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L3_128_361G1_scaffold_39

Search features with annotation key words

Displaying items 1-30 of 157 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_361G1_scaffold_39_1
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(2..142)
DNA (141bp) protein (47aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C1D9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS75194.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
L3_128_361G1_scaffold_39_2
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(759..2189)
DNA (1431bp) protein (477aa)
Glycogen synthase {ECO:0000256|HAMAP-Rule:MF_00484}; EC=2.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00484};; Starch [bacterial glycogen] synthase {ECO:0000256|HAMAP-Rule:MF_00484}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
glgA; glycogen/starch synthase, ADP-glucose type family protein (EC:2.4.1.21)
Glycogen synthase n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GDR7_9FIRM
L3_128_361G1_scaffold_39_3
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(2189..3298)
DNA (1110bp) protein (370aa)
glucose-1-phosphate adenylyltransferase, GlgD subunit (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GDR8_9FIRM
Glucose-1-phosphate adenylyltransferase {ECO:0000313|EMBL:EFW03721.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
L3_128_361G1_scaffold_39_4
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(3322..4443)
DNA (1122bp) protein (374aa)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565}; EC=2.7.7.27 {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565};; ADP-glucose pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00624}; ADP-glucose synthase {ECO:0000256|HAMAP-Rule:MF_00624}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
Glucose-1-phosphate adenylyltransferase n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GDR9_9FIRM
glucose-1-phosphate adenylyltransferase
L3_128_361G1_scaffold_39_5
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(4598..6508)
DNA (1911bp) protein (637aa)
Pullulanase, type I {ECO:0000313|EMBL:EDS76111.1}; EC=3.2.1.41 {ECO:0000313|EMBL:EDS76111.1};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Pullulanase, type I n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BYS2_9FIRM
pullulanase
L3_128_361G1_scaffold_39_6
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(6776..9172)
DNA (2397bp) protein (799aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
glgP; glycogen phosphorylase (EC:2.4.1.1)
Phosphorylase n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G608_9FIRM
L3_128_361G1_scaffold_39_7
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(9192..11048)
DNA (1857bp) protein (619aa)
1,4-alpha-glucan branching enzyme {ECO:0000256|SAAS:SAAS00046836}; EC=2.4.1.18 {ECO:0000256|SAAS:SAAS00046836};; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
1,4-alpha-glucan branching enzyme n=5 Tax=Erysipelotrichaceae RepID=B0N3S5_9FIRM
Carbohydrate-Binding Module Family 48 protein / Glycoside Hydrolase Family 13 protein
L3_128_361G1_scaffold_39_8
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(11260..12963)
DNA (1704bp) protein (568aa)
Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II n=3 Tax=Erysipelotrichaceae RepID=B0N3S1_9FIRM
Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II {ECO:0000313|EMBL:EDS19093.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
D-Ribose 1,5-phosphomutase
L3_128_361G1_scaffold_39_9
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(13061..13264)
DNA (204bp) protein (68aa)
HPr family phosphocarrier n=1 Tax=Eggerthia catenaformis OT 569 = DSM 20559 RepID=M2NEB3_9FIRM
HPr family phosphocarrier {ECO:0000313|EMBL:CCZ32176.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
ptsH; phosphocarrier protein HPr
L3_128_361G1_scaffold_39_10
Firmicutes bacterium CAG:270, Firmicutes, Bacteria

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comp(13394..13612)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:270 RepID=R7BZS6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD71326.1}; TaxID=1263014 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:270.;"
hypothetical protein
L3_128_361G1_scaffold_39_11
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(13807..14970)
DNA (1164bp) protein (388aa)
cation diffusion facilitator family transporter n=1 Tax=Coprobacillus sp. D6 RepID=UPI0003099DD5
Cation efflux pump {ECO:0000313|EMBL:EFW05433.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
cation efflux system protein
L3_128_361G1_scaffold_39_12
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14967..15770)
DNA (804bp) protein (268aa)
hisK; histidinol-phosphatase (EC:3.1.3.15)
Histidinol phosphate phosphatase HisJ family protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q3Q0_9FIRM
Histidinol phosphate phosphatase HisJ family protein {ECO:0000313|EMBL:CCZ23430.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L3_128_361G1_scaffold_39_13
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15775..16149)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N554_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS18222.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
L3_128_361G1_scaffold_39_14
unknown

