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L3_128_361G1_scaffold_84

Search features with annotation key words

Displaying items 1-30 of 98 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_361G1_scaffold_84_1
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..92)
DNA (90bp) protein (30aa)
Transposase n=2 Tax=Firmicutes RepID=A8RB38_9FIRM
Transposase {ECO:0000313|EMBL:CDE23127.1}; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
L3_128_361G1_scaffold_84_2
Johnsonella ignava, Johnsonella, Clostridiales, Clostridia, Firmicutes, Bacteria

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234..737
DNA (504bp) protein (168aa)
Putative uncharacterized protein n=1 Tax=Johnsonella ignava ATCC 51276 RepID=G5GGG5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHI56125.1}; TaxID=679200 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Johnsonella.;" source="Johnsonella ignava ATCC 51276.;"
hypothetical protein
L3_128_361G1_scaffold_84_3
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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853..1071
DNA (219bp) protein (73aa)
Preprotein translocase subunit SecG n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GB47_9FIRM
Preprotein translocase subunit SecG {ECO:0000313|EMBL:EFW04863.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
secG; preprotein translocase subunit SecG
L3_128_361G1_scaffold_84_4
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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1113..3356
DNA (2244bp) protein (748aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Ribonuclease R n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BZE7_9FIRM
rnr; exoribonuclease R
L3_128_361G1_scaffold_84_5
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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3369..3818
DNA (450bp) protein (150aa)
SsrA-binding protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GB49_9FIRM
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
smpB; SsrA-binding protein
L3_128_361G1_scaffold_84_6
Catenibacterium sp. CAG:290, Catenibacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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4287..4445
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Catenibacterium sp. CAG:290 RepID=R7GII4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE26935.1}; TaxID=1262767 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Catenibacterium; environmental samples.;" source="Catenibacterium sp. CAG:290.;"
L3_128_361G1_scaffold_84_7
Catenibacterium sp. CAG:290, Catenibacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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4480..5040
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=E2NPZ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE26935.1}; TaxID=1262767 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Catenibacterium; environmental samples.;" source="Catenibacterium sp. CAG:290.;"
HipA-like C-terminal domain.
L3_128_361G1_scaffold_84_8
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5265..5603
DNA (339bp) protein (113aa)
Putative uncharacterized protein n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DJ93_CLOSC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK77767.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L3_128_361G1_scaffold_84_9
Clostridium sp. BNL1100, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5650..7107)
DNA (1458bp) protein (486aa)
ATPase component of ABC transporters with duplicated ATPase domain n=1 Tax=Clostridium sp. BNL1100 RepID=H2J9I5_9CLOT
ABC transporter ATPase
ATPase component of ABC transporters with duplicated ATPase domain {ECO:0000313|EMBL:AEY68002.1}; TaxID=755731 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BNL1100.;"
L3_128_361G1_scaffold_84_10
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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7497..8297
DNA (801bp) protein (267aa)
Transcriptional regulator, RpiR family n=5 Tax=Erysipelotrichaceae RepID=B0N7U7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ34958.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
transcriptional regulator, RpiR family
L3_128_361G1_scaffold_84_11
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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8438..11098
DNA (2661bp) protein (887aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9R784_9FIRM
Putative esterase {ECO:0000313|EMBL:EDS17688.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
Enterochelin esterase and related enzymes
L3_128_361G1_scaffold_84_12
Faecalitalea cylindroides, Faecalitalea, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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11628..12332
DNA (705bp) protein (235aa)
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family n=3 Tax=Firmicutes RepID=D4JF71_9FIRM
amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family {ECO:0000313|EMBL:CBK88843.1}; TaxID=717960 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Faecalitalea.;" source="Faecalitalea cylindroides T2-87.;"
L3_128_361G1_scaffold_84_13
Faecalitalea cylindroides, Faecalitalea, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12325..13059
DNA (735bp) protein (245aa)
ABC-type polar amino acid transport system, ATPase component n=3 Tax=Firmicutes RepID=D4JF70_9FIRM
ABC-type polar amino acid transport system, ATPase component
ABC-type polar amino acid transport system, ATPase component {ECO:0000313|EMBL:CBK88842.1}; TaxID=717960 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Faecalitalea.;" source="Faecalitalea cylindroides T2-87.;"
L3_128_361G1_scaffold_84_14
Faecalitalea cylindroides, Faecalitalea, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

13076..13924
DNA (849bp) protein (283aa)
ABC-type amino acid transport/signal transduction systems, periplasmic component/domain n=1 Tax=[Eubacterium] cylindroides T2-87 RepID=D4JF69_9FIRM
ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
ABC-type amino acid transport/signal transduction systems, periplasmic component/domain {ECO:0000313|EMBL:CBK88841.1}; TaxID=717960 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Faecalitalea.;" source="Faecalitalea cylindroides T2-87.;"
L3_128_361G1_scaffold_84_15
Faecalitalea cylindroides, Faecalitalea, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

