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L3_128_361G1_scaffold_1391

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_361G1_scaffold_1391_1
unknown

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comp(1..72)
DNA (72bp) protein (24aa)

This feature has no annotations

L3_128_361G1_scaffold_1391_2
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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150..1457
DNA (1308bp) protein (436aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00005}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
argG; argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAX5_9FIRM
L3_128_361G1_scaffold_1391_3
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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1675..3060
DNA (1386bp) protein (462aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211017};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_00006}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
argH; argininosuccinate lyase (EC:4.3.2.1)
Argininosuccinate lyase n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P0Q3_9FIRM
L3_128_361G1_scaffold_1391_4
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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3157..4098
DNA (942bp) protein (314aa)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_01110}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_01110};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_01110};; N-acetyl-glutamate semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01110}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BLM6_9CLOT
hypothetical protein
L3_128_361G1_scaffold_1391_5
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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4165..5388
DNA (1224bp) protein (408aa)
argJ; glutamate N-acetyltransferase/amino-acid acetyltransferase (EC:2.3.1.1 2.3.1.35)
Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YMG0_9FIRM
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000256|HAMAP-Rule:MF_01106}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L3_128_361G1_scaffold_1391_6
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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5409..6263
DNA (855bp) protein (285aa)
Acetylglutamate kinase {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245375}; EC=2.7.2.8 {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245383};; N-acetyl-L-glutamate 5-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00082}; NAG kinase {ECO:0000256|HAMAP-Rule:MF_00082}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
argB; acetylglutamate kinase (EC:2.7.2.8)
Acetylglutamate kinase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YMF9_9FIRM
L3_128_361G1_scaffold_1391_7
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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6277..7455
DNA (1179bp) protein (393aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
argD; acetylornithine/succinyldiaminopimelate aminotransferase (EC:2.6.1.11 2.6.1.17)
Acetylornithine aminotransferase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CGD3_9FIRM
L3_128_361G1_scaffold_1391_8
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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7503..8423
DNA (921bp) protein (307aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CGD4_9FIRM
L3_128_361G1_scaffold_1391_9
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8497..9987)
DNA (1491bp) protein (497aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamate--tRNA ligase n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P0L5_9FIRM
L3_128_361G1_scaffold_1391_10
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10124..10396)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6D2E2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA79259.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
hypothetical protein
L3_128_361G1_scaffold_1391_11
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10445..12085)
DNA (1641bp) protein (547aa)
Hydroxylamine reductase {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00038686}; EC=1.7.99.1 {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00150119};; Hybrid-cluster protein {ECO:0000256|HAMAP-Rule:MF_00069}; Prismane protein {ECO:0000256|HAMAP-Rule:MF_00069}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Hydroxylamine reductase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XA22_9FIRM
hypothetical protein
L3_128_361G1_scaffold_1391_12
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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12325..12855
DNA (531bp) protein (177aa)
Fructose-1,6-bisphosphatase class 3 {ECO:0000256|HAMAP-Rule:MF_01854}; Short=FBPase class 3 {ECO:0000256|HAMAP-Rule:MF_01854};; EC=3.1.3.11 {ECO:0000256|HAMAP-Rule:MF_01854};; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 3 {ECO:0000256|HAMAP-Rule:MF_01854}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
fbp; fructose-1,6-bisphosphatase class 3 1 (EC:3.1.3.11)
Fructose-1,6-bisphosphatase class 3 n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CKD9_9FIRM
Displaying 12 items

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