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L3_128_361G1_scaffold_361

Search features with annotation key words

Displaying items 1-30 of 72 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_361G1_scaffold_361_1
Clostridium sp. CAG:508, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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323..808
DNA (486bp) protein (162aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=1262815 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:508.;"
ruvC; crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Clostridium sp. CAG:508 RepID=R6QKT9_9CLOT
L3_128_361G1_scaffold_361_2
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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847..1872
DNA (1026bp) protein (342aa)
DNA polymerase III subunit delta (EC:2.7.7.7)
DNA polymerase III delta subunit n=1 Tax=Clostridium sp. CAG:343 RepID=R6N0G9_9CLOT
DNA polymerase III delta subunit {ECO:0000313|EMBL:CDC05473.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
L3_128_361G1_scaffold_361_3
unknown

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2010..3116
DNA (1107bp) protein (369aa)

This feature has no annotations

L3_128_361G1_scaffold_361_4
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3183..3869
DNA (687bp) protein (229aa)
Spore cortex-lytic enzyme n=1 Tax=Clostridium sp. CAG:354 RepID=R7F4B9_9CLOT
Spore cortex-lytic enzyme {ECO:0000313|EMBL:CDE10104.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
sleB3; spore cortex-lytic enzyme SleB
L3_128_361G1_scaffold_361_5
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4366..6414
DNA (2049bp) protein (683aa)
ATP-dependent DNA helicase RecG (EC:3.6.1.-)
ATP-dependent DNA helicase RecG n=1 Tax=Clostridium sp. CAG:343 RepID=R6P7T8_9CLOT
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:CDC05962.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
L3_128_361G1_scaffold_361_6
Clostridium sp. CAG:575, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6561..6887
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:575 RepID=R6HDM8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB31626.1}; TaxID=1262823 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:575.;"
L3_128_361G1_scaffold_361_7
Clostridium sp. CAG:571, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7397..8362)
DNA (966bp) protein (322aa)
Integrase family protein n=1 Tax=Clostridium sp. CAG:571 RepID=R5XPH3_9CLOT
Integrase family protein {ECO:0000313|EMBL:CDA17188.1}; TaxID=1262822 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:571.;"
integrase
L3_128_361G1_scaffold_361_8
unknown

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comp(8472..8642)
DNA (171bp) protein (57aa)

This feature has no annotations

L3_128_361G1_scaffold_361_9
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8706..9776)
DNA (1071bp) protein (357aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C925_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34898.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_128_361G1_scaffold_361_10
Clostridium sp. CAG:452, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9766..10128)
DNA (363bp) protein (121aa)
SOS-response transcriptional repressor LexA n=1 Tax=Clostridium sp. CAG:452 RepID=R6YG47_9CLOT
SOS-response transcriptional repressor LexA {ECO:0000313|EMBL:CDD27516.1}; TaxID=1262810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:452.;"
bacteriophage transcriptional regulator
L3_128_361G1_scaffold_361_11
Clostridium sp. CAG:452, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10262..10480
DNA (219bp) protein (73aa)
Toxin-antitoxin system antitoxin component Xre family n=1 Tax=Clostridium sp. CAG:452 RepID=R6ZAQ2_9CLOT
Toxin-antitoxin system antitoxin component Xre family {ECO:0000313|EMBL:CDD27517.1}; TaxID=1262810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:452.;"
XRE family transcriptional regulator
L3_128_361G1_scaffold_361_12
Aneurinibacillus migulanus, Aneurinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10497..11297
DNA (801bp) protein (267aa)
hypothetical protein n=1 Tax=Gracilibacillus lacisalsi RepID=UPI00037B8AF7
Strain NCTC 7096 contig_405, whole genome shotgun sequence {ECO:0000313|EMBL:KIV49814.1}; TaxID=47500 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Aneurinibacillus group; Aneurinibacillus.;" source="Aneurinibacillus migulanus (Bacillus migulanus).;"
prophage antirepressor
L3_128_361G1_scaffold_361_13
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

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11299..11496
DNA (198bp) protein (66aa)
Uncharacterized protein n=2 Tax=Clostridiales Family XI. Incertae Sedis RepID=D6S6U5_FINMA
Uncharacterized protein {ECO:0000313|EMBL:EFH93799.1}; TaxID=525282 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna ATCC 53516.;"
hypothetical protein
L3_128_361G1_scaffold_361_14
unknown

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11497..11763
DNA (267bp) protein (89aa)

This feature has no annotations

L3_128_361G1_scaffold_361_15
unknown

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11763..11906
DNA (144bp) protein (48aa)

This feature has no annotations

L3_128_361G1_scaffold_361_16
unknown

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11910..12110
DNA (201bp) protein (67aa)

This feature has no annotations

L3_128_361G1_scaffold_361_17
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12089..12370
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:343 RepID=R6N289_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC06108.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
L3_128_361G1_scaffold_361_18
Clostridium sp. CAG:470, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12434..12598
DNA (165bp) protein (55aa)
MazG family protein n=1 Tax=Clostridium sp. CAG:470 RepID=R7FI06_9CLOT
MazG family protein {ECO:0000313|EMBL:CDE14138.1}; TaxID=1262812 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:470.;"
hypothetical protein
L3_128_361G1_scaffold_361_19
unknown

Not on your lists

12601..12702
DNA (102bp) protein (34aa)

This feature has no annotations

L3_128_361G1_scaffold_361_20
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12662..13189
DNA (528bp) protein (176aa)
Siphovirus Gp157 family protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VGI6_CLOBI
Bacteriophage resistance protein,Siphovirus Gp157 {ECO:0000313|EMBL:CEK35429.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
conserved hypothetical protein
L3_128_361G1_scaffold_361_21

Not on your lists

13253..13966
DNA (714bp) protein (238aa)
Marine sediment metagenome DNA, contig: S01H4_S09733 {ECO:0000313|EMBL:GAG93830.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
L3_128_361G1_scaffold_361_22
unknown

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13976..14440
DNA (465bp) protein (155aa)

This feature has no annotations

L3_128_361G1_scaffold_361_23
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14437..14814
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:343 RepID=R6NKI2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC06741.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
L3_128_361G1_scaffold_361_24
Peptostreptococcaceae bacterium CM5, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14877..15443
DNA (567bp) protein (189aa)
Putative uncharacterized protein n=1 Tax=Eubacteriaceae bacterium CM5 RepID=G9XBV9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL19446.1}; TaxID=796940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium CM5.;"
hypothetical protein
L3_128_361G1_scaffold_361_25
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15458..15757
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:269 RepID=R7IWH4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE54977.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
L3_128_361G1_scaffold_361_26
Clostridium sp. CAG:470, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15902..16270
DNA (369bp) protein (123aa)
Gp63 n=1 Tax=Clostridium sp. CAG:470 RepID=R7FGZ0_9CLOT
Gp63 {ECO:0000313|EMBL:CDE14125.1}; TaxID=1262812 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:470.;"
prophage P2a protein 24; endodeoxyribonuclease RusA-like
L3_128_361G1_scaffold_361_27
unknown

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16257..16472
DNA (216bp) protein (72aa)

This feature has no annotations

L3_128_361G1_scaffold_361_28
unknown

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16477..16983
DNA (507bp) protein (169aa)

This feature has no annotations

L3_128_361G1_scaffold_361_29
unknown

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17021..17299
DNA (279bp) protein (93aa)

This feature has no annotations

L3_128_361G1_scaffold_361_30
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17302..17970
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:354 RepID=R7F9B4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE11088.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
hypothetical protein
Displaying items 1-30 of 72 in total

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