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comp(16139..16282)
DNA (144bp) protein (48aa)

This feature has no annotations

L3_128_361G1_scaffold_39_15
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16279..17082)
DNA (804bp) protein (268aa)
Metal-dependent hydrolases of the beta-lactamase superfamily III n=1 Tax=Coprococcus catus GD/7 RepID=D4J6A6_9FIRM
Metal-dependent hydrolases of the beta-lactamase superfamily III
Metal-dependent hydrolases of the beta-lactamase superfamily III {ECO:0000313|EMBL:CBK79877.1}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
L3_128_361G1_scaffold_39_16
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17280..18638
DNA (1359bp) protein (453aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6FR76_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:KIE46529.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
MATE efflux family protein
L3_128_361G1_scaffold_39_17
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(18635..19831)
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. D7 RepID=C3RH47_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ32040.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
DEAD/DEAH box helicase
L3_128_361G1_scaffold_39_18
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(19904..20875)
DNA (972bp) protein (324aa)
Phosphate starvation-induced protein phoH n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GD72_9FIRM
Phosphate starvation-induced protein phoH {ECO:0000313|EMBL:EFW03923.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
phoH; phosphate starvation-induced protein PhoH
L3_128_361G1_scaffold_39_19
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(20850..21821)
DNA (972bp) protein (324aa)
Putative sporulation protein YqfD n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BYV8_9FIRM
Putative sporulation protein YqfD {ECO:0000313|EMBL:EDS75999.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
L3_128_361G1_scaffold_39_20
unknown

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comp(21811..22008)
DNA (198bp) protein (66aa)

This feature has no annotations

L3_128_361G1_scaffold_39_21
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

22118..23551
DNA (1434bp) protein (478aa)
bgl; putative phospho-beta-glucosidase (EC:3.2.1.86)
Glycoside hydrolase family 1 n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G728_9FIRM
Glycoside hydrolase family 1 {ECO:0000313|EMBL:EFW06106.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
L3_128_361G1_scaffold_39_22
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24035..25198)
DNA (1164bp) protein (388aa)
hypothetical protein n=1 Tax=Allobaculum stercoricanis RepID=UPI00037E53EC
Uncharacterized protein {ECO:0000313|EMBL:EGN41544.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_128_361G1_scaffold_39_23
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25285..26826)
DNA (1542bp) protein (514aa)
malL2; oligo-1,6-glucosidase MalL (EC:3.2.1.10)
alpha amylase, catalytic region n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C05A2
Uncharacterized protein {ECO:0000313|EMBL:EDN78367.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
L3_128_361G1_scaffold_39_24
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26979..28211)
DNA (1233bp) protein (411aa)
Aminopeptidase P domain protein {ECO:0000313|EMBL:EEG93822.1}; EC=3.4.-.- {ECO:0000313|EMBL:EEG93822.1};; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Xaa-Pro aminopeptidase (EC:3.4.11.9)
Aminopeptidase P domain protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FU06_9FIRM
L3_128_361G1_scaffold_39_25
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(28341..29096)
DNA (756bp) protein (252aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G7J0_9FIRM
NIF3 family protein
L3_128_361G1_scaffold_39_26
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(29083..29781)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9R1N5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS19171.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
hypothetical protein
L3_128_361G1_scaffold_39_27
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(29786..31042)
DNA (1257bp) protein (419aa)
RNA polymerase sigma factor SigA n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G7I8_9FIRM
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
sigA; RNA polymerase sigma factor RpoD
L3_128_361G1_scaffold_39_28
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(31054..32808)
DNA (1755bp) protein (585aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
DNA primase n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G7I7_9FIRM
hypothetical protein
L3_128_361G1_scaffold_39_29
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


comp(32826..34196)
DNA (1371bp) protein (457aa)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
glycyl-tRNA synthetase (EC:6.1.1.14)
Glycine--tRNA ligase n=3 Tax=Coprobacillus RepID=C3RLQ2_9FIRM
L3_128_361G1_scaffold_39_30
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(34317..36146)
DNA (1830bp) protein (610aa)
UPF0313 protein HMPREF9488_00698 n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G7I4_9FIRM
UPF0313 protein HMPREF9488_00698 {ECO:0000256|HAMAP-Rule:MF_01251}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
radical SAM domain-containing protein
Displaying items 1-30 of 157 in total

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