ggKbase home page

L3_128_361G1_scaffold_219

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_361G1_scaffold_219_1
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..796
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBI6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47714.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
putative site-specific recombinase
L3_128_361G1_scaffold_219_2
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

851..1168
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P1X4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM97644.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L3_128_361G1_scaffold_219_3
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1368..2237)
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6H2K6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27716.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L3_128_361G1_scaffold_219_4
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2227..5304)
DNA (3078bp) protein (1026aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QYC4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK62564.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
phage-related hypothetical protein
L3_128_361G1_scaffold_219_5
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5520..5921
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PCJ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS10947.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L3_128_361G1_scaffold_219_6
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6221..6655
DNA (435bp) protein (145aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2Q9Q3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK61334.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_128_361G1_scaffold_219_7
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6643..8583
DNA (1941bp) protein (647aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBK5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47733.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_128_361G1_scaffold_219_8
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8596..8871
DNA (276bp) protein (92aa)
Excisionase family DNA binding domain-containing protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBK6_9FIRM
Excisionase family DNA binding domain-containing protein {ECO:0000313|EMBL:EGJ47734.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_128_361G1_scaffold_219_9
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8991..10220
DNA (1230bp) protein (410aa)
Site-specific recombinase, phage integrase family n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P1V8_9FIRM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EDM97628.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
putative site-specific recombinase
L3_128_361G1_scaffold_219_10
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10300..10887)
DNA (588bp) protein (196aa)
Putative superoxide reductase n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6R4J9_9FIRM
Putative superoxide reductase {ECO:0000313|EMBL:CDC29247.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
Predicted acetyltransferase
L3_128_361G1_scaffold_219_11
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11139..12272)
DNA (1134bp) protein (378aa)
hypothetical protein n=1 Tax=Virgibacillus halodenitrificans RepID=UPI000367EE82
Uncharacterized protein {ECO:0000313|EMBL:EOT22636.1}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
putative ATPase
L3_128_361G1_scaffold_219_12
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12269..13012)
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 6_1_45 RepID=H1BBA9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO26825.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
hypothetical protein
L3_128_361G1_scaffold_219_13
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

13739..15043
DNA (1305bp) protein (435aa)
Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen (EC:3.6.1.-)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H1Z0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY22064.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
L3_128_361G1_scaffold_219_14
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

15070..18000
DNA (2931bp) protein (977aa)
Type III restriction protein res subunit n=5 Tax=Pelosinus fermentans RepID=I8RK93_9FIRM
type III restriction protein res subunit
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
L3_128_361G1_scaffold_219_15
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18548..19258
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBI5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47713.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_128_361G1_scaffold_219_16
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19255..20223
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBI6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47714.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
putative site-specific recombinase
L3_128_361G1_scaffold_219_17
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20278..20595
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P1X4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM97644.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L3_128_361G1_scaffold_219_18
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21154..21420
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PCK1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS10956.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L3_128_361G1_scaffold_219_19
Acholeplasma laidlawii, Acholeplasma, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

21510..23288
DNA (1779bp) protein (593aa)
hsdM2; type I restriction enzyme, M protein (EC:2.1.1.72)
Type I restriction enzyme, M protein {ECO:0000313|EMBL:ABX81871.1}; EC=2.1.1.72 {ECO:0000313|EMBL:ABX81871.1};; TaxID=441768 species="Bacteria; Tenericutes; Mollicutes; Acholeplasmatales; Acholeplasmataceae; Acholeplasma.;" source="Acholeplasma laidlawii (strain PG-8A).;"
Type I restriction enzyme, M protein n=1 Tax=Acholeplasma laidlawii (strain PG-8A) RepID=A9NHP1_ACHLI
L3_128_361G1_scaffold_219_20
RIFOXYD2_FULL_Proteobacteria_50_16_curated, Proteobacteria, Bacteria

Not on your lists

23281..24522
DNA (1242bp) protein (414aa)
putative restriction endonuclease S subunit (EC:3.1.21.3)
Putative restriction endonuclease S subunit n=2 Tax=Ketogulonicigenium vulgare RepID=E3F4S4_KETVY
Tax=RIFOXYD2_FULL_Proteobacteria_50_16_curated
L3_128_361G1_scaffold_219_21
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24644..25702
DNA (1059bp) protein (353aa)
Mutator mutT protein {ECO:0000313|EMBL:EEG37445.1}; EC=3.6.1.- {ECO:0000313|EMBL:EEG37445.1};; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
hypothetical protein n=1 Tax=Clostridiales bacterium NK3B98 RepID=UPI0003B34E28
L3_128_361G1_scaffold_219_22
unknown

Not on your lists

25695..25883
DNA (189bp) protein (63aa)

This feature has no annotations

L3_128_361G1_scaffold_219_23
Acholeplasma laidlawii, Acholeplasma, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

25896..29000
DNA (3105bp) protein (1035aa)
hsdR2; type I restriction enzyme, R subunit (EC:3.1.21.3)
Type I restriction enzyme, R subunit {ECO:0000313|EMBL:ABX81868.1}; EC=3.1.21.3 {ECO:0000313|EMBL:ABX81868.1};; TaxID=441768 species="Bacteria; Tenericutes; Mollicutes; Acholeplasmatales; Acholeplasmataceae; Acholeplasma.;" source="Acholeplasma laidlawii (strain PG-8A).;"
Type I restriction enzyme, R subunit n=1 Tax=Acholeplasma laidlawii (strain PG-8A) RepID=A9NHN8_ACHLI
L3_128_361G1_scaffold_219_24
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

29090..32233
DNA (3144bp) protein (1048aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EJV0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA97609.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
hypothetical protein
L3_128_361G1_scaffold_219_25
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32287..32994
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PCJ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS10949.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
L3_128_361G1_scaffold_219_26
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33195..33374
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBK1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47729.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_128_361G1_scaffold_219_27
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33371..33916
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBK2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47730.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_128_361G1_scaffold_219_28
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34104..34523
DNA (420bp) protein (140aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QZE1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK68330.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_128_361G1_scaffold_219_29
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34511..36457
DNA (1947bp) protein (649aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBK5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47733.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_128_361G1_scaffold_219_30
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36527..36745
DNA (219bp) protein (73aa)
DNA binding domain, excisionase family n=2 Tax=Oscillibacter RepID=U2QM97_9FIRM
DNA binding domain, excisionase family {ECO:0000313|EMBL:ERK68332.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
Displaying items 1-30 of 56 in total

View Taxonomy