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L3_128_361G1_scaffold_550

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_361G1_scaffold_550_1
unknown

Not on your lists

2..493
DNA (492bp) protein (164aa)

This feature has no annotations

L3_128_361G1_scaffold_550_2
unknown

Not on your lists

490..1176
DNA (687bp) protein (229aa)

This feature has no annotations

L3_128_361G1_scaffold_550_3
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1244..1828)
DNA (585bp) protein (195aa)
Helix-turn-helix domain protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JPP3_CELLD
hypothetical protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:ADZ83703.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_128_361G1_scaffold_550_4
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1884..2351)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NQ12_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDN01937.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
L3_128_361G1_scaffold_550_5
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2352..2927)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NQ13_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDN01938.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L3_128_361G1_scaffold_550_6
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2924..3979)
DNA (1056bp) protein (352aa)
Baseplate J-like protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NQ14_9FIRM
Baseplate J-like protein {ECO:0000313|EMBL:EDN01939.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
baseplate J-like family protein
L3_128_361G1_scaffold_550_7
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3993..4337)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NQ15_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF54788.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_128_361G1_scaffold_550_8
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4328..4705)
DNA (378bp) protein (126aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YSH2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM46106.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L3_128_361G1_scaffold_550_9
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4710..5651)
DNA (942bp) protein (314aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CDW8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF54786.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_128_361G1_scaffold_550_10
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5651..6226)
DNA (576bp) protein (192aa)
LysM domain protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2AGL4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF54785.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_128_361G1_scaffold_550_11
unknown

Not on your lists

comp(6249..6815)
DNA (567bp) protein (189aa)

This feature has no annotations

L3_128_361G1_scaffold_550_12
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6812..7021)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XF89_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46109.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_128_361G1_scaffold_550_13
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6982..7446)
DNA (465bp) protein (155aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CDX2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33248.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_128_361G1_scaffold_550_14
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7443..7832)
DNA (390bp) protein (130aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YSG6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF54783.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_128_361G1_scaffold_550_15
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7849..8883)
DNA (1035bp) protein (345aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CDX4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33250.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_128_361G1_scaffold_550_16
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8880..9386)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NQ24_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDN01949.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L3_128_361G1_scaffold_550_17
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9391..9702)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YSG3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM46097.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L3_128_361G1_scaffold_550_18
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9699..10046)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NQ26_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDN01951.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
L3_128_361G1_scaffold_550_19
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10075..11106)
DNA (1032bp) protein (344aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CDX8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33254.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_128_361G1_scaffold_550_20
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11132..11473)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NQ28_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDN01953.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
L3_128_361G1_scaffold_550_21
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11518..12444)
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NQ29_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDN01954.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L3_128_361G1_scaffold_550_22
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12441..13634)
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NQ30_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDN01955.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L3_128_361G1_scaffold_550_23
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13653..14909)
DNA (1257bp) protein (419aa)
Phage terminase, large subunit, PBSX family n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NQ31_9FIRM
Phage terminase, large subunit, PBSX family {ECO:0000313|EMBL:EDN01956.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
putative terminase large subunit
L3_128_361G1_scaffold_550_24
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14899..15207)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NQ32_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDN01957.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
L3_128_361G1_scaffold_550_25
Alicyclobacillus acidocaldarius, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15354..16805)
DNA (1452bp) protein (484aa)
hypothetical protein n=1 Tax=Bacillus sp. L1(2012) RepID=UPI00035E88EF
glycine betaine aldehyde dehydrogenase
Glycine betaine aldehyde dehydrogenase {ECO:0000313|EMBL:AEJ42743.1}; TaxID=1048834 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacillus acidocaldarius (strain Tc-4-1) (Bacillus; acidocaldarius).;"
L3_128_361G1_scaffold_550_26
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(16827..17978)
DNA (1152bp) protein (384aa)
hypothetical protein n=1 Tax=Spirochaeta bajacaliforniensis RepID=UPI0003651FD4
iron-containing alcohol dehydrogenase
Iron-containing alcohol dehydrogenase {ECO:0000313|EMBL:ADK79176.1}; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
L3_128_361G1_scaffold_550_27
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18232..19461)
DNA (1230bp) protein (410aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VXE8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ35597.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
hypothetical protein
L3_128_361G1_scaffold_550_28
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19490..24424)
DNA (4935bp) protein (1645aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VTL1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ35596.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
fibronectin type III domain protein
L3_128_361G1_scaffold_550_29
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24704..25546)
DNA (843bp) protein (281aa)
Transcriptional regulator, AraC family n=1 Tax=Ruminococcus torques L2-14 RepID=D4M533_9FIRM
transcriptional regulator, AraC family
Transcriptional regulator AraC family {ECO:0000313|EMBL:CDC17056.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L3_128_361G1_scaffold_550_30
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26156..27586
DNA (1431bp) protein (477aa)
GntP family permease n=2 Tax=Oscillibacter RepID=U2SAU7_9FIRM
GntP family permease {ECO:0000313|EMBL:ERK62718.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
H+/gluconate symporter family protein
Displaying items 1-30 of 34 in total

View Taxonomy