ggKbase home page

L3_128_361G1_scaffold_354

Search features with annotation key words

Displaying items 1-30 of 76 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_361G1_scaffold_354_1
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

2..235
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HDF2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY22776.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
Subtilisin-like serine proteases
L3_128_361G1_scaffold_354_2
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

318..1721
DNA (1404bp) protein (468aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HD19_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY22777.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
pyruvate carboxyltransferase domain-containing protein
L3_128_361G1_scaffold_354_3
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

1718..2431
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GZX4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY22778.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
GntR family transcriptional regulator
L3_128_361G1_scaffold_354_4
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

2424..3629
DNA (1206bp) protein (402aa)
Isocitrate dehydrogenase [NADP] {ECO:0000256|PIRNR:PIRNR000108}; EC=1.1.1.42 {ECO:0000256|PIRNR:PIRNR000108};; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
isocitrate dehydrogenase, NADP-dependent, eukaryotic type (EC:1.1.1.42)
Isocitrate dehydrogenase [NADP] n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H402_9FIRM
L3_128_361G1_scaffold_354_5
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

3647..4069
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GZF0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY22780.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
hypothetical protein
L3_128_361G1_scaffold_354_6
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(4152..6107)
DNA (1956bp) protein (652aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HDF8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY22781.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
ATPase components of ABC transporters with duplicated ATPase domains
L3_128_361G1_scaffold_354_7
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

6310..6960
DNA (651bp) protein (217aa)
Redox-sensing transcriptional repressor Rex n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HD23_9FIRM
Redox-sensing transcriptional repressor Rex {ECO:0000256|HAMAP-Rule:MF_01131}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
CoA-binding domain-containing protein
L3_128_361G1_scaffold_354_8
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

7004..8566
DNA (1563bp) protein (521aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GZX9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY22783.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
carbohydrate kinase
L3_128_361G1_scaffold_354_9
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

8574..9773
DNA (1200bp) protein (400aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247};; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
alanine racemase (EC:5.1.1.1)
Alanine racemase n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H405_9FIRM
L3_128_361G1_scaffold_354_10
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

9866..10207
DNA (342bp) protein (114aa)
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
mRNA interferase n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GZF5_9FIRM
Growth inhibitor
L3_128_361G1_scaffold_354_11
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

10289..11020
DNA (732bp) protein (244aa)
Probable transcriptional regulatory protein BN555_02468 n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HDG3_9FIRM
Probable transcriptional regulatory protein BN555_02468 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
conserved hypothetical protein TIGR01033
L3_128_361G1_scaffold_354_12
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

11057..12322
DNA (1266bp) protein (422aa)
O-acetylhomoserine sulfhydrolase (EC:2.5.1.49)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HD28_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY22787.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
L3_128_361G1_scaffold_354_13
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

12379..13791
DNA (1413bp) protein (471aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GZY4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY22788.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
L3_128_361G1_scaffold_354_14
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

13850..14578
DNA (729bp) protein (243aa)
Clp protease n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H410_9FIRM
Clp protease {ECO:0000313|EMBL:CCY22789.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
peptidase S14 ClpP
L3_128_361G1_scaffold_354_15
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

14662..17631
DNA (2970bp) protein (990aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GZG0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY22790.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
DNA translocase FtsK
L3_128_361G1_scaffold_354_16
Firmicutes bacterium CAG:534, Firmicutes, Bacteria

Not on your lists

17647..19317
DNA (1671bp) protein (557aa)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=1263027 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:534.;"
Formate--tetrahydrofolate ligase n=1 Tax=Firmicutes bacterium CAG:534 RepID=R7AUK7_9FIRM
formate--tetrahydrofolate ligase
L3_128_361G1_scaffold_354_17
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

19425..20270
DNA (846bp) protein (282aa)
5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase (EC:3.5.4.9)
Bifunctional protein FolD n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HD33_9FIRM
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
L3_128_361G1_scaffold_354_18
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

20267..21691
DNA (1425bp) protein (475aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GZZ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY22793.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
TPR domain-containing protein
L3_128_361G1_scaffold_354_19
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

21759..22649
DNA (891bp) protein (297aa)
sulfide dehydrogenase (flavoprotein) subunit SudB (EC:1.18.1.2 1.97.-.-)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H416_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY22794.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
L3_128_361G1_scaffold_354_20
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

22649..24037
DNA (1389bp) protein (463aa)
sulfide dehydrogenase (flavoprotein) subunit SudA (EC:1.4.1.13 1.4.1.14 1.97.-.-)
Sulfide dehydrogenase (Flavoprotein) subunit SudA n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GZG6_9FIRM
Sulfide dehydrogenase (Flavoprotein) subunit SudA {ECO:0000313|EMBL:CCY22795.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
L3_128_361G1_scaffold_354_21
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24051..24383
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KA70_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN40529.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L3_128_361G1_scaffold_354_22
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

24364..24645
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HDH2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY22796.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
L3_128_361G1_scaffold_354_23
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

24642..25121
DNA (480bp) protein (160aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039794}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039776};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HD37_9FIRM
rRNA large subunit methyltransferase
L3_128_361G1_scaffold_354_24
Lachnospiraceae bacterium 10-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25146..25454
DNA (309bp) protein (103aa)
Sporulation protein YqfC n=1 Tax=Lachnospiraceae bacterium 10-1 RepID=R9N5C8_9FIRM
Sporulation protein YqfC {ECO:0000313|EMBL:EOS78514.1}; TaxID=1235800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 10-1.;"
YabP family.
L3_128_361G1_scaffold_354_25
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

25420..26709
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H421_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY22799.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
Putative stage IV sporulation protein YqfD.
L3_128_361G1_scaffold_354_26
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

26721..27809
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GZH2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY22800.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
phosphate starvation-inducible protein PhoH, putative ATPase
L3_128_361G1_scaffold_354_27
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

27809..28321
DNA (513bp) protein (171aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009};; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
Endoribonuclease YbeY n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HDH7_9FIRM
hypothetical protein
L3_128_361G1_scaffold_354_28
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

28335..29966
DNA (1632bp) protein (544aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HD41_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY22802.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
membrane protein
L3_128_361G1_scaffold_354_29
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

30064..30711
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GZZ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY22803.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
L3_128_361G1_scaffold_354_30
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30750..32039
DNA (1290bp) protein (430aa)
HI0933 family flavoprotein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KAR5_9FIRM
HI0933 family flavoprotein {ECO:0000313|EMBL:EGN40500.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
Displaying items 1-30 of 76 in total

View Taxonomy