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L3_128_361G1_scaffold_764

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_361G1_scaffold_764_1
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(94..738)
DNA (645bp) protein (215aa)
PHP domain protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5RJG6_9CLOT
PHP domain protein {ECO:0000313|EMBL:CCZ40703.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
PHP domain-containing protein
L3_128_361G1_scaffold_764_2
Desulfotomaculum ruminis, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(741..1316)
DNA (576bp) protein (192aa)
Helix-turn-helix domain protein n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DS05_DESRL
helix-turn-helix domain-containing protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:AEG61029.1}; TaxID=696281 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 /; DL).;"
L3_128_361G1_scaffold_764_3
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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1515..2690
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GAL8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW04919.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
major facilitator superfamily protein
L3_128_361G1_scaffold_764_4
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2771..3358)
DNA (588bp) protein (196aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RZ72_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF41106.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
nitroreductase
L3_128_361G1_scaffold_764_5
[Mannheimia] succiniciproducens, Basfia, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3477..4052)
DNA (576bp) protein (192aa)
WbbJ protein n=1 Tax=Mannheimia succiniciproducens (strain MBEL55E) RepID=Q65VI6_MANSM
wbbJ; WbbJ protein
WbbJ protein {ECO:0000313|EMBL:AAU37024.1}; TaxID=221988 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Basfia.;" source="Mannheimia succiniciproducens (strain MBEL55E).;"
L3_128_361G1_scaffold_764_6
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4108..4959)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PPG7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22704.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L3_128_361G1_scaffold_764_7
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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5256..6461
DNA (1206bp) protein (402aa)
Polysaccharide deacetylase n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C5D4_9FIRM
Polysaccharide deacetylase {ECO:0000313|EMBL:EDS73878.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
yjeA; hypothetical protein
L3_128_361G1_scaffold_764_8
unknown

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6498..6620
DNA (123bp) protein (41aa)

This feature has no annotations

L3_128_361G1_scaffold_764_9
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(6926..7765)
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G8I2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW05694.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
Protein of unknown function (DUF3298).
L3_128_361G1_scaffold_764_10
Bacillus azotoformans, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(7758..8243)
DNA (486bp) protein (162aa)
RNA polymerase sigma factor SigV n=1 Tax=Bacillus azotoformans LMG 9581 RepID=K6E1S7_BACAZ
RNA polymerase sigma factor SigV {ECO:0000313|EMBL:EKN67131.1}; TaxID=1131731 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus azotoformans LMG 9581.;"
RNA polymerase sigma factor
L3_128_361G1_scaffold_764_11
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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8381..9274
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QQS8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24536.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L3_128_361G1_scaffold_764_12
unknown

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9510..9608
DNA (99bp) protein (33aa)

This feature has no annotations

L3_128_361G1_scaffold_764_13
unknown

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comp(9778..9990)
DNA (213bp) protein (71aa)

This feature has no annotations

L3_128_361G1_scaffold_764_14
Butyrivibrio fibrisolvens, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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10196..10591
DNA (396bp) protein (132aa)
D-glucuronate isomerase (EC:5.3.1.12)
Uronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013440}; EC=5.3.1.12 {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013438};; Glucuronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675}; Uronic isomerase {ECO:0000256|HAMAP-Rule:MF_00675}; TaxID=657324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio fibrisolvens 16/4.;"
Uronate isomerase n=1 Tax=Butyrivibrio fibrisolvens 16/4 RepID=D4IWB2_BUTFI
L3_128_361G1_scaffold_764_15
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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10596..10931
DNA (336bp) protein (112aa)
Uronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013440}; EC=5.3.1.12 {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013438};; Glucuronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675}; Uronic isomerase {ECO:0000256|HAMAP-Rule:MF_00675}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
Uronate isomerase n=2 Tax=Lachnospiraceae RepID=F3AIQ8_9FIRM
Glucuronate isomerase
L3_128_361G1_scaffold_764_16
Jeotgalibacillus sp. D5, Jeotgalibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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10955..11842
DNA (888bp) protein (296aa)
hypothetical protein n=1 Tax=Butyrivibrio sp. XPD2006 RepID=UPI0003B34C12
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJD92699.1}; TaxID=1508404 species="Bacteria; Firmicutes; Bacilli; Bacillales; Planococcaceae; Jeotgalibacillus.;" source="Jeotgalibacillus sp. D5.;"
L3_128_361G1_scaffold_764_17
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

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11930..13297
DNA (1368bp) protein (456aa)
MATE efflux family protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KJM7_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EGN31415.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
MATE efflux family protein
L3_128_361G1_scaffold_764_18
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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13674..14759
DNA (1086bp) protein (362aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_63FAA RepID=F3AE50_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG83934.1}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation)
L3_128_361G1_scaffold_764_19
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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14769..15617
DNA (849bp) protein (283aa)
folD; Bifunctional protein FolD, Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase (EC:1.5.1.5)
Bifunctional protein FolD n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C569_9FIRM
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
L3_128_361G1_scaffold_764_20
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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15620..15805
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GFQ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW03123.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
hypothetical protein
L3_128_361G1_scaffold_764_21
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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15890..16990
DNA (1101bp) protein (367aa)
Ribosome-binding ATPase YchF n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QDB9_9FIRM
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
50S ribosome-binding GTPase family protein
L3_128_361G1_scaffold_764_22
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

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16990..17718
DNA (729bp) protein (243aa)
SrtB family sortase n=2 Tax=Lachnospiraceae RepID=F3AEY0_9FIRM
SrtB family sortase {ECO:0000313|EMBL:CDC07663.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
sortase, SrtB family
L3_128_361G1_scaffold_764_23
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17969..19225)
DNA (1257bp) protein (419aa)
serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF356 RepID=N1ZE12_9CLOT
Tax=BJP_IG2157_Clostridiales_35_16
L3_128_361G1_scaffold_764_24
unknown

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comp(19349..19873)
DNA (525bp) protein (175aa)

This feature has no annotations

L3_128_361G1_scaffold_764_25
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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19956..20708
DNA (753bp) protein (251aa)
RNA methyltransferase, TrmH family n=5 Tax=Erysipelotrichaceae RepID=B0N1E2_9FIRM
RNA methyltransferase, TrmH family {ECO:0000313|EMBL:EDS19451.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
tRNA/rRNA methyltransferase SpoU
L3_128_361G1_scaffold_764_26
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20785..21120
DNA (336bp) protein (112aa)
Uncharacterized protein n=6 Tax=Eubacterium plexicaudatum ASF492 RepID=N2BJX2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EMZ37124.1}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
transposase IS200-family protein
L3_128_361G1_scaffold_764_27
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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21358..22530
DNA (1173bp) protein (391aa)
Aminotransferase, class I/II {ECO:0000313|EMBL:EDS19450.1}; EC=2.6.1.- {ECO:0000313|EMBL:EDS19450.1};; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
cystathionine beta-lyase (EC:4.4.1.8)
Uncharacterized protein n=1 Tax=Coprobacillus sp. D7 RepID=C3RH77_9FIRM
L3_128_361G1_scaffold_764_28
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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22677..23543
DNA (867bp) protein (289aa)
fba; fructose-bisphosphate aldolase Fba (EC:4.1.2.13)
Fructose-1,6-bisphosphate aldolase, class II n=4 Tax=Erysipelotrichaceae RepID=B0N1B8_9FIRM
Fructose-1,6-bisphosphate aldolase, class II {ECO:0000313|EMBL:EHQ45922.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
Displaying 28 items

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