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L3_129_000G1_scaffold_44

Search features with annotation key words

Displaying items 1-30 of 171 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_129_000G1_scaffold_44_1
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..163
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=U6Q4A8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EJZ50491.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
Integrase catalytic region
L3_129_000G1_scaffold_44_2
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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474..602
DNA (129bp) protein (43aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=U6Q443_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EJZ50421.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
L3_129_000G1_scaffold_44_3
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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839..2578
DNA (1740bp) protein (580aa)
Potassium-transporting ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00275};; ATP phosphohydrolase [potassium-transporting] A chain {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-binding and translocating subunit A {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-translocating ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
kdpA; potassium-transporting ATPase subunit A (EC:3.6.3.12)
Potassium-transporting ATPase A chain n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HC28_9CLOT
L3_129_000G1_scaffold_44_4
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2595..4661
DNA (2067bp) protein (689aa)
Potassium-transporting ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00285};; ATP phosphohydrolase [potassium-transporting] B chain {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-binding and translocating subunit B {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-translocating ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
kdpB; potassium-transporting ATPase subunit B (EC:3.6.3.12)
Potassium-transporting ATPase B chain n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2B3_9CLOT
L3_129_000G1_scaffold_44_5
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4677..5267
DNA (591bp) protein (197aa)
Potassium-transporting ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00276};; ATP phosphohydrolase [potassium-transporting] C chain {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-binding and translocating subunit C {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-translocating ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
kdpC; potassium-transporting ATPase subunit C (EC:3.6.3.12)
K+-transporting ATPase, C subunit n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H1R6_9CLOT
L3_129_000G1_scaffold_44_6
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5327..8032
DNA (2706bp) protein (902aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
kdpD; sensor histidine kinase KdpD (EC:2.7.3.-)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H6D7_9CLOT
L3_129_000G1_scaffold_44_7
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8007..8705
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HEI6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96601.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
kdpE; DNA-binding response regulator KdpE
L3_129_000G1_scaffold_44_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8945..10354)
DNA (1410bp) protein (470aa)
6-phospho-beta-glucosidase {ECO:0000313|EMBL:CDS84271.1}; EC=3.2.1.86 {ECO:0000313|EMBL:CDS84271.1};; Aryl-phospho-beta-D-glucosidase BglC {ECO:0000313|EMBL:CDS84710.1}; EC=3.2.1.86 {ECO:0000313|EMBL:CDS84710.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
6-phospho-beta-glucosidase (EC:3.2.1.86)
Aryl-phospho-beta-D-glucosidase BglC n=12 Tax=Clostridium difficile RepID=T2TPJ6_CLODI
L3_129_000G1_scaffold_44_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10502..11881)
DNA (1380bp) protein (460aa)
PTS system, beta-glucoside-specific IIABC component family protein {ECO:0000313|EMBL:EQF26541.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EQF26541.1};; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
PTS system, beta-glucoside-specific IIABC component family protein n=1 Tax=Clostridium difficile CD160 RepID=T3DJC6_CLODI
PTS system transporter subunit IIABC
L3_129_000G1_scaffold_44_10
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12409..13857
DNA (1449bp) protein (483aa)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
inosine 5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2B6_9CLOT
L3_129_000G1_scaffold_44_11
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14222..15763
DNA (1542bp) protein (514aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008788}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
guaA; GMP synthase (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H1R7_9CLOT
L3_129_000G1_scaffold_44_12
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15857..16585)
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H6D8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96605.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
Transcriptional regulator, RpiR family
L3_129_000G1_scaffold_44_13
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17022..17807
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HEJ2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96606.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
Cellobiose phosphotransferase system YdjC-like protein
L3_129_000G1_scaffold_44_14
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17876..19438
DNA (1563bp) protein (521aa)
PTS system, maltose and glucose-specific IIC component (EC:2.7.1.69)
PTS system, glucose-like IIB component n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HC37_9CLOT
PTS system, glucose-like IIB component {ECO:0000313|EMBL:EEH96607.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
L3_129_000G1_scaffold_44_15
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19493..20818
DNA (1326bp) protein (442aa)
Maltose-6'-phosphate glucosidase (EC:3.2.1.122)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2B8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96608.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
L3_129_000G1_scaffold_44_16
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21157..22782
DNA (1626bp) protein (542aa)
Putative transcriptional regulator, AraC family n=1 Tax=Clostridium sp. D5 RepID=F0Z0I1_9CLOT
Putative transcriptional regulator, AraC family {ECO:0000313|EMBL:EGB92602.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
L3_129_000G1_scaffold_44_17
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22779..24575
DNA (1797bp) protein (599aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Predicted signal transduction protein with a C-terminal ATPase domain (EC:2.7.13.3)
Putative Two-component sensor kinase YesM n=1 Tax=Clostridium sp. D5 RepID=F0Z0I2_9CLOT
L3_129_000G1_scaffold_44_18
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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24565..25569
DNA (1005bp) protein (335aa)
Sugar-binding domain protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CXB1_9CLOT
Sugar-binding domain protein {ECO:0000313|EMBL:ERI71926.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
ABC-type sugar transport system, periplasmic component
L3_129_000G1_scaffold_44_19
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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25751..27244
DNA (1494bp) protein (498aa)
Monosaccharide-transporting ATPase {ECO:0000256|SAAS:SAAS00041637}; EC=3.6.3.17 {ECO:0000256|SAAS:SAAS00041637};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-) (EC:3.6.3.17)
Ribose transport ATP-binding protein rbsa n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EP55_9FIRM
L3_129_000G1_scaffold_44_20
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

