ggKbase home page

L3_128_361G1_scaffold_388

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_361G1_scaffold_388_1
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(109..549)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D20 RepID=D2EXN3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFA20419.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
hypothetical protein
L3_128_361G1_scaffold_388_2
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

796..1704
DNA (909bp) protein (303aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=D2EXN5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFA20420.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
hypothetical protein
L3_128_361G1_scaffold_388_3
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1770..2528
DNA (759bp) protein (253aa)
LytTr DNA-binding domain protein n=6 Tax=Bacteroides RepID=D2EXN6_9BACE
Response regulator {ECO:0000313|EMBL:KDS47951.1}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
two component transcriptional regulator, LytTR family
L3_128_361G1_scaffold_388_4
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2539..3558
DNA (1020bp) protein (340aa)
Histidine kinase n=1 Tax=Bacteroides sp. D20 RepID=D2EXN7_9BACE
Histidine kinase {ECO:0000313|EMBL:EFA20423.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
signal transduction histidine kinase, LytS
L3_128_361G1_scaffold_388_5
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3545..4552)
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9IBF2_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EOS10670.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
hypothetical protein
L3_128_361G1_scaffold_388_6
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4646..6709
DNA (2064bp) protein (688aa)
CoA binding domain-containing protein n=5 Tax=Bacteroides RepID=E5V769_9BACE
CoA binding domain-containing protein {ECO:0000313|EMBL:EFV27251.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
CoA-binding domain protein
L3_128_361G1_scaffold_388_7
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6843..10871
DNA (4029bp) protein (1343aa)
Response regulator receiver domain-containing protein n=1 Tax=Bacteroides sp. 4_1_36 RepID=E5V770_9BACE
Response regulator receiver domain-containing protein {ECO:0000313|EMBL:EFV27252.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
two-component system sensor histidine kinase/response regulator
L3_128_361G1_scaffold_388_8
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10937..13489
DNA (2553bp) protein (851aa)
Glycosyl hydrolase family 38 N-terminal domain protein n=1 Tax=Bacteroides uniformis ATCC 8492 RepID=A7V900_BACUN
Glycosyl hydrolase family 38 N-terminal domain protein {ECO:0000313|EMBL:EDO52456.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
glycoside hydrolase family 38
L3_128_361G1_scaffold_388_9
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13571..15661
DNA (2091bp) protein (697aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=A7V8Z9_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EDO52455.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
hypothetical protein
L3_128_361G1_scaffold_388_10
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15816..16820
DNA (1005bp) protein (335aa)
Sugar transport protein n=2 Tax=Bacteroides RepID=A7V8Z8_BACUN
Sugar transport protein {ECO:0000313|EMBL:EDO52454.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
multidrug DMT transporter permease
L3_128_361G1_scaffold_388_11
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16848..17777
DNA (930bp) protein (310aa)
Ribokinase n=2 Tax=Bacteroides RepID=A7V8Z7_BACUN
Ribokinase {ECO:0000313|EMBL:EFV27256.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
ribokinase
L3_128_361G1_scaffold_388_12
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17814..19358
DNA (1545bp) protein (515aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=A7V8Z6_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EDO52452.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
large exoprotein involved in heme utilization or adhesion
L3_128_361G1_scaffold_388_13
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19520..22657
DNA (3138bp) protein (1046aa)
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Bacteroides uniformis ATCC 8492 RepID=A7V8Z5_BACUN
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EDO52451.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
hypothetical protein
L3_128_361G1_scaffold_388_14
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22686..24476
DNA (1791bp) protein (597aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 4_1_36 RepID=E5V777_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFV27259.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
RagB/SusD domain-containing protein
L3_128_361G1_scaffold_388_15
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24553..26868
DNA (2316bp) protein (772aa)
Glycosyl hydrolase family 92 n=1 Tax=Bacteroides sp. 4_1_36 RepID=E5V778_9BACE
Glycosyl hydrolase family 92 {ECO:0000313|EMBL:EFV27260.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
alpha-1,2-mannosidase
L3_128_361G1_scaffold_388_16
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26932..28101
DNA (1170bp) protein (390aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=A7V8Z2_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EFV27261.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
hypothetical protein
L3_128_361G1_scaffold_388_17
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28155..30839
DNA (2685bp) protein (895aa)
Alpha amylase, catalytic domain protein n=2 Tax=Bacteroides RepID=A7V8Z1_BACUN
F5/8 type C domain-containing protein {ECO:0000313|EMBL:EFV27262.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
glycoside hydrolase family protein
L3_128_361G1_scaffold_388_18
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30966..32504)
DNA (1539bp) protein (513aa)
Mg chelatase-like protein n=3 Tax=Bacteroides RepID=A7V8Z0_BACUN
Magnesium chelatase {ECO:0000313|EMBL:EFV27263.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
Sigma 54 interacting domain protein
L3_128_361G1_scaffold_388_19
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32542..33615)
DNA (1074bp) protein (358aa)
Antioxidant, AhpC/TSA family {ECO:0000313|EMBL:EFA20427.1}; EC=1.11.1.15 {ECO:0000313|EMBL:EFA20427.1};; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
Antioxidant, AhpC/TSA family n=3 Tax=Bacteroides RepID=A7V8Y9_BACUN
alkyl hydroperoxide reductase
L3_128_361G1_scaffold_388_20
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33727..35421)
DNA (1695bp) protein (565aa)
Tetratricopeptide repeat protein n=3 Tax=Bacteroides RepID=A7V8Y8_BACUN
Tetratricopeptide {ECO:0000313|EMBL:EFV27265.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
hypothetical protein
L3_128_361G1_scaffold_388_21
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35558..36511)
DNA (954bp) protein (318aa)
Tyrosine recombinase XerC n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9IBF7_BACUN
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
tyrosine recombinase XerD subunit
L3_128_361G1_scaffold_388_22
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36630..37049
DNA (420bp) protein (140aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase n=5 Tax=Bacteroides RepID=D2EXP4_9BACE
L3_128_361G1_scaffold_388_23
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37070..38527
DNA (1458bp) protein (486aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase n=3 Tax=Bacteroides RepID=I8ZLD6_BACUN
L3_128_361G1_scaffold_388_24
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38646..39275
DNA (630bp) protein (210aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=I9U107_BACUN
Methyltransferase domain protein {ECO:0000313|EMBL:KDS47919.1}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
O-methyltransferase 3
L3_128_361G1_scaffold_388_25
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39285..40520)
DNA (1236bp) protein (412aa)
Efflux ABC transporter, permease protein n=4 Tax=Bacteroides RepID=A7V8Y3_BACUN
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EFA20433.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
hypothetical protein
L3_128_361G1_scaffold_388_26
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40520..40852)
DNA (333bp) protein (111aa)
Ribosome-binding factor A n=6 Tax=Bacteroides RepID=A7V8Y2_BACUN
Ribosome-binding factor A {ECO:0000313|EMBL:EDO52438.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
ribosome-binding factor A
L3_128_361G1_scaffold_388_27
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(41547..44057)
DNA (2511bp) protein (837aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis ATCC 8492 RepID=A7V8X9_BACUN
Bacterial membrane YfhO family protein {ECO:0000313|EMBL:KDS47915.1}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
hypothetical protein
L3_128_361G1_scaffold_388_28
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

