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L3_128_361G1_scaffold_270

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_361G1_scaffold_270_1
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..664
DNA (663bp) protein (221aa)
Endopeptidase Clp n=3 Tax=Clostridiales RepID=G9YX79_9FIRM
Endopeptidase Clp {ECO:0000313|EMBL:ERI77161.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
S14 family peptidase
L3_128_361G1_scaffold_270_2
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

826..1689
DNA (864bp) protein (288aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
uppP; undecaprenyl-diphosphatase (EC:3.6.1.27)
Undecaprenyl-diphosphatase n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P0A0_9FIRM
L3_128_361G1_scaffold_270_3
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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1769..4588
DNA (2820bp) protein (940aa)
FtsK/SpoIIIE family protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P0A1_9FIRM
FtsK/SpoIIIE family protein {ECO:0000313|EMBL:EDM98251.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
ftsK; cell division protein FtsK
L3_128_361G1_scaffold_270_4
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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4602..5000
DNA (399bp) protein (133aa)
Acetyltransferase, GNAT family n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YLD8_9FIRM
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EHM54803.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L3_128_361G1_scaffold_270_5
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5102..6484)
DNA (1383bp) protein (461aa)
Dihydrolipoyl dehydrogenase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CEE0_9FIRM
Dihydrolipoyl dehydrogenase {ECO:0000313|EMBL:KGF56794.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
dihydrolipoamide dehydrogenase
L3_128_361G1_scaffold_270_6
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6794..8242)
DNA (1449bp) protein (483aa)
Glycine dehydrogenase (aminomethyl-transferring) {ECO:0000256|SAAS:SAAS00022796}; EC=1.4.4.2 {ECO:0000256|SAAS:SAAS00022796};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CEE1_9FIRM
glycine dehydrogenase subunit beta
L3_128_361G1_scaffold_270_7
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8239..9555)
DNA (1317bp) protein (439aa)
Probable glycine dehydrogenase (decarboxylating) subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712, ECO:0000256|SAAS:SAAS00015358}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00712, ECO:0000256|SAAS:SAAS00022796};; Glycine cleavage system P-protein subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; Glycine decarboxylase subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; Glycine dehydrogenase (aminomethyl-transferring) subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
gcvPA; glycine cleavage system P protein subunit 1 (EC:1.4.4.2)
Probable glycine dehydrogenase [decarboxylating] subunit 1 n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2B6S2_9CLOT
L3_128_361G1_scaffold_270_8
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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comp(9559..9939)
DNA (381bp) protein (127aa)
Glycine cleavage system H protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SJ00_9FIRM
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
gcvH; glycine cleavage system H protein
L3_128_361G1_scaffold_270_9
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10010..11089)
DNA (1080bp) protein (360aa)
Aminomethyltransferase {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981}; EC=2.1.2.10 {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981};; Glycine cleavage system T protein {ECO:0000256|HAMAP-Rule:MF_00259}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
aminomethyltransferase (EC:2.1.2.10)
Aminomethyltransferase n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2D2T3_9CLOT
L3_128_361G1_scaffold_270_10
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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11567..13486
DNA (1920bp) protein (640aa)
FHA domain protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YPG8_9FIRM
FHA domain protein {ECO:0000313|EMBL:EHM52700.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L3_128_361G1_scaffold_270_11
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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13473..14843
DNA (1371bp) protein (457aa)
Peptidoglycan glycosyltransferase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9U4_9FIRM
Peptidoglycan glycosyltransferase {ECO:0000313|EMBL:EGJ47122.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
putative penicillin-binding protein A
L3_128_361G1_scaffold_270_12
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15146..16207)
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M7T5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS66883.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
Glycosyltransferases involved in cell wall biogenesis
L3_128_361G1_scaffold_270_13
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16324..18111)
DNA (1788bp) protein (596aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YR45_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO31012.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_128_361G1_scaffold_270_14
Alcanivorax hongdengensis, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(18231..19076)
DNA (846bp) protein (282aa)
Hydroxyacylglutathione hydrolase {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352}; EC=3.1.2.6 {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352};; Glyoxalase II {ECO:0000256|HAMAP-Rule:MF_01374}; TaxID=1177179 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax hongdengensis A-11-3.;"
Hydroxyacylglutathione hydrolase n=1 Tax=Alcanivorax hongdengensis A-11-3 RepID=L0WGH6_9GAMM
gloB; putative hydroxyacylglutathione hydrolase
L3_128_361G1_scaffold_270_15
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19073..19654)
DNA (582bp) protein (194aa)
HDIG domain protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2DGX9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF53289.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_128_361G1_scaffold_270_16
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20038..21045)
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XE82_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46382.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_128_361G1_scaffold_270_17
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21045..21986)
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NU19_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDN00366.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
AraC family transcriptional regulator
L3_128_361G1_scaffold_270_18
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22089..22859)
DNA (771bp) protein (257aa)
DNA-binding helix-turn-helix protein n=3 Tax=Clostridiales RepID=G9YX77_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EHM37915.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
XRE family transcriptional regulator
L3_128_361G1_scaffold_270_19
unknown

