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L3_128_361G1_scaffold_368

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_361G1_scaffold_368_1
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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470..1342
DNA (873bp) protein (291aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
pyrB; Aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3A6_9FIRM
L3_128_361G1_scaffold_368_2
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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1335..2606
DNA (1272bp) protein (424aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
pyrC; dihydroorotase (EC:3.5.2.3)
Dihydroorotase n=3 Tax=Erysipelotrichaceae RepID=B0N650_9FIRM
L3_128_361G1_scaffold_368_3
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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2584..3375
DNA (792bp) protein (264aa)
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3A8_9FIRM
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; Dihydroorotate oxidase B, electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
pyrK_2; Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit
L3_128_361G1_scaffold_368_4
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

3368..4288
DNA (921bp) protein (307aa)
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule:MF_00224};; EC=1.3.-.- {ECO:0000256|HAMAP-Rule:MF_00224};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
dihydroorotate dehydrogenase (EC:1.3.98.1)
Dihydroorotate dehydrogenase n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3A9_9FIRM
L3_128_361G1_scaffold_368_5
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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4281..4991
DNA (711bp) protein (237aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
orotidine-5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G7K3_9FIRM
L3_128_361G1_scaffold_368_6
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

5050..5685
DNA (636bp) protein (212aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C1I2_9FIRM
L3_128_361G1_scaffold_368_7
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5993..6415)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9JW43_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS38395.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
hypothetical protein
L3_128_361G1_scaffold_368_8
[Eubacterium] dolichum, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

7386..8300
DNA (915bp) protein (305aa)
Cholinephosphate cytidylyltransferase/choline kinase family protein n=1 Tax=Eubacterium dolichum CAG:375 RepID=R7G588_9FIRM
Cholinephosphate cytidylyltransferase/choline kinase family protein {ECO:0000313|EMBL:EDP11968.1}; TaxID=428127 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="[Eubacterium] dolichum DSM 3991.;"
CTP:phosphocholine cytidylyltransferase-like protein
L3_128_361G1_scaffold_368_9
Treponema azotonutricium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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8784..9761
DNA (978bp) protein (326aa)
Putative ABC transporter, substrate-binding protein n=1 Tax=Treponema azotonutricium (strain ATCC BAA-888 / DSM 13862 / ZAS-9) RepID=F5YAY0_TREAZ
putative ABC transporter substrate-binding protein
Putative ABC transporter, substrate-binding protein {ECO:0000313|EMBL:AEF82913.1}; TaxID=545695 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema azotonutricium (strain ATCC BAA-888 / DSM 13862 / ZAS-9).;"
L3_128_361G1_scaffold_368_10
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9771..10553
DNA (783bp) protein (261aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0E8A2_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEG32336.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
hypothetical protein
L3_128_361G1_scaffold_368_11
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10534..13026
DNA (2493bp) protein (831aa)
Putative 2-aminoethylphosphonate ABC transporter, permease protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0E8A3_9CLOT
Putative 2-aminoethylphosphonate ABC transporter, permease protein {ECO:0000313|EMBL:EEG32337.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
putative ABC transporter permease
L3_128_361G1_scaffold_368_12
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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comp(13179..14108)
DNA (930bp) protein (310aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI000375B9DB
Integral membrane protein domain protein {ECO:0000313|EMBL:CCZ35741.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
transporter, drug/metabolite exporter family
L3_128_361G1_scaffold_368_13
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14105..14980)
DNA (876bp) protein (292aa)
licC; CTP:choline-phosphate cytidylyltransferase (EC:2.7.7.15)
CTP:choline-phosphate cytidylyltransferase {ECO:0000313|EMBL:CCO04333.1}; EC=2.7.7.15 {ECO:0000313|EMBL:CCO04333.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Cholinephosphate cytidylyltransferase/choline kinase n=1 Tax=Dorea formicigenerans CAG:28 RepID=R6SGJ1_9FIRM
L3_128_361G1_scaffold_368_14
Anaerococcus hydrogenalis, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14964..16808)
DNA (1845bp) protein (615aa)
licA; Choline kinase (EC:2.7.1.32)
Choline/ethanolamine kinase n=1 Tax=Anaerococcus hydrogenalis ACS-025-V-Sch4 RepID=F0GYH8_9FIRM
Choline/ethanolamine kinase {ECO:0000313|EMBL:EGC84684.1}; TaxID=879306 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus hydrogenalis ACS-025-V-Sch4.;"
L3_128_361G1_scaffold_368_15
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16973..17830
DNA (858bp) protein (286aa)
Lipopolysaccharide cholinephosphotransferase n=2 Tax=Eubacterium RepID=C4Z1G4_EUBE2
lipopolysaccharide cholinephosphotransferase
Lipopolysaccharide cholinephosphotransferase {ECO:0000313|EMBL:ACR71138.1}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
L3_128_361G1_scaffold_368_16
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17823..18680
DNA (858bp) protein (286aa)
LICD family protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BHE7_9FIRM
LICD family protein {ECO:0000313|EMBL:EDM62907.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
lipopolysaccharide cholinephosphotransferase
L3_128_361G1_scaffold_368_17
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18673..19935
DNA (1263bp) protein (421aa)
Membrane protein involved in the export of O-antigen and teichoic acid n=1 Tax=Eubacterium rectale M104/1 RepID=D4JM97_9FIRM
Membrane protein involved in the export of O-antigen and teichoic acid
Membrane protein involved in the export of O-antigen and teichoic acid {ECO:0000313|EMBL:CBK92932.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_128_361G1_scaffold_368_18
Streptococcus iniae, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19951..20949
DNA (999bp) protein (333aa)
Acyltransferase 3 n=3 Tax=Streptococcus iniae RepID=R4W0B0_STRIN
sugar acetylase
Acyltransferase {ECO:0000313|EMBL:ESR10394.1}; TaxID=1273539 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus iniae IUSA1.;"
L3_128_361G1_scaffold_368_19
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21079..21870
DNA (792bp) protein (264aa)
Uncharacterized protein n=2 Tax=Eubacterium RepID=C4Z1G1_EUBE2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA40850.1}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
L3_128_361G1_scaffold_368_20
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21897..22577
DNA (681bp) protein (227aa)
group 2 glycosyl transferase (EC:2.4.-.-)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:269 RepID=R7IXY8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE56421.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
L3_128_361G1_scaffold_368_21
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

