.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
bacterial regulatory s, lacI family protein
L3_128_361G1_scaffold_271_30
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(34932..35726)
DNA (795bp) protein (265aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6REJ5_9FIRM
Displaying items 1-30 of 54 in total

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