ggKbase home page

L3_128_361G1_scaffold_861

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_361G1_scaffold_861_1
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

1..1110
DNA (1110bp) protein (370aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q7G5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24685.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
COMF operon protein 1
L3_128_361G1_scaffold_861_2
Catenibacterium sp. CAG:290, Catenibacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

1200..1697
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Catenibacterium sp. CAG:290 RepID=R7GLD3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE27866.1}; TaxID=1262767 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Catenibacterium; environmental samples.;" source="Catenibacterium sp. CAG:290.;"
Predicted amidophosphoribosyltransferases
L3_128_361G1_scaffold_861_3
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

1783..1980
DNA (198bp) protein (66aa)
Cold shock protein cspC n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G6C2_9FIRM
Cold shock protein cspC {ECO:0000313|EMBL:EFW06423.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
cold-shock DNA-binding domain-containing protein
L3_128_361G1_scaffold_861_4
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

2118..3539
DNA (1422bp) protein (474aa)
NlpC/P60 family domain-containing protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GCC5_9FIRM
NlpC/P60 family domain-containing protein {ECO:0000313|EMBL:EFW04134.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
hydrolase
L3_128_361G1_scaffold_861_5
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

3625..6228
DNA (2604bp) protein (868aa)
Protein translocase subunit SecA n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G6C3_9FIRM
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
preprotein translocase subunit SecA
L3_128_361G1_scaffold_861_6
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

6228..7334
DNA (1107bp) protein (369aa)
Peptide chain release factor 2 n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G6C4_9FIRM
Peptide chain release factor 2 {ECO:0000256|HAMAP-Rule:MF_00094, ECO:0000256|SAAS:SAAS00020438}; Short=RF-2 {ECO:0000256|HAMAP-Rule:MF_00094};; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
hypothetical protein
L3_128_361G1_scaffold_861_7
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

7590..8279
DNA (690bp) protein (230aa)
Cell division ATP-binding protein FtsE n=4 Tax=Erysipelotrichaceae RepID=B0N3V0_9FIRM
Cell division ATP-binding protein FtsE {ECO:0000313|EMBL:EDS19122.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
cell division ATP-binding protein FtsE
L3_128_361G1_scaffold_861_8
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

8269..9186
DNA (918bp) protein (306aa)
Cell division protein FtsX n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BYP6_9FIRM
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
ftsX; cell division protein
L3_128_361G1_scaffold_861_9
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

9198..10391
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QNB5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23681.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
NLP/P60 protein
L3_128_361G1_scaffold_861_10
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

10522..11943
DNA (1422bp) protein (474aa)
ctpB; carboxy-terminal processing protease CtpB (EC:3.4.21.102)
C-terminal processing peptidase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QQ52_9FIRM
C-terminal processing peptidase {ECO:0000313|EMBL:CCZ23122.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L3_128_361G1_scaffold_861_11
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

11963..13936
DNA (1974bp) protein (658aa)
UvrABC system protein B n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G741_9FIRM
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
Excinuclease ABC subunit B
L3_128_361G1_scaffold_861_12
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

13936..15288
DNA (1353bp) protein (451aa)
tRNA nucleotidyltransferase/poly(A) polymerase family protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q2V2_9FIRM
tRNA nucleotidyltransferase/poly(A) polymerase family protein {ECO:0000313|EMBL:CCZ23120.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
tRNA nucleotidyltransferase/poly(A) polymerase
L3_128_361G1_scaffold_861_13
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15293..18124
DNA (2832bp) protein (944aa)
UvrABC system protein A n=4 Tax=Erysipelotrichaceae RepID=B0N1P7_9FIRM
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
uvrA; excinuclease ABC subunit A
L3_128_361G1_scaffold_861_14
unknown

Not on your lists

18117..18515
DNA (399bp) protein (133aa)

This feature has no annotations

L3_128_361G1_scaffold_861_15
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18515..19459
DNA (945bp) protein (315aa)
HPr kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058411}; Short=HPrK/P {ECO:0000256|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058427};; EC=2.7.4.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058435};; HPr(Ser) kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
HPr kinase/phosphorylase n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G744_9FIRM
hprK; HPr kinase/phosphorylase
L3_128_361G1_scaffold_861_16
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

19462..20253
DNA (792bp) protein (264aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Prolipoprotein diacylglyceryl transferase n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C5C5_9FIRM
bifunctional prolipoprotein diacylglyceryl transferase/phosphatase protein
L3_128_361G1_scaffold_861_17
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

20397..21305
DNA (909bp) protein (303aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
trxB; thioredoxin reductase (EC:1.8.1.9)
Thioredoxin reductase n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C5B6_9FIRM
Displaying 17 items

View Taxonomy