ggKbase home page

L3_129_000G1_scaffold_52

Search features with annotation key words

Displaying items 1-30 of 274 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_129_000G1_scaffold_52_1
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(179..343)
DNA (165bp) protein (55aa)
thymidylate kinase (EC:2.7.4.9)
Uncharacterized protein n=2 Tax=Clostridium RepID=D3AAQ3_9CLOT
Spermatogeneis-associated protein 20 {ECO:0000313|EMBL:CCZ62775.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
L3_129_000G1_scaffold_52_2
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(529..906)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9X8P2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY92061.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
hypothetical protein
L3_129_000G1_scaffold_52_3
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(926..1504)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9WX16_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY92062.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
hypothetical protein
L3_129_000G1_scaffold_52_4
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1501..2073)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9X817_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY92063.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
GCN5-like N-acetyltransferase
L3_129_000G1_scaffold_52_5
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2353..2925)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VNK8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY92064.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
adenine phosphoribosyltransferase
L3_129_000G1_scaffold_52_6
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2941..3999)
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VN26_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY92065.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
xanthine/uracil permease
L3_129_000G1_scaffold_52_7
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4178..5053
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9X8P7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY92066.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
LysR family transcriptional regulator
L3_129_000G1_scaffold_52_8
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5125..5634)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KG29_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN34435.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
putative Fe-S oxidoreductase
L3_129_000G1_scaffold_52_9
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5640..5843)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CXZ8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG56046.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
hypothetical protein
L3_129_000G1_scaffold_52_10
unknown

Not on your lists

comp(5905..6216)
DNA (312bp) protein (104aa)

This feature has no annotations

L3_129_000G1_scaffold_52_11
unknown

Not on your lists

comp(6218..6682)
DNA (465bp) protein (155aa)

This feature has no annotations

L3_129_000G1_scaffold_52_12
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(6728..7618)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RG51_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC47853.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
hypothetical protein
L3_129_000G1_scaffold_52_13
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7823..9397)
DNA (1575bp) protein (525aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5ING9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43620.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L3_129_000G1_scaffold_52_14
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(9407..11008)
DNA (1602bp) protein (534aa)
Type I restriction modification DNA specificity domain protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RXT3_9FIRM
Type I restriction modification DNA specificity domain protein {ECO:0000313|EMBL:CDC47851.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
restriction modification system DNA specificity subunit
L3_129_000G1_scaffold_52_15
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(11005..12522)
DNA (1518bp) protein (506aa)
Type I restriction enzyme M protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RJB1_9FIRM
Type I restriction enzyme M protein {ECO:0000313|EMBL:CDC47850.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
N-6 DNA methylase
L3_129_000G1_scaffold_52_16
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12838..13488)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EMK1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ59245.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L3_129_000G1_scaffold_52_17
unknown

Not on your lists

14439..14762
DNA (324bp) protein (108aa)

This feature has no annotations

L3_129_000G1_scaffold_52_18
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14673..15728)
DNA (1056bp) protein (352aa)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8RH74_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP19497.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
hypothetical protein
L3_129_000G1_scaffold_52_19
Clostridium sp. CAG:306, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15715..17553)
DNA (1839bp) protein (613aa)
Uncharacterized protein n=1 Tax=Bacteroides salyersiae WAL 10018 = DSM 18765 = JCM 12988 RepID=R0JCQ7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDC21810.1}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:306.;"
hypothetical protein
L3_129_000G1_scaffold_52_20
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17713..19080)
DNA (1368bp) protein (456aa)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Clostridium hathewayi 12489931 RepID=N9X824_9CLOT
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:ENY92068.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
TrmA family RNA methyltransferase
L3_129_000G1_scaffold_52_21
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19427..21112)
DNA (1686bp) protein (562aa)
ATP-dependent RNA helicase DeaD n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VNL5_9CLOT
ATP-dependent RNA helicase DeaD {ECO:0000313|EMBL:ENY92069.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
DEAD/DEAH box helicase
L3_129_000G1_scaffold_52_22
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21303..22448)
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VN34_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY92070.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
L3_129_000G1_scaffold_52_23
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22765..23214
DNA (450bp) protein (150aa)
Transcriptional regulator, MarR family n=2 Tax=Clostridium RepID=D3AAM7_9CLOT
Putative MarR protein {ECO:0000313|EMBL:CCZ62743.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
MarR family transcriptional regulator
L3_129_000G1_scaffold_52_24
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23201..24493
DNA (1293bp) protein (431aa)
MATE efflux family protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9WX28_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:ENY92072.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
hypothetical protein
L3_129_000G1_scaffold_52_25
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24620..25267
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9X831_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY92073.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
type 11 methyltransferase
L3_129_000G1_scaffold_52_26
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25489..26256)
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VNM1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY92074.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
hypothetical protein
L3_129_000G1_scaffold_52_27
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26272..26961)
DNA (690bp) protein (230aa)
Two-component system response regulator n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VN40_9CLOT
Two-component system response regulator {ECO:0000313|EMBL:ENY92075.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
winged helix family two component transcriptional regulator
L3_129_000G1_scaffold_52_28
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26958..28454)
DNA (1497bp) protein (499aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Clostridium hathewayi 12489931 RepID=N9X8R0_9CLOT
integral membrane sensor signal transduction histidine kinase
L3_129_000G1_scaffold_52_29
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28560..29210)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9WX33_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY92077.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
L3_129_000G1_scaffold_52_30
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29232..29894)
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9X839_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY92078.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
Displaying items 1-30 of 274 in total

View Taxonomy