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L3_128_361G1_scaffold_142

Search features with annotation key words

Displaying items 1-30 of 75 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_361G1_scaffold_142_1
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(129..1508)
DNA (1380bp) protein (460aa)
ywdH; aldehyde dehydrogenase YwdH (EC:1.2.1.3)
Aldehyde dehydrogenase YwdH n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MS99_CLOSA
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_128_361G1_scaffold_142_2
Bacillus akibai, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(1510..2268)
DNA (759bp) protein (253aa)
Uncharacterized protein n=7 Tax=Clostridium difficile RepID=G6BA78_CLODI
Uncharacterized protein {ECO:0000313|EMBL:GAE35605.1}; TaxID=1236973 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus akibai (strain ATCC 43226 / DSM 21942 / JCM 9157 / 1139).;"
hypothetical protein
L3_128_361G1_scaffold_142_3
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2285..2698)
DNA (414bp) protein (138aa)
Putative acyltransferase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MYV2_CLOSA
putative acyltransferase
Putative acyltransferase {ECO:0000313|EMBL:AGX44682.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_128_361G1_scaffold_142_4
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(2724..3995)
DNA (1272bp) protein (424aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=G9QZG8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ45204.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
hypothetical protein
L3_128_361G1_scaffold_142_5
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(4079..5416)
DNA (1338bp) protein (446aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GB87_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW04622.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
sucrose-6-phosphate hydrolase e1
L3_128_361G1_scaffold_142_6
unknown

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comp(5502..5639)
DNA (138bp) protein (46aa)

This feature has no annotations

L3_128_361G1_scaffold_142_7
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(5666..7867)
DNA (2202bp) protein (734aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
Exodeoxyribonuclease subunit V alpha n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G7M7_9FIRM
RecD/TraA family helicase
L3_128_361G1_scaffold_142_8
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(7868..9001)
DNA (1134bp) protein (378aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
tRNA-specific 2-thiouridylase MnmA n=2 Tax=Coprobacillus RepID=E7G7M6_9FIRM
mnmA; tRNA-specific 2-thiouridylase MnmA
L3_128_361G1_scaffold_142_9
Firmicutes bacterium CAG:631, Firmicutes, Bacteria

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comp(9056..10270)
DNA (1215bp) protein (405aa)
Aminopeptidase n=1 Tax=Firmicutes bacterium CAG:631 RepID=R5V3H6_9FIRM
Aminopeptidase {ECO:0000313|EMBL:CCZ84835.1}; TaxID=1262996 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:631.;"
peptidase M29 aminopeptidase II
L3_128_361G1_scaffold_142_10
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(10313..11233)
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. D7 RepID=C3RKT9_9FIRM
ROK family protein {ECO:0000313|EMBL:EDS17531.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
glk.2; glucokinase
L3_128_361G1_scaffold_142_11
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(11295..12266)
DNA (972bp) protein (324aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
rluC1; ribosomal large subunit pseudouridine synthase C (EC:5.4.99.24)
Pseudouridine synthase n=2 Tax=Clostridium spiroforme DSM 1552 RepID=B1C0S7_9FIRM
L3_128_361G1_scaffold_142_12
Mycoplasma sp. CAG:776, Mycoplasma, Mycoplasmatales, Mollicutes, Tenericutes, Bacteria

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12359..13027
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Mycoplasma sp. CAG:776 RepID=R7NJS1_9MOLU
Uncharacterized protein {ECO:0000313|EMBL:CDF12338.1}; TaxID=1262906 species="Bacteria; Tenericutes; Mollicutes; Mycoplasmataceae; Mycoplasma; environmental samples.;" source="Mycoplasma sp. CAG:776.;"
Hypothetical protein
L3_128_361G1_scaffold_142_13
Catenibacterium mitsuokai, Catenibacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(13051..14229)
DNA (1179bp) protein (393aa)
malate dehydrogenase n=1 Tax=Coprobacillus sp. D6 RepID=UPI0002DD82EC
Malic enzyme, NAD binding domain protein {ECO:0000313|EMBL:EEF94430.1}; TaxID=451640 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Catenibacterium.;" source="Catenibacterium mitsuokai DSM 15897.;"
malic protein NAD-binding
L3_128_361G1_scaffold_142_14
Pelosinus fermentans, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(14213..15325)
DNA (1113bp) protein (371aa)
hydrolase, HAD-superfamily, subfamily IIIA (EC:3.1.3.18)
Hydrolase, HAD-superfamily, subfamily IIIA {ECO:0000313|EMBL:AJQ26326.1}; EC=3.1.3.18 {ECO:0000313|EMBL:AJQ26326.1};; TaxID=1192197 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus fermentans JBW45.;"
Hydrolase, HAD-superfamily, subfamily IIIA n=1 Tax=Pelosinus fermentans JBW45 RepID=I9NKC5_9FIRM
L3_128_361G1_scaffold_142_15
Erysipelotrichaceae bacterium 3_1_53, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(15328..16515)
DNA (1188bp) protein (396aa)
Bacterial capsule synthesis protein n=1 Tax=Erysipelotrichaceae bacterium 3_1_53 RepID=E2SR28_9FIRM
Bacterial capsule synthesis protein {ECO:0000313|EMBL:EFP60016.1}; TaxID=658659 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 3_1_53.;"
capsule biosynthesis protein capA
L3_128_361G1_scaffold_142_16
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16520..17044)
DNA (525bp) protein (175aa)
Putative uncharacterized protein n=1 Tax=Clostridium sporogenes PA 3679 RepID=G9F1G0_CLOSG
Putative uncharacterized protein {ECO:0000313|EMBL:EHN14728.1}; TaxID=1075091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes PA 3679.;"
hypothetical protein
L3_128_361G1_scaffold_142_17
Catenibacterium sp. CAG:290, Catenibacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(17139..17465)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Catenibacterium sp. CAG:290 RepID=R7GMC9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE28186.1}; TaxID=1262767 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Catenibacterium; environmental samples.;" source="Catenibacterium sp. CAG:290.;"
hypothetical protein
L3_128_361G1_scaffold_142_18
Bacillus coagulans, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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17600..19051
DNA (1452bp) protein (484aa)
Cardiolipin synthase {ECO:0000256|HAMAP-Rule:MF_01916}; Short=CL synthase {ECO:0000256|HAMAP-Rule:MF_01916};; EC=2.7.8.- {ECO:0000256|HAMAP-Rule:MF_01916};; TaxID=1121088 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus coagulans DSM 1 = ATCC 7050.;"
phospholipase D n=1 Tax=Oceanobacillus kimchii RepID=UPI00034D5E8D
cls; cardiolipin synthase
L3_128_361G1_scaffold_142_19
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