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23284..23508
DNA (225bp) protein (75aa)

This feature has no annotations

L3_128_361G1_scaffold_270_20
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23625..24746
DNA (1122bp) protein (374aa)
Citrate transporter n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YX74_9FIRM
Citrate transporter {ECO:0000313|EMBL:EHM37912.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
transporter, YbiR family
L3_128_361G1_scaffold_270_21
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24844..26685
DNA (1842bp) protein (614aa)
Radical SAM domain protein n=3 Tax=Clostridiales RepID=G9YX72_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55806.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
radical SAM protein
L3_128_361G1_scaffold_270_22
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26713..27384
DNA (672bp) protein (224aa)
Radical SAM-linked protein n=3 Tax=Clostridiales RepID=G9YX71_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55805.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_128_361G1_scaffold_270_23
Oxalobacter formigenes, Oxalobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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27797..29923
DNA (2127bp) protein (709aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Oxalobacter formigenes HOxBLS RepID=C3X4Y5_OXAFO
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EEO28271.1}; TaxID=556268 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Oxalobacter.;" source="Oxalobacter formigenes HOxBLS.;"
response regulator receiver:Metal-dependent phosphohydrolase
L3_128_361G1_scaffold_270_24
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29998..30585)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NV92_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDN00293.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
conserved membrane protein of unknown function
L3_128_361G1_scaffold_270_25
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30667..31155)
DNA (489bp) protein (163aa)
YbaK/proline--tRNA ligase associated domain protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NV91_9FIRM
YbaK/proline--tRNA ligase associated domain protein {ECO:0000313|EMBL:EDN00292.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
regulatory protein
L3_128_361G1_scaffold_270_26
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(31158..31550)
DNA (393bp) protein (131aa)
Thioesterase family protein n=2 Tax=Clostridiales RepID=G9YX66_9FIRM
Thioesterase family protein {ECO:0000313|EMBL:EHM37904.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
Thioesterase superfamily
L3_128_361G1_scaffold_270_27
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(31685..32770)
DNA (1086bp) protein (362aa)
ABC transporter, solute-binding protein n=2 Tax=Oscillibacter RepID=U2QVD2_9FIRM
ABC transporter, solute-binding protein {ECO:0000313|EMBL:ERK66875.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
potD; spermidine/putrescine ABC transporter spermidine/putrescine-binding protein
L3_128_361G1_scaffold_270_28
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32837..33700)
DNA (864bp) protein (288aa)
ABC transporter, permease protein n=2 Tax=Oscillibacter RepID=U2REB7_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:ERK66874.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
potC; spermidine/putrescine ABC transporter permease protein
L3_128_361G1_scaffold_270_29
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33697..34617)
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M6B1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS63402.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
potB; spermidine/putrescine ABC transporter permease protein
L3_128_361G1_scaffold_270_30
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34607..35794)
DNA (1188bp) protein (396aa)
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000256|HAMAP-Rule:MF_01726}; EC=3.6.3.31 {ECO:0000256|HAMAP-Rule:MF_01726};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
potA; spermidine/putrescine ABC transporter ATP-binding protein (EC:3.6.3.31)
Spermidine/putrescine transport system ATP-binding protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XA30_9FIRM
Displaying items 1-30 of 48 in total

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