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L3_129_000G1_scaffold_29

Search features with annotation key words

Displaying items 1-30 of 233 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_129_000G1_scaffold_29_1
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(92..271)
DNA (180bp) protein (60aa)
hypothetical protein n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B793BB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIZ17041.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L3_129_000G1_scaffold_29_2
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(296..475)
DNA (180bp) protein (60aa)
hypothetical protein n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B6005C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIZ16282.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L3_129_000G1_scaffold_29_3
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

753..1160
DNA (408bp) protein (136aa)
GntR family transcriptional regulator n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B40A32
GntR family transcriptional regulator
GntR family transcriptional regulator {ECO:0000313|EMBL:AIZ16281.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L3_129_000G1_scaffold_29_4
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1157..2077
DNA (921bp) protein (307aa)
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KFI78681.1}; EC=3.6.3.31 {ECO:0000313|EMBL:KFI78681.1};; TaxID=1690 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. globosum.;"
ABC transporter ATP-binding protein n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B55374
ABC transporter ATP-binding protein
L3_129_000G1_scaffold_29_5
Bifidobacterium choerinum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2074..2667
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B6DB59
Uncharacterized protein {ECO:0000313|EMBL:KFI57194.1}; TaxID=35760 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium choerinum.;"
hypothetical protein
L3_129_000G1_scaffold_29_6
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2783..3415)
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B7157F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIZ17040.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L3_129_000G1_scaffold_29_7
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3588..4760
DNA (1173bp) protein (391aa)
hypothetical protein n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B79378
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIZ17039.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L3_129_000G1_scaffold_29_8
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4781..5305)
DNA (525bp) protein (175aa)
transcriptional regulator n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B71A2E
Transcription repressor {ECO:0000313|EMBL:KFI78676.1}; TaxID=1690 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. globosum.;"
transcriptional regulator
L3_129_000G1_scaffold_29_9
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5772..7361
DNA (1590bp) protein (530aa)
ABC transporter n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B58994
ABC transporter {ECO:0000313|EMBL:AIZ16277.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
ABC transporter
L3_129_000G1_scaffold_29_10
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7408..7887
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B658D5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFI79733.1}; TaxID=31954 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. pseudolongum.;"
L3_129_000G1_scaffold_29_11
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7850..8368
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B658D5
Uncharacterized protein {ECO:0000313|EMBL:KFI78674.1}; TaxID=1690 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. globosum.;"
hypothetical protein
L3_129_000G1_scaffold_29_12
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8503..10581
DNA (2079bp) protein (693aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
thrS; threonine--tRNA ligase (EC:6.1.1.3)
threonyl-tRNA synthetase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B4718D
L3_129_000G1_scaffold_29_13
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10723..11385
DNA (663bp) protein (221aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B36B4F
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:AIZ16275.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L3_129_000G1_scaffold_29_14
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11389..12411
DNA (1023bp) protein (341aa)
lauroyl acyltransferase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B72F9F
lauroyl acyltransferase
Lauroyl acyltransferase {ECO:0000313|EMBL:AIZ16274.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L3_129_000G1_scaffold_29_15
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12585..13631
DNA (1047bp) protein (349aa)
glycosyl transferase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B32957
glycosyl transferase
Glycosyl transferase {ECO:0000313|EMBL:AIZ16273.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L3_129_000G1_scaffold_29_16
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13695..14450
DNA (756bp) protein (252aa)
transcriptional regulator n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B4F6E9
transcriptional regulator
Probable transcriptional regulatory protein AH67_04440 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L3_129_000G1_scaffold_29_17
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14459..15040
DNA (582bp) protein (194aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=31954 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. pseudolongum.;"
Holliday junction resolvase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B36615
Holliday junction resolvase
L3_129_000G1_scaffold_29_18
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15082..15705
DNA (624bp) protein (208aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
Holliday junction DNA helicase RuvA n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B5E0AB
ATP-dependent DNA helicase RuvA
L3_129_000G1_scaffold_29_19
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15711..16790
DNA (1080bp) protein (360aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
Holliday junction DNA helicase RuvB n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B6FF84
ATP-dependent DNA helicase RuvB
L3_129_000G1_scaffold_29_20
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16850..17272
DNA (423bp) protein (141aa)
preprotein translocase subunit YajC n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B72A1A
preprotein translocase subunit YajC
Preprotein translocase subunit YajC {ECO:0000313|EMBL:AIZ16268.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L3_129_000G1_scaffold_29_21
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17296..17877
DNA (582bp) protein (194aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084255};; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
adenine phosphoribosyltransferase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B79290
adenine phosphoribosyltransferase
L3_129_000G1_scaffold_29_22
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17916..19112
DNA (1197bp) protein (399aa)
succinate--CoA ligase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B78F44
succinyl-CoA synthetase subunit beta
Succinyl-CoA synthetase subunit beta {ECO:0000313|EMBL:AIZ16266.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L3_129_000G1_scaffold_29_23
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19109..20023
DNA (915bp) protein (305aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=31954 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. pseudolongum.;"
succinyl-CoA synthetase subunit alpha n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B5D1A7
succinate--CoA ligase
L3_129_000G1_scaffold_29_24
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20023..21405
DNA (1383bp) protein (461aa)
permease n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B3B670
permease
Permease {ECO:0000313|EMBL:AIZ16264.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L3_129_000G1_scaffold_29_25
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21356..22987
DNA (1632bp) protein (544aa)
purH; phosphoribosylaminoimidazolecarboxamide formyltransferase (EC:2.1.2.3 3.5.4.10)
IMP cyclohydrolase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B57CE7
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=31954 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. pseudolongum.;"
L3_129_000G1_scaffold_29_26
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23034..23324
DNA (291bp) protein (97aa)
Uncharacterized protein n=4 Tax=Bifidobacterium animalis subsp. lactis RepID=I6PUF8_BIFAN
Rod shape-determining protein RodA {ECO:0000313|EMBL:KFI78659.1}; TaxID=1690 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. globosum.;"
hypothetical protein
L3_129_000G1_scaffold_29_27
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23283..24254)
DNA (972bp) protein (324aa)
Membrane channel protein n=1 Tax=Bifidobacterium animalis subsp. animalis (strain ATCC 25527 / DSM 20104 / JCM 1190 / R101-8) RepID=I1W9T3_BIFAR
Membrane channel protein {ECO:0000313|EMBL:KFI78658.1}; TaxID=1690 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. globosum.;"
glycerol transporter
L3_129_000G1_scaffold_29_28
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24414..25187
DNA (774bp) protein (258aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
RNA pseudouridine synthase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B77CD3
pseudouridine synthase
L3_129_000G1_scaffold_29_29
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25184..27325
DNA (2142bp) protein (714aa)
cytidylate kinase (EC:2.7.4.14)
cytidylate kinase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B34D76
GTPase Der {ECO:0000256|SAAS:SAAS00038180}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L3_129_000G1_scaffold_29_30
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27716..29143
DNA (1428bp) protein (476aa)
UTP--glucose-1-phosphate uridylyltransferase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B35662
UTP--glucose-1-phosphate uridylyltransferase
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000313|EMBL:AIZ16259.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
Displaying items 1-30 of 233 in total

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