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27262..28287
DNA (1026bp) protein (342aa)
monosaccharide-transporting ATPase (EC:3.6.3.17)
Ribose transport system permease n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K4M7_9FIRM
Ribose transport system permease {ECO:0000313|EMBL:EGN43521.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
L3_129_000G1_scaffold_44_21
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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28302..29369
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2B184_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI71929.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
periplasmic binding protein/LacI transcriptional regulator
L3_129_000G1_scaffold_44_22
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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29449..29877
DNA (429bp) protein (143aa)
RbsD/FucU transport family protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDQ5_9CLOT
RbsD/FucU transport family protein {ECO:0000313|EMBL:EEG30402.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
RbsD or FucU transport protein
L3_129_000G1_scaffold_44_23
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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29879..30649
DNA (771bp) protein (257aa)
Cof-like hydrolase n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XQV2_9CLOT
cof family hydrolase
Cof-like hydrolase {ECO:0000313|EMBL:ENY98011.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
L3_129_000G1_scaffold_44_24
Firmicutes bacterium CAG:882, Firmicutes, Bacteria

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30771..31532
DNA (762bp) protein (254aa)
Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases n=1 Tax=Firmicutes bacterium CAG:882 RepID=R7BJ63_9FIRM
Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases {ECO:0000313|EMBL:CDD65825.1}; TaxID=1262991 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:882.;"
class II aldolase/adducin family protein
L3_129_000G1_scaffold_44_25
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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31546..34068
DNA (2523bp) protein (841aa)
glycerol dehydratase, cobalamin-independent, large subunit (EC:2.3.1.54 4.2.1.30)
Formate C-acetyltransferase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QHD0_9CLOT
Formate C-acetyltransferase {ECO:0000313|EMBL:EKY27419.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
L3_129_000G1_scaffold_44_26
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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34084..34875
DNA (792bp) protein (264aa)
glycyl-radical enzyme activating protein family (EC:1.97.1.4)
Putative pyruvate formate-lyase 1-activating enzyme n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QIC4_9CLOT
Putative pyruvate formate-lyase 1-activating enzyme {ECO:0000313|EMBL:EKY27420.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
L3_129_000G1_scaffold_44_27
Firmicutes bacterium CAG:882, Firmicutes, Bacteria

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34900..35268
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:882 RepID=R7BJZ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD65827.1}; TaxID=1262991 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:882.;"
hypothetical protein
L3_129_000G1_scaffold_44_28
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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35273..35695
DNA (423bp) protein (141aa)
Ethanolamine/propanediol utilization protein PduV3 n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LGX2_ACEWD
pduV3; ethanolamine/propanediol utilization protein PduV3
Ethanolamine/propanediol utilization protein PduV3 {ECO:0000313|EMBL:AFA49636.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
L3_129_000G1_scaffold_44_29
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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35722..36534
DNA (813bp) protein (271aa)
Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases (EC:4.1.2.17)
L-fuculose-phosphate aldolase n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N2AIE7_9FIRM
L-fuculose-phosphate aldolase {ECO:0000313|EMBL:EMZ27831.1}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
L3_129_000G1_scaffold_44_30
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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36559..37035
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TVF6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67284.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Uncharacterized protein, possibly involved in utilization of glycolate and propanediol
Displaying items 1-30 of 171 in total

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