22583..22924
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 8_2_54BFAA RepID=H1ANP6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ45894.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
hypothetical protein
L3_128_361G1_scaffold_368_22
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

22928..24826
DNA (1899bp) protein (633aa)
Uncharacterised protein {ECO:0000313|EMBL:CRH84499.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
hypothetical protein
L3_128_361G1_scaffold_368_23
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

24844..25974
DNA (1131bp) protein (377aa)
ABC transporter ATP-binding protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QBF9_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CCZ23644.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
lipopolysaccharide transport system ATP-binding protein
L3_128_361G1_scaffold_368_24
Firmicutes bacterium M10-2, Firmicutes, Bacteria

Not on your lists

25991..26764
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium M10-2 RepID=R9LNU8_9FIRM
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1235796 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium M10-2.;"
lipopolysaccharide transport system permease
L3_128_361G1_scaffold_368_25
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26774..29260
DNA (2487bp) protein (829aa)
Glycosyl transferase family protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U5G6_9FIRM
Glycosyl transferase family protein {ECO:0000313|EMBL:CCZ66371.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L3_128_361G1_scaffold_368_26
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

29299..30465
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QG76_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25314.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Predicted transcriptional regulators
L3_128_361G1_scaffold_368_27
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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30534..31412
DNA (879bp) protein (293aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
Glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
Glucose-1-phosphate thymidylyltransferase n=5 Tax=Erysipelotrichaceae RepID=B0N1U5_9FIRM
L3_128_361G1_scaffold_368_28
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

31425..31997
DNA (573bp) protein (191aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3 5-epimerase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QSV9_9FIRM
dTDP-4-dehydrorhamnose 3 5-epimerase {ECO:0000313|EMBL:CCZ25316.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L3_128_361G1_scaffold_368_29
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

32002..33021
DNA (1020bp) protein (340aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase n=4 Tax=Erysipelotrichaceae RepID=B0N1U7_9FIRM
L3_128_361G1_scaffold_368_30
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

33068..33913
DNA (846bp) protein (282aa)
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:EDS73932.1}; EC=1.1.1.133 {ECO:0000313|EMBL:EDS73932.1};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C4G1_9FIRM
Displaying items 1-30 of 39 in total

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