44302..45006
DNA (705bp) protein (235aa)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 {ECO:0000256|SAAS:SAAS00035231}; EC=3.2.2.9 {ECO:0000256|SAAS:SAAS00035196};; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000256|SAAS:SAAS00035261}; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 {ECO:0000256|SAAS:SAAS00035188}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
methylthioadenosine nucleosidase (EC:3.2.2.16)
MTA/SAH nucleosidase n=5 Tax=root RepID=A7V8X7_BACUN
L3_128_361G1_scaffold_388_29
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

45031..45522
DNA (492bp) protein (164aa)
S-ribosylhomocysteine lyase {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059609}; EC=4.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059628};; AI-2 synthesis protein {ECO:0000256|HAMAP-Rule:MF_00091}; Autoinducer-2 production protein LuxS {ECO:0000256|HAMAP-Rule:MF_00091}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
quorum-sensing autoinducer 2 (AI-2), LuxS (EC:4.4.1.21)
S-ribosylhomocysteine lyase n=3 Tax=Bacteroides RepID=E5V792_9BACE
L3_128_361G1_scaffold_388_30
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(45619..47313)
DNA (1695bp) protein (565aa)
Uncharacterized protein n=4 Tax=root RepID=I8ZJT2_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY75765.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
AMP-dependent synthetase/ligase
Displaying items 1-30 of 45 in total

View Taxonomy