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L3_128_361G1_scaffold_32

Search features with annotation key words

Displaying items 1-30 of 147 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_361G1_scaffold_32_1
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(202..432)
DNA (231bp) protein (77aa)
Preprotein translocase, SecG subunit n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NW08_9FIRM
Preprotein translocase, SecG subunit {ECO:0000313|EMBL:EDM99665.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
secG; preprotein translocase SecG subunit
L3_128_361G1_scaffold_32_2
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(567..2600)
DNA (2034bp) protein (678aa)
Efflux ABC transporter, permease protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NW09_9FIRM
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EDM99666.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
ABC transporter
L3_128_361G1_scaffold_32_3
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2590..3357)
DNA (768bp) protein (256aa)
sulfate-transporting ATPase (EC:3.6.3.25)
ABC transporter, ATP-binding protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NW10_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDM99667.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
L3_128_361G1_scaffold_32_4
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3462..3956)
DNA (495bp) protein (165aa)
PAP2 family protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P2U9_9FIRM
PAP2 family protein {ECO:0000313|EMBL:EDM97370.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
phosphatidylglycerophosphatase B
L3_128_361G1_scaffold_32_5
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4127..4687
DNA (561bp) protein (187aa)
4'-phosphopantetheinyl transferase sfp domain protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YQW4_9FIRM
4'-phosphopantetheinyl transferase sfp domain protein {ECO:0000313|EMBL:EHM50678.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
4'-phosphopantetheinyl transferase
L3_128_361G1_scaffold_32_6
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4684..6738
DNA (2055bp) protein (685aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
rnr; Ribonuclease R (EC:3.1.13.1)
Ribonuclease R n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YQQ7_9FIRM
L3_128_361G1_scaffold_32_7
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6918..7985
DNA (1068bp) protein (356aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
Glycosyl hydrolase family 3 protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YQQ8_9FIRM
beta-glucosidase-like glycosyl hydrolase
L3_128_361G1_scaffold_32_8
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8109..9503)
DNA (1395bp) protein (465aa)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
asnS; asparaginyl-tRNA synthetase (EC:6.1.1.22)
Asparagine--tRNA ligase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XE38_9FIRM
L3_128_361G1_scaffold_32_9
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9600..10451)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NPV9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDN01884.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
L3_128_361G1_scaffold_32_10
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10468..10911)
DNA (444bp) protein (148aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CEK3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56762.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
response regulator
L3_128_361G1_scaffold_32_11
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11204..12595
DNA (1392bp) protein (464aa)
Putative permease n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZ13_RUMGN
Putative permease {ECO:0000313|EMBL:EDN79018.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
uracil-xanthine permease
L3_128_361G1_scaffold_32_12
Paenibacillus barengoltzii, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12714..14240)
DNA (1527bp) protein (509aa)
Simple sugar transport system ATP-binding protein n=1 Tax=Paenibacillus barengoltzii G22 RepID=R9LAK8_9BACL
Simple sugar transport system ATP-binding protein {ECO:0000313|EMBL:EOS55406.1}; TaxID=1235795 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus barengoltzii G22.;"
ABC transporter
L3_128_361G1_scaffold_32_13
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14241..15215)
DNA (975bp) protein (325aa)
Inner-membrane translocator n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8CWG7_HALOH
inner-membrane translocator
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EFD00126.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
L3_128_361G1_scaffold_32_14
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15218..16303)
DNA (1086bp) protein (362aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Clostridium sp. MSTE9 RepID=J1H4P6_9CLOT
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EJF40188.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
ABC-type uncharacterized transport system, permease component
L3_128_361G1_scaffold_32_15
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(16436..17467)
DNA (1032bp) protein (344aa)
Basic membrane lipoprotein n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R8M1_SPISS
basic membrane lipoprotein
Basic membrane lipoprotein {ECO:0000313|EMBL:ADK81778.1}; Flags: Precursor;; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
L3_128_361G1_scaffold_32_16
unknown

Not on your lists

comp(17708..18400)
DNA (693bp) protein (231aa)