13974..15140
DNA (1167bp) protein (389aa)
Amidohydrolase n=1 Tax=Firmicutes bacterium CAG:308 RepID=R7A7N6_9FIRM
Amidohydrolase {ECO:0000313|EMBL:ERK41016.1}; TaxID=649755 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Faecalitalea.;" source="Faecalitalea cylindroides ATCC 27803.;"
amidohydrolase
L3_128_361G1_scaffold_84_16
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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15199..16155
DNA (957bp) protein (319aa)
CobW/P47K family protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C4W9_9FIRM
CobW/P47K family protein {ECO:0000313|EMBL:EDS73713.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
cobalamin synthesis protein, P47K
L3_128_361G1_scaffold_84_17
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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16157..17095
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GAL6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW04917.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
hypothetical protein
L3_128_361G1_scaffold_84_18
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

17198..17788
DNA (591bp) protein (197aa)
Ribonuclease HI n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G8F2_9FIRM
Ribonuclease HI {ECO:0000313|EMBL:EFW05664.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
ribonuclease
L3_128_361G1_scaffold_84_19
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

17785..18303
DNA (519bp) protein (173aa)
Ribonuclease M5 {ECO:0000256|HAMAP-Rule:MF_01469}; EC=3.1.26.8 {ECO:0000256|HAMAP-Rule:MF_01469};; RNase M5 {ECO:0000256|HAMAP-Rule:MF_01469}; Ribosomal RNA terminal maturase M5 {ECO:0000256|HAMAP-Rule:MF_01469}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
rnmV; ribonuclease M5 (EC:3.1.26.8)
Ribonuclease M5 n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C5B1_9FIRM
L3_128_361G1_scaffold_84_20
Catenibacterium sp. CAG:290, Catenibacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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18305..19120
DNA (816bp) protein (272aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=1262767 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Catenibacterium; environmental samples.;" source="Catenibacterium sp. CAG:290.;"
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Catenibacterium sp. CAG:290 RepID=R7GQ19_9FIRM
ksgA; dimethyladenosine transferase
L3_128_361G1_scaffold_84_21
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

19149..19904
DNA (756bp) protein (252aa)
YabG peptidase U57 n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C5A9_9FIRM
YabG peptidase U57 {ECO:0000313|EMBL:EDS73853.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
sporulation peptidase YabG
L3_128_361G1_scaffold_84_22
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

19910..20755
DNA (846bp) protein (282aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
ipk; 4-diphosphocytidyl-2C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GAQ1_9FIRM
L3_128_361G1_scaffold_84_23
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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20807..22210
DNA (1404bp) protein (468aa)
Bifunctional protein GlmU n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q4E3_9FIRM
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
UDP-N-acetylglucosamine pyrophosphorylase
L3_128_361G1_scaffold_84_24
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

22222..23181
DNA (960bp) protein (320aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C5A6_9FIRM
L3_128_361G1_scaffold_84_25
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

23318..23587
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C4K2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS74031.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
L3_128_361G1_scaffold_84_26
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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23606..24565
DNA (960bp) protein (320aa)
Oxidoreductase n=1 Tax=Lachnospiraceae bacterium CAG:25 RepID=R5YXG2_9FIRM
Oxidoreductase {ECO:0000313|EMBL:CDA31500.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
Predicted dehydrogenases and related proteins
L3_128_361G1_scaffold_84_27
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

24577..25248
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3H1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS74205.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
hypothetical protein
L3_128_361G1_scaffold_84_28
Sebaldella termitidis, Sebaldella, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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25235..25990
DNA (756bp) protein (252aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Sebaldella termitidis (strain ATCC 33386 / NCTC 11300) RepID=D1APD8_SEBTE
4Fe-4S ferredoxin
4Fe-4S ferredoxin iron-sulfur binding domain protein {ECO:0000313|EMBL:ACZ09972.1}; TaxID=526218 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Sebaldella.;" source="Sebaldella termitidis (strain ATCC 33386 / NCTC 11300).;"
L3_128_361G1_scaffold_84_29
Eubacterium sp. CAG:274, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26226..27029
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:274 RepID=R6PSB6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC21401.1}; TaxID=1262888 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:274.;"
phosphate ABC transporter substrate-binding protein, PhoT family (TC 3.A.1.7.1)
L3_128_361G1_scaffold_84_30
Firmicutes bacterium CAG:534, Firmicutes, Bacteria

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27055..27981
DNA (927bp) protein (309aa)
Phosphate ABC transporter permease PstC n=1 Tax=Firmicutes bacterium CAG:534 RepID=R6ZSW0_9FIRM
Phosphate ABC transporter permease PstC {ECO:0000313|EMBL:CDD46429.1}; TaxID=1263027 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:534.;"
phosphate ABC transporter permease
Displaying items 1-30 of 98 in total

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