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L3_128_361G1_scaffold_2061

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_361G1_scaffold_2061_1
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..615)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BY14_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO35375.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_128_361G1_scaffold_2061_2
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(639..1394)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 PF0_9FIRM">RepID=G9YPF0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM52726.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L3_128_361G1_scaffold_2061_3
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1387..2310)
DNA (924bp) protein (308aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C7Q4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55842.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
bcrA; bacitracin ABC transporter ATP-binding protein
L3_128_361G1_scaffold_2061_4
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2414..3109)
DNA (696bp) protein (232aa)
Putative transcriptional regulatory protein ResD n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YPE8_9FIRM
Putative transcriptional regulatory protein ResD {ECO:0000313|EMBL:EHM52724.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
two component transcriptional regulator
L3_128_361G1_scaffold_2061_5
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3125..4852)
DNA (1728bp) protein (576aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C7Q6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55844.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
fibronectin-binding protein
L3_128_361G1_scaffold_2061_6
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4856..5089)
DNA (234bp) protein (78aa)
Mini-ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_01468}; Short=Mini-3 {ECO:0000256|HAMAP-Rule:MF_01468};; Short=Mini-RNase 3 {ECO:0000256|HAMAP-Rule:MF_01468};; EC=3.1.26.- {ECO:0000256|HAMAP-Rule:MF_01468};; Mini-RNase III {ECO:0000256|HAMAP-Rule:MF_01468}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Mini-ribonuclease 3 n=3 Tax=Clostridiales RepID=U2DC81_9CLOT
hypothetical protein
L3_128_361G1_scaffold_2061_7
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5105..5254)
DNA (150bp) protein (50aa)
Mini-ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_01468}; Short=Mini-3 {ECO:0000256|HAMAP-Rule:MF_01468};; Short=Mini-RNase 3 {ECO:0000256|HAMAP-Rule:MF_01468};; EC=3.1.26.- {ECO:0000256|HAMAP-Rule:MF_01468};; Mini-RNase III {ECO:0000256|HAMAP-Rule:MF_01468}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
Mini-ribonuclease 3 n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P055_9FIRM
hypothetical protein
L3_128_361G1_scaffold_2061_8
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5267..6496)
DNA (1230bp) protein (410aa)
putative RNA methyltransferase (EC:2.1.1.-)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LBK7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS55746.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
L3_128_361G1_scaffold_2061_9
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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6642..7265
DNA (624bp) protein (208aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
manganese/iron superoxide dismutase (EC:1.15.1.1)
Superoxide dismutase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C7Q8_9FIRM
L3_128_361G1_scaffold_2061_10
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7307..8155)
DNA (849bp) protein (283aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CBK6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55419.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_128_361G1_scaffold_2061_11
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8393..9262)
DNA (870bp) protein (290aa)
HPr kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058411}; Short=HPrK/P {ECO:0000256|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058427};; EC=2.7.4.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058435};; HPr(Ser) kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
HPr kinase/phosphorylase n=3 Tax=Clostridiales RepID=G9YX56_9FIRM
HPr kinase
L3_128_361G1_scaffold_2061_12
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


9468..9656
DNA (189bp) protein (63aa)
50S ribosomal protein L28 n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HPA7_9FIRM
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
rpmB; 50S ribosomal protein L28
L3_128_361G1_scaffold_2061_13
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9781..10581)
DNA (801bp) protein (267aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2AAW7_9CLOT
L3_128_361G1_scaffold_2061_14
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10863..12056
DNA (1194bp) protein (398aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CA19_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF54333.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_128_361G1_scaffold_2061_15
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12112..12732)
DNA (621bp) protein (207aa)
NADPH-dependent FMN reductase domain protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5T007_9CLOT
NADPH-dependent FMN reductase domain protein {ECO:0000313|EMBL:CCZ58873.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
Multimeric flavodoxin WrbA family protein
L3_128_361G1_scaffold_2061_16
unknown

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12902..13057
DNA (156bp) protein (52aa)

This feature has no annotations

Displaying 16 items

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