This feature has no annotations

L3_128_361G1_scaffold_32_17
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(18403..19377)
DNA (975bp) protein (325aa)
methenyltetrahydromethanopterin cyclohydrolase (EC:3.5.4.27)
Methenyltetrahydromethanopterin cyclohydrolase {ECO:0000313|EMBL:ADK81949.1}; EC=3.5.4.27 {ECO:0000313|EMBL:ADK81949.1};; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
Methenyltetrahydromethanopterin cyclohydrolase n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R264_SPISS
L3_128_361G1_scaffold_32_18
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(19463..20497)
DNA (1035bp) protein (345aa)
Alcohol dehydrogenase GroES domain protein n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R8T5_SPISS
alcohol dehydrogenase GroES domain-containing protein
Alcohol dehydrogenase GroES domain protein {ECO:0000313|EMBL:ADK81842.1}; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
L3_128_361G1_scaffold_32_19
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20494..21501)
DNA (1008bp) protein (336aa)
hypothetical protein n=1 Tax=Spirochaeta bajacaliforniensis RepID=UPI000366BB86
Genome assembly strain_NMP_1 {ECO:0000313|EMBL:CEP66500.1}; TaxID=55779 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="Moorella glycerini.;"
sorbitol dehydrogenase
L3_128_361G1_scaffold_32_20
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(21519..22544)
DNA (1026bp) protein (342aa)
Alcohol dehydrogenase GroES domain protein n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R8T5_SPISS
alcohol dehydrogenase GroES domain-containing protein
Alcohol dehydrogenase GroES domain protein {ECO:0000313|EMBL:ADK81842.1}; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
L3_128_361G1_scaffold_32_21
Methanoregula boonei, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(22559..23218)
DNA (660bp) protein (220aa)
NADPH-dependent FMN reductase n=1 Tax=Methanoregula boonei (strain 6A8) RepID=A7I4D9_METB6
NADPH-dependent FMN reductase
NADPH-dependent FMN reductase {ECO:0000313|EMBL:ABS54600.1}; TaxID=456442 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula boonei (strain 6A8).;"
L3_128_361G1_scaffold_32_22
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(23239..24702)
DNA (1464bp) protein (488aa)
Carbohydrate kinase FGGY n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CH75_THET1
carbohydrate kinase FGGY
Carbohydrate kinase FGGY {ECO:0000313|EMBL:ACZ43096.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
L3_128_361G1_scaffold_32_23
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(24794..25591)
DNA (798bp) protein (266aa)
Deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R8T6_SPISS
deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase
Deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000313|EMBL:ADK81843.1}; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
L3_128_361G1_scaffold_32_24
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26030..27043)
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5F6I8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX99179.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
LacI family transcriptional regulator
L3_128_361G1_scaffold_32_25
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27092..28063)
DNA (972bp) protein (324aa)
trans-1,2-dihydrobenzene-1,2-diol dehydrogenase (EC:1.3.1.20)
Oxidoreductase, NAD-binding domain protein n=2 Tax=Coprococcus RepID=C0BC82_9FIRM
Oxidoreductase NAD-binding domain protein {ECO:0000313|EMBL:CDB85219.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
L3_128_361G1_scaffold_32_26
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28244..28612)
DNA (369bp) protein (123aa)
Putative endoribonuclease L-PSP n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YQQ3_9FIRM
Putative endoribonuclease L-PSP {ECO:0000313|EMBL:EHM50931.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
endoribonuclease L-PSP
L3_128_361G1_scaffold_32_27
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28892..29209
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Eubacterium eligens CAG:72 RepID=R5ZRP8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA41545.1}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
hypothetical protein
L3_128_361G1_scaffold_32_28
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29206..30300
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Blautia hydrogenotrophica CAG:147 RepID=R5BVN3_9FIRM
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Tax=RBG_16_Deltaproteobacteria_48_10_curated
L3_128_361G1_scaffold_32_29
Desulfosporosinus orientis, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30293..30733
DNA (441bp) protein (147aa)
Thioredoxin reductase n=1 Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7W920_DESOD
thioredoxin reductase
Thioredoxin reductase {ECO:0000313|EMBL:AET68229.1}; TaxID=768706 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 /; VKM B-1628) (Desulfotomaculum orientis).;"
L3_128_361G1_scaffold_32_30
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

30734..31012
DNA (279bp) protein (93aa)
BFD domain protein (2Fe-2S)-binding domain protein n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R250_SPISS
BFD domain-containing protein (2Fe-2S)-binding domain-containing protein
BFD domain protein (2Fe-2S)-binding domain protein {ECO:0000313|EMBL:ADK81935.1}; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
Displaying items 1-30 of 147 in total

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