19065..20069
DNA (1005bp) protein (335aa)
A/G-specific adenine glycosylase (EC:3.2.2.-)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GD71_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW03922.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
L3_128_361G1_scaffold_142_20
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20062..20490)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Bacillus cereus VD166 RepID=J8LC69_BACCE
Uncharacterized protein {ECO:0000313|EMBL:EJR73623.1}; TaxID=1053240 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus VD166.;"
helix-turn-helix family protein
L3_128_361G1_scaffold_142_21
Centipeda periodontii, Centipeda, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(20577..20969)
DNA (393bp) protein (131aa)
XRE family transcriptional regulator n=1 Tax=Centipeda periodontii DSM 2778 RepID=F5RNX3_9FIRM
XRE family transcriptional regulator {ECO:0000313|EMBL:EGK58363.1}; TaxID=888060 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Centipeda.;" source="Centipeda periodontii DSM 2778.;"
L3_128_361G1_scaffold_142_22
Clostridium sp. CAG:1219, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21128..21790
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1219 RepID=R5TCA2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ56631.1}; TaxID=1262772 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1219.;"
hypothetical protein
L3_128_361G1_scaffold_142_23
Treponema sp. OMZ 838, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(22208..22741)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Treponema medium ATCC 700293 RepID=S3KAK7_TREMD
nitroreductase
Nitroreductase {ECO:0000313|EMBL:AIW89064.1}; TaxID=1539298 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema sp. OMZ 838.;"
L3_128_361G1_scaffold_142_24
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22805..23392)
DNA (588bp) protein (196aa)
P-loop ATPase n=4 Tax=Clostridium butyricum RepID=B1QXY4_CLOBU
P-loop ATPase
P-loop ATPase {ECO:0000313|EMBL:CDM69344.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L3_128_361G1_scaffold_142_25
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

23699..25207
DNA (1509bp) protein (503aa)
IMP dehydrogenase (EC:1.1.1.205)
IMP dehydrogenase/GMP reductase n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GAE9_9FIRM
IMP dehydrogenase/GMP reductase {ECO:0000313|EMBL:EFW05157.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
L3_128_361G1_scaffold_142_26
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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25289..26533
DNA (1245bp) protein (415aa)
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01978}; EC=2.7.1.90 {ECO:0000256|HAMAP-Rule:MF_01978};; 6-phosphofructokinase, pyrophosphate dependent {ECO:0000256|HAMAP-Rule:MF_01978}; PPi-dependent phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_01978}; Pyrophosphate-dependent 6-phosphofructose-1-kinase {ECO:0000256|HAMAP-Rule:MF_01978}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
diphosphate--fructose-6-phosphate 1-phosphotransferase (EC:2.7.1.90)
Phosphofructokinase n=5 Tax=Erysipelotrichaceae RepID=B0N632_9FIRM
L3_128_361G1_scaffold_142_27
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(26530..27846)
DNA (1317bp) protein (439aa)
Transcriptional regulator, GntR family n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C392_9FIRM
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EDS74126.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
L3_128_361G1_scaffold_142_28
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27940..28509
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LTR4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO53505.1}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
hypothetical protein
L3_128_361G1_scaffold_142_29
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(28565..28768)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q7F2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24670.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
cspB; major cold shock protein CspB
L3_128_361G1_scaffold_142_30
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


comp(28863..30257)
DNA (1395bp) protein (465aa)
signal recognition particle protein Srp54 n=1 Tax=Coprobacillus sp. D6 RepID=UPI00031D6C55
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
signal recognition particle protein
Displaying items 1-30 of 75 in total

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